LOC646079 20534

Name: LOC646079	Sequence: fasta or formatted (224aa)		NCBI GI: 239750776
Description: PREDICTED: similar to breast cancer anti-estrogen resistance 1		Referenced in: Mammary Tissues Non-Receptor Tyrosine Kinase Pathways
Other entries for this name: alt prot [368aa] PREDICTED: similar to breast cancer anti-estrogen resistance 1 alt prot [232aa] PREDICTED: similar to breast cancer anti-estrogen resistance 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 16 2 C cysteine 0.4 1 1 D aspartate 4.5 10 1 E glutamate 1.8 4 1 F phenylalanine 1.8 4 1 G glycine 8.5 19 2 H histidine 3.6 8 2 I isoleucine 2.2 5 1 K lysine 4.5 10 2 L leucine 7.1 16 1 M methionine 2.7 6 1 N asparagine 2.2 5 1 P proline 16.5 37 2 Q glutamine 8.9 20 2 R arginine 2.2 5 1 S serine 8.0 18 2 T threonine 5.4 12 1 V valine 6.7 15 1 W tryptophan 1.8 4 2 Y tyrosine 4.0 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to breast cancer anti-estrogen r... LOC646079 0.941 PREDICTED: similar to breast cancer anti-estrogen r... LOC646079 0.941 PREDICTED: similar to breast cancer anti-estrogen r... LOC100133063 0.932 PREDICTED: similar to breast cancer anti-estrogen r... BCAR1 0.919 breast cancer anti-estrogen resistance 1 NEDD9 0.240 neural precursor cell expressed, developmentally down... NEDD9 0.236 neural precursor cell expressed, developmentally do... NEDD9 0.220 neural precursor cell expressed, developmentally dow... EFS 0.194 embryonal Fyn-associated substrate isoform 1 CASS4 0.141 HEF-like protein FCHSD2 0.088 FCH and double SH3 domains 2 CD2AP 0.073 CD2-associated protein SH3KBP1 0.068 SH3-domain kinase binding protein 1 isoform b SH3KBP1 0.068 SH3-domain kinase binding protein 1 isoform a SNX18 0.068 sorting nexin 18 isoform c SNX18 0.068 sorting nexin 18 isoform a SNX18 0.068 sorting nexin 18 isoform b FCHSD1 0.064 FCH and double SH3 domains 1 C1orf113 0.062 SH3 domain-containing protein C1orf113 isoform 1 [H... C1orf113 0.062 SH3 domain-containing protein C1orf113 isoform 2 [H... SUPT5H 0.059 suppressor of Ty 5 homolog isoform b SUPT5H 0.059 suppressor of Ty 5 homolog isoform a SUPT5H 0.059 suppressor of Ty 5 homolog isoform a SUPT5H 0.059 suppressor of Ty 5 homolog isoform a PSTPIP1 0.059 proline-serine-threonine phosphatase interacting pro... KIAA1804 0.059 mixed lineage kinase 4 PPP1R13L 0.057 protein phosphatase 1, regulatory subunit 13 like [... PPP1R13L 0.057 protein phosphatase 1, regulatory subunit 13 like [H... SFPQ 0.055 splicing factor proline/glutamine rich (polypyrimidin... MYO1F 0.053 myosin IF Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.