Guide to the Human Genome
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Name: PYROXD2 Sequence: fasta or formatted (581aa) NCBI GI: 229577391
Description:

pyridine nucleotide-disulphide oxidoreductase domain 2

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         60           3
 C cysteine            1.9         11           1
 D aspartate           4.6         27           1
 E glutamate           5.2         30           2
 F phenylalanine       3.8         22           1
 G glycine             9.0         52           3
 H histidine           3.4         20           2
 I isoleucine          3.8         22           2
 K lysine              3.6         21           2
 L leucine            11.7         68           3
 M methionine          2.8         16           1
 N asparagine          2.1         12           1
 P proline             7.1         41           2
 Q glutamine           4.3         25           1
 R arginine            5.3         31           2
 S serine              6.0         35           2
 T threonine           4.8         28           2
 V valine              6.5         38           2
 W tryptophan          0.9          5           1
 Y tyrosine            2.9         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pyridine nucleotide-disulphide oxidoreductase domai... 
RETSAT                0.024   all-trans-13,14-dihydroretinol saturase 
GSR                   0.012   glutathione reductase 
MAOA                  0.010   monoamine oxidase A 
DLD                   0.010   dihydrolipoamide dehydrogenase precursor 
MAOB                  0.010   monoamine oxidase B 
AOF1                  0.009   amine oxidase (flavin containing) domain 1 
KDM1                  0.009   amine oxidase (flavin containing) domain 2 isoform a...
KDM1                  0.009   amine oxidase (flavin containing) domain 2 isoform b...
FOXRED2               0.008   FAD-dependent oxidoreductase domain containing 2 [H...
FOXRED2               0.008   FAD-dependent oxidoreductase domain containing 2 [H...
SDHA                  0.007   succinate dehydrogenase complex, subunit A, flavopr...
MTO1                  0.007   mitochondrial translation optimization 1 homolog is...
MTO1                  0.007   mitochondrial translation optimization 1 homolog iso...
MTO1                  0.007   mitochondrial translation optimization 1 homolog iso...
IL4I1                 0.006   interleukin 4 induced 1 isoform 1 precursor 
IL4I1                 0.006   interleukin 4 induced 1 isoform 2 
KLF13                 0.005   Kruppel-like factor 13 
DPYD                  0.004   dihydropyrimidine dehydrogenase isoform 1 
LOC100293567          0.004   PREDICTED: hypothetical protein 
LOC100291230          0.004   PREDICTED: hypothetical protein XP_002347504 
LOC100287446          0.004   PREDICTED: hypothetical protein XP_002343323 
TXNRD2                0.004   thioredoxin reductase 2 precursor 
LOC283486             0.004   PREDICTED: hypothetical protein LOC283486 
IL31                  0.004   interleukin 31 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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