Guide to the Human Genome
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Name: RINL Sequence: fasta or formatted (452aa) NCBI GI: 38348206
Description:

Ras and Rab interactor-like

Referenced in:

Rab
Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         45           2
 C cysteine            0.7          3           1
 D aspartate           6.6         30           2
 E glutamate           8.6         39           5
 F phenylalanine       1.3          6           1
 G glycine             7.5         34           2
 H histidine           4.4         20           2
 I isoleucine          2.0          9           1
 K lysine              2.2         10           2
 L leucine            12.8         58           3
 M methionine          0.4          2           1
 N asparagine          1.1          5           1
 P proline            10.2         46           3
 Q glutamine           4.4         20           2
 R arginine            9.5         43           3
 S serine              4.9         22           2
 T threonine           5.1         23           2
 V valine              4.9         22           1
 W tryptophan          1.5          7           1
 Y tyrosine            1.8          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras and Rab interactor-like 
RIN3                  0.116   Ras and Rab interactor 3 
RIN2                  0.092   Ras and Rab interactor 2 
RIN1                  0.069   ras inhibitor RIN1 
CHGA                  0.021   chromogranin A precursor 
LOC100292369          0.015   PREDICTED: hypothetical protein 
LOC100290869          0.015   PREDICTED: hypothetical protein XP_002347120 
LOC100289412          0.015   PREDICTED: hypothetical protein XP_002344281 
HS6ST3                0.014   PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [...
HS6ST3                0.014   heparan sulfate 6-O-sulfotransferase 3 
ZFPM1                 0.013   zinc finger protein, multitype 1 
CHIC1                 0.013   cysteine-rich hydrophobic domain 1 
MXRA7                 0.013   transmembrane anchor protein 1 isoform 3 
MXRA7                 0.013   transmembrane anchor protein 1 isoform 2 
MXRA7                 0.013   transmembrane anchor protein 1 isoform 1 
LOC375295             0.012   PREDICTED: hypothetical protein LOC375295 
LOC375295             0.012   PREDICTED: hypothetical protein LOC375295 
LOC375295             0.012   PREDICTED: hypothetical protein 
KBTBD11               0.012   kelch repeat and BTB (POZ) domain containing 11 [Homo...
GJC2                  0.012   gap junction protein, gamma 2, 47kDa 
ZNF496                0.011   zinc finger protein 496 
MRVI1                 0.011   JAW1-related protein isoform a 
MRVI1                 0.011   JAW1-related protein isoform c 
MRVI1                 0.011   JAW1-related protein isoform b 
MRVI1                 0.011   JAW1-related protein isoform b 
DAXX                  0.011   death-domain associated protein isoform a 
DAXX                  0.011   death-domain associated protein isoform a 
DAXX                  0.011   death-domain associated protein isoform b 
PSD                   0.011   pleckstrin and Sec7 domain containing 
C11orf42              0.011   hypothetical protein LOC160298 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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