GAPVD1 31798

Name: GAPVD1	Sequence: fasta or formatted (1487aa)		NCBI GI: 51093832
Description: GTPase activating protein and VPS9 domains 1		Referenced in: Rab
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 107 3 C cysteine 1.7 26 2 D aspartate 6.9 103 2 E glutamate 7.9 117 2 F phenylalanine 3.2 48 1 G glycine 4.5 67 2 H histidine 2.0 29 2 I isoleucine 4.5 67 2 K lysine 4.8 71 3 L leucine 10.7 159 3 M methionine 2.4 36 2 N asparagine 3.7 55 1 P proline 5.5 82 3 Q glutamine 5.2 77 2 R arginine 6.2 92 2 S serine 10.0 148 5 T threonine 5.0 75 2 V valine 5.7 85 2 W tryptophan 0.7 11 2 Y tyrosine 2.2 32 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 GTPase activating protein and VPS9 domains 1 RABGEF1 0.021 RAB guanine nucleotide exchange factor (GEF) 1 RIN3 0.011 Ras and Rab interactor 3 IQGAP3 0.009 IQ motif containing GTPase activating protein 3 [Hom... IQGAP2 0.009 IQ motif containing GTPase activating protein 2 [Ho... ANKRD27 0.008 ankyrin repeat domain 27 (VPS9 domain) IQGAP1 0.008 IQ motif containing GTPase activating protein 1 [Homo... NF1 0.008 neurofibromin isoform 2 IWS1 0.008 IWS1 homolog RIN2 0.007 Ras and Rab interactor 2 RASA1 0.007 RAS p21 protein activator 1 isoform 1 RASA1 0.007 RAS p21 protein activator 1 isoform 2 C16orf7 0.007 chromosome 16 open reading frame 7 BAT2D1 0.005 HBxAg transactivated protein 2 SETD1B 0.005 SET domain containing 1B DAB2IP 0.005 disabled homolog 2 interacting protein isoform 2 [Ho... DAB2IP 0.005 disabled homolog 2 interacting protein isoform 1 [Ho... DSPP 0.005 dentin sialophosphoprotein preproprotein NOLC1 0.005 nucleolar and coiled-body phosphoprotein 1 RIN1 0.005 ras inhibitor RIN1 PNN 0.005 pinin, desmosome associated protein PSD 0.005 pleckstrin and Sec7 domain containing NF1 0.004 neurofibromin isoform 1 ELL 0.004 elongation factor RNA polymerase II SYNGAP1 0.004 synaptic Ras GTPase activating protein 1 C17orf85 0.004 ELG protein isoform b C17orf85 0.004 ELG protein isoform a KIAA0774 0.004 hypothetical protein LOC23281 isoform a MAP7D1 0.004 MAP7 domain containing 1 CIC 0.004 capicua homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.