PAPOLB 36269

Name: PAPOLB	Sequence: fasta or formatted (637aa)		NCBI GI: 77874206
Description: poly(A) polymerase beta (testis specific)		Referenced in: Polyadenylation Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 38 1 C cysteine 1.4 9 1 D aspartate 4.2 27 2 E glutamate 7.2 46 5 F phenylalanine 4.2 27 2 G glycine 3.8 24 2 H histidine 2.5 16 2 I isoleucine 6.4 41 2 K lysine 5.2 33 2 L leucine 11.5 73 2 M methionine 2.5 16 2 N asparagine 4.6 29 2 P proline 6.4 41 3 Q glutamine 4.2 27 3 R arginine 4.9 31 2 S serine 8.9 57 3 T threonine 5.5 35 2 V valine 7.1 45 2 W tryptophan 1.4 9 1 Y tyrosine 2.0 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 poly(A) polymerase beta (testis specific) PAPOLA 0.838 poly(A) polymerase alpha PAPOLG 0.592 poly(A) polymerase gamma POU2F1 0.010 POU class 2 homeobox 1 STK10 0.008 serine/threonine kinase 10 CDH23 0.008 cadherin-like 23 isoform 1 precursor SCG3 0.007 secretogranin III EFCAB5 0.006 EF-hand calcium binding domain 5 isoform b EFCAB5 0.006 EF-hand calcium binding domain 5 isoform a SP3 0.006 Sp3 transcription factor isoform 2 SP3 0.006 Sp3 transcription factor isoform 1 EPC1 0.006 enhancer of polycomb 1 CCDC7 0.006 coiled-coil domain containing 7 CCDC7 0.006 coiled-coil domain containing 7 NSUN3 0.006 NOL1/NOP2/Sun domain family, member 3 STAC2 0.005 SH3 and cysteine rich domain 2 LOC100131251 0.005 PREDICTED: hypothetical protein LOC100131251 0.005 PREDICTED: hypothetical protein SALL2 0.005 sal-like 2 C14orf145 0.005 hypothetical protein LOC145508 CNNM2 0.005 cyclin M2 isoform 3 CNNM2 0.005 cyclin M2 isoform 2 CNNM2 0.005 cyclin M2 isoform 1 GABBR1 0.004 gamma-aminobutyric acid (GABA) B receptor 1 isoform... GABBR1 0.004 gamma-aminobutyric acid (GABA) B receptor 1 isoform ... GABBR1 0.004 gamma-aminobutyric acid (GABA) B receptor 1 isoform ... RANBP9 0.004 RAN binding protein 9 RELA 0.004 v-rel reticuloendotheliosis viral oncogene homolog ... RELA 0.004 v-rel reticuloendotheliosis viral oncogene homolog ... SHANK1 0.004 SH3 and multiple ankyrin repeat domains 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.