Guide to the Human Genome
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Name: RIN2 Sequence: fasta or formatted (895aa) NCBI GI: 18466802
Description:

Ras and Rab interactor 2

Referenced in:

Rab
Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         49           2
 C cysteine            2.0         18           1
 D aspartate           4.9         44           2
 E glutamate           7.7         69           3
 F phenylalanine       4.0         36           2
 G glycine             5.8         52           2
 H histidine           2.3         21           1
 I isoleucine          4.1         37           2
 K lysine              6.3         56           3
 L leucine            10.6         95           3
 M methionine          2.9         26           2
 N asparagine          3.0         27           2
 P proline             7.6         68           4
 Q glutamine           4.5         40           2
 R arginine            5.3         47           2
 S serine              9.1         81           3
 T threonine           6.3         56           2
 V valine              4.8         43           2
 W tryptophan          0.7          6           1
 Y tyrosine            2.7         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras and Rab interactor 2 
RIN3                  0.167   Ras and Rab interactor 3 
RIN1                  0.118   ras inhibitor RIN1 
RINL                  0.047   Ras and Rab interactor-like 
RABGEF1               0.019   RAB guanine nucleotide exchange factor (GEF) 1 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
MICALL1               0.012   molecule interacting with Rab13 
ANKRD27               0.012   ankyrin repeat domain 27 (VPS9 domain) 
C9orf75               0.012   hypothetical protein LOC286262 isoform 2 
C9orf75               0.012   hypothetical protein LOC286262 isoform 1 
C16orf7               0.012   chromosome 16 open reading frame 7 
GAPVD1                0.012   GTPase activating protein and VPS9 domains 1 
MUPCDH                0.012   mucin and cadherin-like isoform 1 
ARHGAP17              0.011   nadrin isoform 1 
ARHGAP17              0.011   nadrin isoform 2 
PHLDB1                0.011   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.011   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.011   pleckstrin homology-like domain, family B, member 1 ...
SFPQ                  0.011   splicing factor proline/glutamine rich (polypyrimidin...
KDM6B                 0.011   lysine (K)-specific demethylase 6B 
PRB1                  0.011   proline-rich protein BstNI subfamily 1 isoform 1 pre...
YLPM1                 0.011   YLP motif containing 1 
GRB14                 0.011   growth factor receptor-bound protein 14 
PRB1                  0.010   proline-rich protein BstNI subfamily 1 isoform 3 pre...
PRB1                  0.010   proline-rich protein BstNI subfamily 1 isoform 2 pre...
LOC100133142          0.010   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.010   PREDICTED: similar to zinc finger protein 208 [Homo...
PLEKHG5               0.010   pleckstrin homology domain containing family G membe...
PLEKHG5               0.010   pleckstrin homology domain containing family G memb...
PLEKHG5               0.010   pleckstrin homology domain containing family G memb...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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