APOBEC1 34041

Name: APOBEC1	Sequence: fasta or formatted (236aa)		NCBI GI: 61743957
Description: apolipoprotein B mRNA editing enzyme		Referenced in: RNA Editing and Other RNA Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 8 1 C cysteine 3.4 8 1 D aspartate 3.0 7 1 E glutamate 5.5 13 1 F phenylalanine 4.7 11 2 G glycine 3.8 9 1 H histidine 5.1 12 1 I isoleucine 6.4 15 2 K lysine 3.4 8 2 L leucine 9.7 23 2 M methionine 3.0 7 2 N asparagine 3.8 9 1 P proline 7.2 17 2 Q glutamine 3.8 9 2 R arginine 8.1 19 3 S serine 7.6 18 2 T threonine 5.1 12 2 V valine 4.2 10 1 W tryptophan 5.1 12 1 Y tyrosine 3.8 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein B mRNA editing enzyme APOBEC3B 0.134 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3G 0.128 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3F 0.128 apolipoprotein B mRNA editing enzyme, catalytic poly... AICDA 0.124 activation-induced cytidine deaminase APOBEC3D 0.120 apolipoprotein B mRNA editing enzyme, catalytic pol... APOBEC3C 0.118 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3H 0.093 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3A 0.093 phorbolin 1 APOBEC2 0.079 apolipoprotein B mRNA editing enzyme, catalytic polyp... APOBEC4 0.012 apolipoprotein B MKRN2 0.010 makorin ring finger protein 2 KLHL21 0.008 kelch-like 21 GAL3ST4 0.006 galactose-3-O-sulfotransferase 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.