APOBEC3F 15688

Name: APOBEC3F	Sequence: fasta or formatted (373aa)		NCBI GI: 22907044
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F isoform a		Referenced in: Additional Host Defense Functions RNA Editing and Other RNA Modifications
Other entries for this name: alt prot [101aa] apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like ...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 21 2 C cysteine 4.0 15 1 D aspartate 4.6 17 2 E glutamate 7.5 28 2 F phenylalanine 7.8 29 1 G glycine 3.2 12 1 H histidine 3.2 12 2 I isoleucine 2.9 11 1 K lysine 5.1 19 1 L leucine 7.5 28 1 M methionine 2.4 9 1 N asparagine 5.1 19 1 P proline 5.4 20 1 Q glutamine 2.7 10 1 R arginine 6.7 25 2 S serine 5.6 21 1 T threonine 4.6 17 1 V valine 5.1 19 2 W tryptophan 4.0 15 1 Y tyrosine 7.0 26 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3D 0.759 apolipoprotein B mRNA editing enzyme, catalytic pol... APOBEC3B 0.525 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3G 0.430 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3C 0.374 apolipoprotein B mRNA editing enzyme, catalytic poly... AICDA 0.149 activation-induced cytidine deaminase APOBEC3F 0.128 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3A 0.122 phorbolin 1 APOBEC2 0.118 apolipoprotein B mRNA editing enzyme, catalytic polyp... APOBEC3H 0.109 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC1 0.079 apolipoprotein B mRNA editing enzyme APOBEC4 0.009 apolipoprotein B F5 0.005 coagulation factor V precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.