APOBEC3H 26030

Name: APOBEC3H	Sequence: fasta or formatted (183aa)		NCBI GI: 33147089
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H		Referenced in: Additional Host Defense Functions RNA Editing and Other RNA Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 9 1 C cysteine 5.5 10 1 D aspartate 3.3 6 1 E glutamate 7.1 13 2 F phenylalanine 5.5 10 1 G glycine 3.8 7 1 H histidine 2.7 5 1 I isoleucine 3.8 7 1 K lysine 7.7 14 3 L leucine 10.9 20 2 M methionine 2.2 4 1 N asparagine 4.9 9 2 P proline 5.5 10 1 Q glutamine 4.9 9 2 R arginine 7.1 13 2 S serine 5.5 10 2 T threonine 4.4 8 1 V valine 3.3 6 1 W tryptophan 2.2 4 1 Y tyrosine 4.9 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3F 0.236 apolipoprotein B mRNA editing enzyme, catalytic poly... AICDA 0.228 activation-induced cytidine deaminase APOBEC3G 0.222 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3C 0.222 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3D 0.220 apolipoprotein B mRNA editing enzyme, catalytic pol... APOBEC3B 0.195 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3A 0.195 phorbolin 1 APOBEC1 0.125 apolipoprotein B mRNA editing enzyme APOBEC2 0.111 apolipoprotein B mRNA editing enzyme, catalytic polyp... FZD9 0.016 frizzled 9 SEMA5B 0.011 semaphorin 5B isoform 1 TNFRSF11A 0.008 tumor necrosis factor receptor superfamily, member 11... PCM1 0.008 pericentriolar material 1 IFNA8 0.008 interferon, alpha 8 DIAPH3 0.005 diaphanous homolog 3 isoform b DIAPH3 0.005 diaphanous homolog 3 isoform a IFNA17 0.005 interferon, alpha 17 IFNA21 0.005 interferon, alpha 21 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.