Guide to the Human Genome
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Name: SDHA Sequence: fasta or formatted (664aa) NCBI GI: 156416003
Description:

succinate dehydrogenase complex, subunit A, flavoprotein precursor

Referenced in:

TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         59           2
 C cysteine            2.7         18           3
 D aspartate           5.1         34           1
 E glutamate           6.0         40           2
 F phenylalanine       3.3         22           1
 G glycine            10.4         69           2
 H histidine           3.3         22           2
 I isoleucine          4.2         28           1
 K lysine              4.4         29           2
 L leucine             8.6         57           2
 M methionine          2.3         15           1
 N asparagine          3.0         20           1
 P proline             3.9         26           2
 Q glutamine           3.6         24           2
 R arginine            6.6         44           2
 S serine              5.9         39           1
 T threonine           6.0         40           1
 V valine              7.1         47           3
 W tryptophan          0.9          6           1
 Y tyrosine            3.8         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   succinate dehydrogenase complex, subunit A, flavopr... 
LOC100134108          0.140   PREDICTED: similar to succinate dehydrogenase compl...
PYROXD2               0.006   pyridine nucleotide-disulphide oxidoreductase domai...
TXNRD1                0.006   thioredoxin reductase 1 isoform 2 
TXNRD1                0.006   thioredoxin reductase 1 isoform 3 
TXNRD1                0.006   thioredoxin reductase 1 isoform 1 
TXNRD1                0.006   thioredoxin reductase 1 isoform 2 
TXNRD1                0.006   thioredoxin reductase 1 isoform 2 
PID1                  0.005   phosphotyrosine interaction domain containing 1 iso...
PID1                  0.005   phosphotyrosine interaction domain containing 1 isof...
ITCH                  0.005   itchy homolog E3 ubiquitin protein ligase 
ACSL6                 0.005   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL6                 0.005   acyl-CoA synthetase long-chain family member 6 isofo...
MTRR                  0.005   methionine synthase reductase isoform 1 
MTRR                  0.005   methionine synthase reductase isoform 2 
MTO1                  0.005   mitochondrial translation optimization 1 homolog is...
MTO1                  0.005   mitochondrial translation optimization 1 homolog iso...
MTO1                  0.005   mitochondrial translation optimization 1 homolog iso...
DLD                   0.004   dihydrolipoamide dehydrogenase precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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