APOBEC3G 3291

Name: APOBEC3G	Sequence: fasta or formatted (384aa)		NCBI GI: 13399304
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G		Referenced in: Additional Host Defense Functions RNA Editing and Other RNA Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 15 1 C cysteine 3.9 15 1 D aspartate 5.7 22 2 E glutamate 6.2 24 1 F phenylalanine 7.0 27 2 G glycine 3.6 14 1 H histidine 4.2 16 1 I isoleucine 3.9 15 1 K lysine 5.2 20 1 L leucine 8.3 32 2 M methionine 2.9 11 1 N asparagine 4.2 16 2 P proline 5.2 20 2 Q glutamine 4.4 17 1 R arginine 7.8 30 2 S serine 5.2 20 1 T threonine 5.5 21 1 V valine 3.9 15 1 W tryptophan 3.6 14 1 Y tyrosine 5.2 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3B 0.502 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3F 0.419 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3D 0.311 apolipoprotein B mRNA editing enzyme, catalytic pol... APOBEC3A 0.271 phorbolin 1 APOBEC3C 0.155 apolipoprotein B mRNA editing enzyme, catalytic poly... AICDA 0.154 activation-induced cytidine deaminase APOBEC3F 0.121 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3H 0.100 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC2 0.081 apolipoprotein B mRNA editing enzyme, catalytic polyp... APOBEC1 0.077 apolipoprotein B mRNA editing enzyme APOBEC4 0.009 apolipoprotein B THSD7B 0.005 thrombospondin, type I, domain containing 7B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.