Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 100913021
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|100913021 BCL2-like 12 isoform 3 [Homo sapiens]
(333 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|100913021 BCL2-like 12 isoform 3 [Homo sapiens] 686 0.0
gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens] 681 0.0
gi|239753746 PREDICTED: similar to BCL2-like 12 [Homo sapiens] 337 7e-93
gi|239748229 PREDICTED: hypothetical protein XP_002346597 [Homo ... 337 7e-93
gi|239742130 PREDICTED: hypothetical protein XP_002342439 [Homo ... 337 9e-93
gi|21040330 BCL2-like 14 isoform 1 [Homo sapiens] 43 3e-04
gi|21040328 BCL2-like 14 isoform 1 [Homo sapiens] 43 3e-04
gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens] 42 0.001
gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens] 42 0.001
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 39 0.005
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 39 0.005
gi|60460889 Myb protein P42POP [Homo sapiens] 38 0.011
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 38 0.014
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 37 0.019
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 37 0.025
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 37 0.025
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 36 0.042
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 35 0.072
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 35 0.072
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 35 0.093
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 35 0.093
gi|71999153 hypothetical protein LOC23334 [Homo sapiens] 35 0.093
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 35 0.093
gi|208431817 protein kinase-like protein SgK493 [Homo sapiens] 35 0.12
gi|149393140 hypothetical protein LOC84067 isoform 1 [Homo sapiens] 35 0.12
gi|7657577 SHP2-interacting transmembrane adaptor protein [Homo ... 34 0.16
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 34 0.16
gi|203096856 kinesin family member 7 [Homo sapiens] 34 0.16
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 34 0.16
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 34 0.16
>gi|100913021 BCL2-like 12 isoform 3 [Homo sapiens]
Length = 333
Score = 686 bits (1770), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 60
MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
Sbjct: 1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 60
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPS 120
VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPS
Sbjct: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPS 120
Query: 121 PAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQR 180
PAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQR
Sbjct: 121 PAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQR 180
Query: 181 LEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRL 240
LEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRL
Sbjct: 181 LEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRL 240
Query: 241 SSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGLS 300
SSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGLS
Sbjct: 241 SSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGLS 300
Query: 301 VEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 333
VEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD
Sbjct: 301 VEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 333
>gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens]
Length = 334
Score = 681 bits (1758), Expect = 0.0
Identities = 333/334 (99%), Positives = 333/334 (99%), Gaps = 1/334 (0%)
Query: 1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 60
MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
Sbjct: 1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 60
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP- 119
VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP
Sbjct: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 120
Query: 120 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 179
SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
Sbjct: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
Query: 180 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 239
RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
Sbjct: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 240
Query: 240 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 299
LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL
Sbjct: 241 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 300
Query: 300 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 333
SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD
Sbjct: 301 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 334
>gi|239753746 PREDICTED: similar to BCL2-like 12 [Homo sapiens]
Length = 218
Score = 337 bits (865), Expect = 7e-93
Identities = 185/257 (71%), Positives = 190/257 (73%), Gaps = 47/257 (18%)
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP- 119
V V+WRR QVE RR +WGP GASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVP PP
Sbjct: 4 VGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPR 63
Query: 120 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 179
SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP SLPIRPCYG EPGPATPDFYALVAQ
Sbjct: 64 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQ 123
Query: 180 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 239
RLEQ QEQLKSPP SK +
Sbjct: 124 RLEQ--QEQLKSPP-----------------------------------------SKRIS 140
Query: 240 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 299
L+S FARLVELFCSR+DSSRPSRACPG PPPS EP LALAMELSRRVA LG T AGL
Sbjct: 141 LASGFFARLVELFCSREDSSRPSRACPGSPPPSQEP---LALAMELSRRVAELGDTRAGL 197
Query: 300 SVEHVHSFTPWIQAHGG 316
SVEH HS TPWIQAHGG
Sbjct: 198 SVEHAHSLTPWIQAHGG 214
>gi|239748229 PREDICTED: hypothetical protein XP_002346597 [Homo
sapiens]
Length = 218
Score = 337 bits (865), Expect = 7e-93
Identities = 185/257 (71%), Positives = 190/257 (73%), Gaps = 47/257 (18%)
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP- 119
V V+WRR QVE RR +WGP GASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVP PP
Sbjct: 4 VGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPR 63
Query: 120 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 179
SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP SLPIRPCYG EPGPATPDFYALVAQ
Sbjct: 64 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQ 123
Query: 180 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 239
RLEQ QEQLKSPP SK +
Sbjct: 124 RLEQ--QEQLKSPP-----------------------------------------SKRIS 140
Query: 240 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 299
L+S FARLVELFCSR+DSSRPSRACPG PPPS EP LALAMELSRRVA LG T AGL
Sbjct: 141 LASGFFARLVELFCSREDSSRPSRACPGSPPPSQEP---LALAMELSRRVAELGDTRAGL 197
Query: 300 SVEHVHSFTPWIQAHGG 316
SVEH HS TPWIQAHGG
Sbjct: 198 SVEHAHSLTPWIQAHGG 214
>gi|239742130 PREDICTED: hypothetical protein XP_002342439 [Homo
sapiens]
Length = 218
Score = 337 bits (864), Expect = 9e-93
Identities = 185/257 (71%), Positives = 190/257 (73%), Gaps = 47/257 (18%)
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP- 119
V V+WRR QVE RR +WGP GASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVP PP
Sbjct: 4 VGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPR 63
Query: 120 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 179
S AQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP SLPIRPCYG EPGPATPDFYALVAQ
Sbjct: 64 SHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQ 123
Query: 180 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 239
RLEQ QEQLKSPP SK +
Sbjct: 124 RLEQ--QEQLKSPP-----------------------------------------SKRIS 140
Query: 240 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 299
L+S FARLVELFCSR+DSSRPSRACPGPPPPS EP LALAMELSRRVA LG T AGL
Sbjct: 141 LASGFFARLVELFCSREDSSRPSRACPGPPPPSQEP---LALAMELSRRVAELGDTRAGL 197
Query: 300 SVEHVHSFTPWIQAHGG 316
SVEH HS TPWIQAHGG
Sbjct: 198 SVEHAHSLTPWIQAHGG 214
>gi|21040330 BCL2-like 14 isoform 1 [Homo sapiens]
Length = 327
Score = 43.1 bits (100), Expect = 3e-04
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 16/137 (11%)
Query: 195 PELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLV--ELF 252
P E+E IL ++V LL+ + + +KL D AL S S + + ++
Sbjct: 195 PVASSSKKDEEEQILAKIVELLKYSGDQLERKLKKDKALMGHFQDGLSYSVFKTITDQVL 254
Query: 253 CSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGG----TLAGLSVEHV-HSF 307
D G + AL ++++ ++ + + G +++ +F
Sbjct: 255 MGVDPRGESEVKAQG---------FKAALVIDVTAKLTAIDNHPMNRVLGFGTKYLKENF 305
Query: 308 TPWIQAHGGWEGILAVS 324
+PWIQ HGGWE IL +S
Sbjct: 306 SPWIQQHGGWEKILGIS 322
>gi|21040328 BCL2-like 14 isoform 1 [Homo sapiens]
Length = 327
Score = 43.1 bits (100), Expect = 3e-04
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 16/137 (11%)
Query: 195 PELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLV--ELF 252
P E+E IL ++V LL+ + + +KL D AL S S + + ++
Sbjct: 195 PVASSSKKDEEEQILAKIVELLKYSGDQLERKLKKDKALMGHFQDGLSYSVFKTITDQVL 254
Query: 253 CSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGG----TLAGLSVEHV-HSF 307
D G + AL ++++ ++ + + G +++ +F
Sbjct: 255 MGVDPRGESEVKAQG---------FKAALVIDVTAKLTAIDNHPMNRVLGFGTKYLKENF 305
Query: 308 TPWIQAHGGWEGILAVS 324
+PWIQ HGGWE IL +S
Sbjct: 306 SPWIQQHGGWEKILGIS 322
>gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens]
Length = 309
Score = 41.6 bits (96), Expect = 0.001
Identities = 35/100 (35%), Positives = 43/100 (43%), Gaps = 23/100 (23%)
Query: 118 PPSPAQEEPTDFLSRLRRCLP-CSLGRGAAPSESP---------------RPCSLPIRPC 161
PP PA+ +SRLRRC CS GRG SP P +LP P
Sbjct: 111 PPGPAE------VSRLRRCRKRCSEGRGPTTPFSPPPPADVTCFPVEEASAPATLPASPA 164
Query: 162 YGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPP 201
LEPG ++P F L+ Q + + PSPE Q P
Sbjct: 165 GRLEPGLSSP-FSDLLGPLGAQADEAGCSAQPSPERQPSP 203
>gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens]
Length = 309
Score = 41.6 bits (96), Expect = 0.001
Identities = 35/100 (35%), Positives = 43/100 (43%), Gaps = 23/100 (23%)
Query: 118 PPSPAQEEPTDFLSRLRRCLP-CSLGRGAAPSESP---------------RPCSLPIRPC 161
PP PA+ +SRLRRC CS GRG SP P +LP P
Sbjct: 111 PPGPAE------VSRLRRCRKRCSEGRGPTTPFSPPPPADVTCFPVEEASAPATLPASPA 164
Query: 162 YGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPP 201
LEPG ++P F L+ Q + + PSPE Q P
Sbjct: 165 GRLEPGLSSP-FSDLLGPLGAQADEAGCSAQPSPERQPSP 203
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 39.3 bits (90), Expect = 0.005
Identities = 38/113 (33%), Positives = 46/113 (40%), Gaps = 22/113 (19%)
Query: 79 PGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP--SPAQEEPTDFLSRLRRC 136
PGP A A S +R R L AAG+P P PP +PA E P R
Sbjct: 724 PGPAAPPAPSPAAPVRTRRRRKLYEL----HAAGAPPPPPPGHAPAPESP-------RPG 772
Query: 137 LPCSLGRGAAPSESPRPCS--------LPIRPCYGLEPGPATPDFYALVAQRL 181
G G AP+ SP P + P RP G P PA D++ A R+
Sbjct: 773 SGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPG-APAPALADYHECTACRV 824
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 39.3 bits (90), Expect = 0.005
Identities = 58/225 (25%), Positives = 83/225 (36%), Gaps = 37/225 (16%)
Query: 80 GPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPSPAQEEPTDFLSRLRRCLPC 139
GP A GS +D+ V +A L + P P P P + EP + +
Sbjct: 1031 GPRAQSPGSPLHARGQDSWPVSSALLSK-----RPAPQRPPPPKREPRRYRATDGAPADA 1085
Query: 140 SLGRGAAPSESPRPCSLPIRPC-YGLEPGPA---------TPDFYALVAQRLEQLVQEQL 189
+G P +P P SL + L P+ TP A V +R Q V
Sbjct: 1086 PVGVLGRPFPTPSPASLDVYVARLSLSHSPSVFSSAQPQDTPK--ATVCERGSQHVSGDA 1143
Query: 190 KSPPSPELQGPPSTEKEAILRRLVALLEEEA----EVINQKLASDPAL------RSKLVR 239
S P PE PP K+ LR A +E + QKL P L +++ R
Sbjct: 1144 -SRPLPEALLPP---KQQHLRLQTATMETSRSPSPQFAPQKLTDKPPLLIQDEDSTRIER 1199
Query: 240 LSSDSFA------RLVELFCSRDDSSRPSRACPGPPPPSPEPLAR 278
+ ++ ++V + SR S ACP PP P L +
Sbjct: 1200 VMDNNTTVKMVPIKIVHSESQPEKESRQSLACPAEPPALPHGLEK 1244
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 38.1 bits (87), Expect = 0.011
Identities = 42/144 (29%), Positives = 56/144 (38%), Gaps = 13/144 (9%)
Query: 139 CSLGRGAAPS----ESPRPCSL-PIR-PCYGLEPGPATPDFYALVAQRLEQLVQEQLKSP 192
C+ G P ESP P +L P++ P L P P P L Q+ P
Sbjct: 187 CTPQEGGCPRPKERESPPPSALQPVQLPRLALSPPPPAPPLPP--PPPLAQVAPSPPSPP 244
Query: 193 PSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLVELF 252
P P + PP+ + +E A I + + LR L +LS A L L
Sbjct: 245 PPP--RPPPTLSASDPSLDFLRAQQETANAIRELAGT---LRQGLAKLSEALSALLPLLP 299
Query: 253 CSRDDSSRPSRACPGPPPPSPEPL 276
+ DS P P PPPP P P+
Sbjct: 300 GTPVDSLPPPLPPPPPPPPPPRPV 323
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 37.7 bits (86), Expect = 0.014
Identities = 39/105 (37%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 147 PSESPRPCSLPI-RPCYGLEPGPA-TPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTE 204
PS+ P PCS P P P PA TP Q L +P SP L GPPS
Sbjct: 2488 PSQIP-PCSSPACTPPPACTPPPAHTPP-----------PAQTCLVTPSSPLLLGPPSVP 2535
Query: 205 KEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLV 249
A + L L EAE+ Q LAS +L V S S LV
Sbjct: 2536 ISASVTNLPLGLRPEAELCAQALASPESLELASVASSETSSLSLV 2580
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 37.4 bits (85), Expect = 0.019
Identities = 44/134 (32%), Positives = 53/134 (39%), Gaps = 35/134 (26%)
Query: 78 GPGPGASMAGSEELG----LREDTLRVLAA--FLRRGEAAGSPVPTPPSPAQEEPTDFLS 131
G GPGA+M E+ RE ++L RR A + P PP P Q P
Sbjct: 9 GSGPGAAMGDCAEIKSQFRTREGFYKLLPGDGAARRSGPASAQTPVPPQPPQPPPG---- 64
Query: 132 RLRRCLPCSL-GRGAA-PSESPRPCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQL 189
P S G GAA P+ SP P G PGPA P A RL + +L
Sbjct: 65 ------PASASGPGAAGPASSPPPA--------GPGPGPALP------AVRLSLV---RL 101
Query: 190 KSPPSPELQGPPST 203
P S PP+T
Sbjct: 102 GEPDSAGAGEPPAT 115
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 37.0 bits (84), Expect = 0.025
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 164 LEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVI 223
L P T D + + LE L++E+ G EKE ++ R+ ++ EE+ ++
Sbjct: 1932 LNKSPKTRD---IQEEELEVLLEEEAAG-------GDEDREKEILIERIQSIKEEKEDIT 1981
Query: 224 NQKLASDP--ALRSKLVRLSSDSFARLVELFCSRDDSS---RPSRACPGPPPPSPEP 275
+ DP + L +S S L+E R S P+ CPG P PSP P
Sbjct: 1982 YRLPELDPRGSDEENLDSETSASTESLLEERAGRGASEGPPAPALPCPGAPTPSPLP 2038
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 37.0 bits (84), Expect = 0.025
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 110 AAGSPVPTPP----SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLE 165
A +P P PP SPA+ EP + R SL R A +P + L
Sbjct: 673 APEAPEPEPPPADDSPAEPEPR----AVGRTNHLSLPRFAPVVTTPVKAEVSPHGAPALS 728
Query: 166 PGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEK 205
GP T Q L+ + Q PP P+LQ PPS ++
Sbjct: 729 NGPQTQAQLLQPLQALQTQLLPQALPPPQPQLQPPPSPQQ 768
Score = 32.7 bits (73), Expect = 0.46
Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 15/135 (11%)
Query: 78 GPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPSPAQEEPTDFLS------ 131
GP P + ++ L +V GE PV PP P PT S
Sbjct: 2178 GPAPEPPKPATSKIILVNKLGQVFVKMAGEGEPVPPPVKQPPLPPTISPTAPTSWTLPPG 2237
Query: 132 RLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKS 191
L LP AP P P +L L GPA+P A+ R++++ +S
Sbjct: 2238 PLLGVLPVVGVVRPAPPPPPPPLTLV------LSSGPASPPRQAI---RVKRVSTFSGRS 2288
Query: 192 PPSPELQGPPSTEKE 206
PP+P P +++
Sbjct: 2289 PPAPPPYKAPRLDED 2303
Score = 28.5 bits (62), Expect = 8.7
Identities = 35/124 (28%), Positives = 47/124 (37%), Gaps = 11/124 (8%)
Query: 108 GEAAGSPVPTPPSPAQ---EEPT----DFLSRLRRCL-PCSLGRGAAPSESPRPCSLPIR 159
G + P+P+P SP+ PT DF + RR P L PS P P++
Sbjct: 1878 GGVSFGPLPSPGSPSSLTHHIPTVGDPDFPAPPRRSRRPSPLAPRPPPSRWASP---PLK 1934
Query: 160 PCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEE 219
L P T AL E SPP PE GP + E + A L+
Sbjct: 1935 TSPQLRVPPPTSVVTALTPTSGELAPPGPAPSPPPPEDLGPDFEDMEVVSGLSAADLDFA 1994
Query: 220 AEVI 223
A ++
Sbjct: 1995 ASLL 1998
>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
Length = 841
Score = 36.2 bits (82), Expect = 0.042
Identities = 59/256 (23%), Positives = 92/256 (35%), Gaps = 61/256 (23%)
Query: 46 PGPVRRRGKVELIKFVRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRV-LAAF 104
PGP R G + L + R G+ +AG ++G +E+ + + +
Sbjct: 182 PGPSPRGGNLPLQRLTR-------------------GSRVAGDPDVGAQEEPVYIEMVGD 222
Query: 105 LRRGEA------AGSPV----PTPPSPAQ---EEPTDFLSRLRRCLPCSLGRGAAPSESP 151
+ RG AG P+ PTPP+ A EE ++ LP G G A P
Sbjct: 223 VFRGGGRSGGGLAGPPLGGGGPTPPAGADSDSEESEAIYEEMKYPLPEEAGEGRANGPPP 282
Query: 152 RPCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAILRR 211
+ P + + L P AL ++R + + +P PP
Sbjct: 283 LTATSPPQQPHALPPHAHRRPASALPSRR------DGTPTKTTPCEIPPPFPN------- 329
Query: 212 LVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLVELFCSRDDSSR------PSRAC 265
LL+ ++ A + R D +RL L S++ + P+R
Sbjct: 330 ---LLQHRPPLLAFPQAKSAS------RTPGDGVSRLPVLCHSKEPAGSTPAPQVPARER 380
Query: 266 PGPPPPSPEPLARLAL 281
PPPP P P A L L
Sbjct: 381 ETPPPPPPPPAANLLL 396
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 35.4 bits (80), Expect = 0.072
Identities = 43/153 (28%), Positives = 49/153 (32%), Gaps = 35/153 (22%)
Query: 31 RAPSVPPFLRWAGYRPGPVRRRGKVELIKFVRVQWRRPQVEWRRRRWGPGPGASMAGSEE 90
R P + AG R G R R QV R R WGPG G +G
Sbjct: 428 RNPGAAARAKLAGQRAGRARAR-------------TGSQVGSRGRGWGPGAGRVPSGGRR 474
Query: 91 -LGLREDTLRVLAAFLRRGEAAGSPVPT-----------PPSPAQEEPTDFLSRLRRCLP 138
+G E R G A +P P+ P + EP R
Sbjct: 475 GVGNPE----------RWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGR 524
Query: 139 CSLGRGAAPSESPRPCSLPIRPCYGLEPGPATP 171
G GA PS P P P G PGP TP
Sbjct: 525 VGKGPGAPPSALPGPRPRPDSLSPGEPPGPPTP 557
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 35.4 bits (80), Expect = 0.072
Identities = 43/153 (28%), Positives = 49/153 (32%), Gaps = 35/153 (22%)
Query: 31 RAPSVPPFLRWAGYRPGPVRRRGKVELIKFVRVQWRRPQVEWRRRRWGPGPGASMAGSEE 90
R P + AG R G R R QV R R WGPG G +G
Sbjct: 428 RNPGAAARAKLAGQRAGRARAR-------------TGSQVGSRGRGWGPGAGRVPSGGRR 474
Query: 91 -LGLREDTLRVLAAFLRRGEAAGSPVPT-----------PPSPAQEEPTDFLSRLRRCLP 138
+G E R G A +P P+ P + EP R
Sbjct: 475 GVGNPE----------RWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGR 524
Query: 139 CSLGRGAAPSESPRPCSLPIRPCYGLEPGPATP 171
G GA PS P P P G PGP TP
Sbjct: 525 VGKGPGAPPSALPGPRPRPDSLSPGEPPGPPTP 557
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 35.0 bits (79), Expect = 0.093
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 189 LKSP-PSPELQGPPSTEKEAILRRLVALLEEEAEVINQKL----ASDPALRSKLVRLSSD 243
L SP P E GPPST +EA L+ + L+EEEA ++ +K+ + L+++L L D
Sbjct: 567 LDSPLPKGEAGGPPST-REAELKLRLRLVEEEANILGRKIVELEVENRGLKAELDDLRGD 625
Query: 244 SF 245
F
Sbjct: 626 DF 627
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 35.0 bits (79), Expect = 0.093
Identities = 64/234 (27%), Positives = 76/234 (32%), Gaps = 43/234 (18%)
Query: 73 RRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSP--------VPTPPSPAQE 124
RR G GP A+ A G R LA R G G P +P P
Sbjct: 144 RRLPGGRGPAAAFAVEPGTGQRPRNTS-LAQASRSGTVPGLPPASLQPLRLPYLAPPGPH 202
Query: 125 EPTDF-LSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQRLEQ 183
+PT RL C P PS P P R + L P P V RL
Sbjct: 203 DPTSRGPGRLLTCEP--------PSRKLPPPLPPCRSRWVLAPPPT-------VRPRLRV 247
Query: 184 LVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVI---NQKLASDPALRSKLVRL 240
L PE + + A+L VA L E + + S P L
Sbjct: 248 LTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHP--------L 299
Query: 241 SSDSFARLVELFCSRDDSSRPSRACPGPPPPSPE-------PLARLALAMELSR 287
SS+ A FCS D RP P P P + L R ALA+ R
Sbjct: 300 SSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPR 353
>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
Length = 2533
Score = 35.0 bits (79), Expect = 0.093
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 140 SLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQG 199
+LG A + P P +P PGP PDF+ L+ + L+ V+ + G
Sbjct: 985 TLGEKAPFTLRTPPGPAPPQPSLSGLPGPCLPDFW-LIVRVLQDRVEVYAHARSLIREDG 1043
Query: 200 PPSTEKEAILRRLVALLEEEAEVINQKLA-----SDPALRSKLVRLSSDSFARLVELFCS 254
P TE + + LV + E +NQ+L S LV S + R F S
Sbjct: 1044 GPGTECRHLQQLLVRRVGEICREVNQRLLLQDLHDSHVCNSLLVAESEEDLWRSETPFHS 1103
Query: 255 RDDSSRPS 262
R + PS
Sbjct: 1104 RQRAPLPS 1111
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 35.0 bits (79), Expect = 0.093
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 23/135 (17%)
Query: 101 LAAFLRRGEAAGSPVPTPPSP------AQEEPTDFLSRLRRCLPCSLGRGA----APSES 150
LA F G A+ P PP P A P L+ P + G+ AP
Sbjct: 1558 LALFNGSGRASPPSTPPPPPPPPGPPPAPYRPCAHLAFPPEPAPVNAGKAGPSAEAPKVH 1617
Query: 151 PRPCSLPIR-PCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAIL 209
P+P S P+ PC P +P + A R + SPP+P PPS+
Sbjct: 1618 PKPNSAPVAGPCSSFPKIPYSP----VKATRADARKAGSSASPPAP--YSPPSS------ 1665
Query: 210 RRLVALLEEEAEVIN 224
R L + L+E A + N
Sbjct: 1666 RPLSSPLDELASLFN 1680
Score = 31.6 bits (70), Expect = 1.0
Identities = 60/208 (28%), Positives = 74/208 (35%), Gaps = 31/208 (14%)
Query: 108 GEAAGSPVPTPPSPAQEEPTDFLSRLRRCLPCSLGRGAAP-----SESPRPCSLPIRPCY 162
G AA P P EE ++ CLP G GA + P P
Sbjct: 1417 GHAARPDSPDPGESVYEE-------MKCCLPDDGGPGAGSFLLHGASPPLLHRAPEDEAA 1469
Query: 163 GLEPGPAT---PDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEA--ILRRLVALLE 217
G PG A P F L+ R LV PP+P P S E + + + +LE
Sbjct: 1470 G-PPGDACDIPPPFPNLLPHRPPLLV-----FPPTPVTCSPASDESPLTPLEVKKLPVLE 1523
Query: 218 EEAEVINQKLASDPALR--SKLVRLSSDSFARL-VELFCSRDDSSRPSRACPGPPPPSP- 273
+ Q S P SK + D A + LF +S PS P PPPP P
Sbjct: 1524 TNLKYPVQPEGSSPLSPQYSKSQKGDGDRPASPGLALFNGSGRASPPSTPPPPPPPPGPP 1583
Query: 274 ----EPLARLALAMELSRRVAGLGGTLA 297
P A LA E + AG G A
Sbjct: 1584 PAPYRPCAHLAFPPEPAPVNAGKAGPSA 1611
>gi|208431817 protein kinase-like protein SgK493 [Homo sapiens]
Length = 493
Score = 34.7 bits (78), Expect = 0.12
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 46 PGPVRRRGKVELIKFVRVQWRRPQVEWRRRRWGPGPGA 83
PGP RR G+ EL + +R ++ Q R R GPGPGA
Sbjct: 45 PGPGRRGGRGELARQIRARYEEVQ---RYSRGGPGPGA 79
>gi|149393140 hypothetical protein LOC84067 isoform 1 [Homo sapiens]
Length = 986
Score = 34.7 bits (78), Expect = 0.12
Identities = 45/154 (29%), Positives = 52/154 (33%), Gaps = 47/154 (30%)
Query: 14 FLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKFVRVQWRRPQVEWR 73
FL P C RH +P P WA R GP R G+ E I
Sbjct: 453 FLSLIPRCC--RHHA--PSPPRPEHASWA--RGGPSRETGRREDIT-------------- 492
Query: 74 RRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPSPAQEEPTDFLSRL 133
GPG + + S R T LA FLR+ GS P P
Sbjct: 493 ----GPGSPSVDSSSVTTVPRPSTPSRLALFLRQQSLGGSESPGP--------------- 533
Query: 134 RRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPG 167
PCS G A+P+ SP RP EPG
Sbjct: 534 ---APCSPGLSASPASSPGR-----RPTPAEEPG 559
Score = 32.7 bits (73), Expect = 0.46
Identities = 63/248 (25%), Positives = 84/248 (33%), Gaps = 47/248 (18%)
Query: 80 GPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPSPAQEEPTDFLSRLRRCLPC 139
G MAG E G LR L L G PP P +EE C
Sbjct: 677 GISEGMAGLEGFG---QELRELEVALSNGGTGSESPLEPPLPLEEEEA------YESFTC 727
Query: 140 SLGRGAAPSESPRP-CSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQE----------- 187
P E P P S P+R L P T F A++ +LE ++Q
Sbjct: 728 -------PPEPPGPFLSSPLRTLNQLPSQPFTGPFMAVLFAKLENMLQNSVYVNFLLTGL 780
Query: 188 --QLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSF 245
QL P P L+ + +LL+ V N K+ + A + L S +
Sbjct: 781 VAQLACHPQPLLRSFLLNTNMVFQPSVKSLLQVLGSVKN-KIENFAASQEDFPALLSKAK 839
Query: 246 ARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGLSVEHVH 305
L+ +R GP P +PL + SRR +L L + H H
Sbjct: 840 KYLI----ARGKLDWAEGPAAGPAPRRSDPLVK-------SRR-----PSLGELLLRHAH 883
Query: 306 SFTPWIQA 313
S T QA
Sbjct: 884 SPTRARQA 891
>gi|7657577 SHP2-interacting transmembrane adaptor protein [Homo
sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.16
Identities = 50/178 (28%), Positives = 67/178 (37%), Gaps = 31/178 (17%)
Query: 53 GKVELIKFVRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAG 112
G V L+ + + Q R R PG G S EE+ L + +L+ G +
Sbjct: 49 GAVTLLFLISLAAHLSQWTRGRSRSHPGQGRSGESVEEVPLYGNL-----HYLQTGRLSQ 103
Query: 113 SPVPTPPSPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP-CSLPIRPCYGLEPGPATP 171
P P Q++PT LG A +E SL +RP G PGP TP
Sbjct: 104 DP-----EPDQQDPT-------------LGGPARAAEEVMCYTSLQLRPPQGRIPGPGTP 145
Query: 172 DFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLAS 229
Y+ V E Q S P PEL + RR A ++A +Q AS
Sbjct: 146 VKYSEVVLDSEPKSQ---ASGPEPELYASVCAQ----TRRARASFPDQAYANSQPAAS 196
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 34.3 bits (77), Expect = 0.16
Identities = 54/184 (29%), Positives = 69/184 (37%), Gaps = 25/184 (13%)
Query: 83 ASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPSPAQEEPTDFLSRLRRCLPCSLG 142
A+ A + ELGLR A L E A V + AQ L LR L LG
Sbjct: 1393 AARAEAAELGLRLSAAEGRAQGLE-AELARVEVQRRAAEAQ------LGGLRSALRRGLG 1445
Query: 143 RGAAPSESPRPC-SLPIR--PCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQG 199
G APS +PRP P R P G G +P LE Q SP
Sbjct: 1446 LGRAPSPAPRPVPGSPARDAPAEGSGEGLNSP-------STLECSPGSQPPSPGPATSPA 1498
Query: 200 PPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLVELFCSRDDSS 259
P + EA+ L L+E L S R +L +S +L E+ RD ++
Sbjct: 1499 SPDLDPEAVRGALREFLQE--------LRSAQRERDELRTQTSALNRQLAEMEAERDSAT 1550
Query: 260 RPSR 263
+R
Sbjct: 1551 SRAR 1554
>gi|203096856 kinesin family member 7 [Homo sapiens]
Length = 1343
Score = 34.3 bits (77), Expect = 0.16
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 181 LEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRL 240
L+Q +++ L+ + E G ++EAIL + AL++E+ + +++L S AL +VR+
Sbjct: 915 LDQEMEKVLQQRRALEELGEELHKREAILAKKEALMQEKTGLESKRLRSSQALNEDIVRV 974
Query: 241 SS 242
SS
Sbjct: 975 SS 976
Score = 29.3 bits (64), Expect = 5.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 186 QEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSF 245
Q QL+ ELQ + RR VA + + +V+ +K + +LV LS+ S
Sbjct: 763 QRQLRELEGKELQDAGERSRLQEFRRRVAAAQSQVQVLKEKKQA----TERLVSLSAQSE 818
Query: 246 ARLVEL 251
RL EL
Sbjct: 819 KRLQEL 824
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
Length = 170
Score = 34.3 bits (77), Expect = 0.16
Identities = 39/121 (32%), Positives = 46/121 (38%), Gaps = 18/121 (14%)
Query: 100 VLAAFLRRGEAAGSPVP--TPPSPA-QEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSL 156
+LA L R AA SP P PP PA E T + R C P A P E P L
Sbjct: 21 LLAWLLVRRGAAASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGL 80
Query: 157 -----PIRPCYGLEPGPATPDFYALVAQRLEQLV------QEQLKSPPSPELQGPPSTEK 205
P P G GP P A A+ EQ V ++ L P +GP +
Sbjct: 81 GELGEPAGP--GEPEGPGDP--AAAPAEAEEQAVEARQEEEQDLDGEKGPSSEGPEEEDG 136
Query: 206 E 206
E
Sbjct: 137 E 137
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]
Length = 177
Score = 34.3 bits (77), Expect = 0.16
Identities = 39/121 (32%), Positives = 46/121 (38%), Gaps = 18/121 (14%)
Query: 100 VLAAFLRRGEAAGSPVP--TPPSPA-QEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSL 156
+LA L R AA SP P PP PA E T + R C P A P E P L
Sbjct: 21 LLAWLLVRRGAAASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGL 80
Query: 157 -----PIRPCYGLEPGPATPDFYALVAQRLEQLV------QEQLKSPPSPELQGPPSTEK 205
P P G GP P A A+ EQ V ++ L P +GP +
Sbjct: 81 GELGEPAGP--GEPEGPGDP--AAAPAEAEEQAVEARQEEEQDLDGEKGPSSEGPEEEDG 136
Query: 206 E 206
E
Sbjct: 137 E 137
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.138 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,875,156
Number of Sequences: 37866
Number of extensions: 1114756
Number of successful extensions: 8687
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 250
Number of HSP's that attempted gapping in prelim test: 8017
Number of HSP's gapped (non-prelim): 951
length of query: 333
length of database: 18,247,518
effective HSP length: 103
effective length of query: 230
effective length of database: 14,347,320
effective search space: 3299883600
effective search space used: 3299883600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.