Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NCK1 Sequence: fasta or formatted (377aa) NCBI GI: 5453754
Description:

NCK adaptor protein 1

Referenced in:

Receptor Tyrosine Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         17           2
 C cysteine            1.1          4           1
 D aspartate           5.8         22           2
 E glutamate           8.2         31           2
 F phenylalanine       3.4         13           1
 G glycine             6.6         25           1
 H histidine           1.9          7           1
 I isoleucine          2.9         11           1
 K lysine              9.0         34           2
 L leucine             7.7         29           2
 M methionine          2.7         10           1
 N asparagine          6.4         24           2
 P proline             5.3         20           2
 Q glutamine           3.4         13           2
 R arginine            4.0         15           1
 S serine              8.2         31           3
 T threonine           3.2         12           1
 V valine              9.3         35           4
 W tryptophan          2.4          9           2
 Y tyrosine            4.0         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NCK adaptor protein 1 
NCK2                  0.686   NCK adaptor protein 2 isoform A 
NCK2                  0.686   NCK adaptor protein 2 isoform A 
NCK2                  0.144   NCK adaptor protein 2 isoform B 
ITSN1                 0.108   intersectin 1 isoform ITSN-l 
ITSN1                 0.105   intersectin 1 isoform ITSN-s 
GRB2                  0.100   growth factor receptor-bound protein 2 isoform 1 [Hom...
GRAP                  0.100   GRB2-related adaptor protein 
ITSN2                 0.097   intersectin 2 isoform 3 
ITSN2                 0.097   intersectin 2 isoform 1 
ITSN2                 0.097   intersectin 2 isoform 2 
SH3D19                0.077   SH3 domain containing 19 isoform c 
SH3D19                0.077   SH3 domain containing 19 isoform b 
SH3D19                0.077   SH3 domain containing 19 isoform a 
ABL2                  0.076   arg tyrosine kinase isoform c 
ABL2                  0.076   arg tyrosine kinase isoform b 
ABL2                  0.076   arg tyrosine kinase isoform e 
ABL2                  0.076   arg tyrosine kinase isoform d 
ABL2                  0.076   arg tyrosine kinase isoform a 
LOC400581             0.074   hypothetical protein LOC400581 
ABL1                  0.073   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.073   c-abl oncogene 1, receptor tyrosine kinase isoform b...
CSK                   0.073   c-src tyrosine kinase 
CSK                   0.073   c-src tyrosine kinase 
YES1                  0.073   viral oncogene yes-1 homolog 1 
SRC                   0.070   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.070   proto-oncogene tyrosine-protein kinase SRC 
C1orf113              0.069   SH3 domain-containing protein C1orf113 isoform 1 [H...
FYN                   0.069   protein-tyrosine kinase fyn isoform b 
FYN                   0.069   protein-tyrosine kinase fyn isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press