Search of human proteins with 18129630

Search of human proteins with 18129630

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|18129630 chromosome 20 open reading frame 165 [Homo sapiens]
         (227 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|18129630 chromosome 20 open reading frame 165 [Homo sapiens]       475   e-134
gi|4758392 forkhead box D1 [Homo sapiens]                              39   0.005
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ...    35   0.040
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ...    35   0.040
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ...    35   0.040
gi|163965366 nascent polypeptide-associated complex alpha subuni...    35   0.053
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]               34   0.12 
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              33   0.15 
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ...    32   0.34 
gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ...    32   0.34 
gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]            32   0.34 
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]        32   0.45 
gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo ...    31   0.76 
gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo ...    31   0.76 
gi|15193488 BCL2 binding component 3 isoform 4 [Homo sapiens]          31   0.76 
gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens]          31   0.76 
gi|40807452 peroxisome proliferator-activated receptor gamma, co...    31   0.76 
gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo...    31   0.76 
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]            31   0.99 
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]            31   0.99 
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]            31   0.99 
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             31   0.99 
gi|50843837 hypothetical protein LOC55701 [Homo sapiens]               31   0.99 
gi|6912458 calcineurin binding protein 1 [Homo sapiens]                30   1.3  
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]            30   1.7  
gi|187829742 BCL2 binding component 3 isoform 2 [Homo sapiens]         30   1.7  
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re...    30   1.7  
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re...    30   1.7  
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r...    30   1.7  
gi|171184451 centrosome-associated protein 350 [Homo sapiens]          30   1.7  

>gi|18129630 chromosome 20 open reading frame 165 [Homo sapiens]
          Length = 227

 Score =  475 bits (1223), Expect = e-134
 Identities = 227/227 (100%), Positives = 227/227 (100%)

Query: 1   MSYFRTPQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQA 60
           MSYFRTPQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQA
Sbjct: 1   MSYFRTPQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQA 60

Query: 61  WGPALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDLGGPS 120
           WGPALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDLGGPS
Sbjct: 61  WGPALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDLGGPS 120

Query: 121 RPRPLMLCGLSPRVLPVPSEAVGKEASSQPDICILTLAMMIAGIPTVPVPGVREEDLIWA 180
           RPRPLMLCGLSPRVLPVPSEAVGKEASSQPDICILTLAMMIAGIPTVPVPGVREEDLIWA
Sbjct: 121 RPRPLMLCGLSPRVLPVPSEAVGKEASSQPDICILTLAMMIAGIPTVPVPGVREEDLIWA 180

Query: 181 AQAFMMAHPEPEGAVEGARWEQAHAHTASGKMPLVRSKRGQPPGSCL 227
           AQAFMMAHPEPEGAVEGARWEQAHAHTASGKMPLVRSKRGQPPGSCL
Sbjct: 181 AQAFMMAHPEPEGAVEGARWEQAHAHTASGKMPLVRSKRGQPPGSCL 227


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 11  PGPLPSGQGGAASPGLSLGLCSP--VEPVVVASGGTGPLSQKAEQVAPAAQAWGPA---L 65
           PGPLP+    A  PG S    SP  +E ++  S G    +  A Q A AAQA  P+   +
Sbjct: 339 PGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQA-SPSPSPV 397

Query: 66  AMPQARGCPGG 76
           A P A G  GG
Sbjct: 398 AAPPAPGSSGG 408


>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 46  PLSQKAEQVAPAAQAWGPALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWD 105
           P  + A Q+A        ++  P  R   G      +  E+SRN  +FP      S   +
Sbjct: 648 PTQKNALQIATPTIPMADSVHFPSTRQMLGLAEGLVMPSEHSRNAMRFP-----SSAASE 702

Query: 106 NGYS--RSRAPDLGGPSRPRPLMLCGL-SPRVLPVPSEAVGKEASSQP 150
            G    R  +   G  + P+P ++CG+ SP+    P E  G +    P
Sbjct: 703 QGLELCRPGSGKKGAMASPQPFLVCGVSSPKTPQRPPEGFGHKVPKHP 750


>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 46  PLSQKAEQVAPAAQAWGPALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWD 105
           P  + A Q+A        ++  P  R   G      +  E+SRN  +FP      S   +
Sbjct: 648 PTQKNALQIATPTIPMADSVHFPSTRQMLGLAEGLVMPSEHSRNAMRFP-----SSAASE 702

Query: 106 NGYS--RSRAPDLGGPSRPRPLMLCGL-SPRVLPVPSEAVGKEASSQP 150
            G    R  +   G  + P+P ++CG+ SP+    P E  G +    P
Sbjct: 703 QGLELCRPGSGKKGAMASPQPFLVCGVSSPKTPARPPEGFGHKVPKHP 750


>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 46  PLSQKAEQVAPAAQAWGPALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWD 105
           P  + A Q+A        ++  P  R   G      +  E+SRN  +FP      S   +
Sbjct: 648 PTQKNALQIATPTIPMADSVHFPSTRQMLGLAEGLVMPSEHSRNAMRFP-----SSAASE 702

Query: 106 NGYS--RSRAPDLGGPSRPRPLMLCGL-SPRVLPVPSEAVGKEASSQP 150
            G    R  +   G  + P+P ++CG+ SP+    P E  G +    P
Sbjct: 703 QGLELCRPGSGKKGAMASPQPFLVCGVSSPKTPARPPEGFGHKVPKHP 750


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP--A 64
            P T    LPS +GG A+P L      P        GG    S K   + PAA    P   
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGG 1116

Query: 65   LAMPQARGCP 74
            LA P  +G P
Sbjct: 1117 LATPPHKGAP 1126



 Score = 31.2 bits (69), Expect = 0.76
 Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP--A 64
            P T     PS +GG A+P       +P        GG    S K     PAA    P   
Sbjct: 1172 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1231

Query: 65   LAMPQARGCP 74
            LA P  +G P
Sbjct: 1232 LATPSPKGAP 1241



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP--A 64
            P T     PS +GG A+P       +P        GG    S K     PAA    P   
Sbjct: 1149 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1208

Query: 65   LAMPQARGCP 74
            LA P  +G P
Sbjct: 1209 LATPSPKGAP 1218



 Score = 28.5 bits (62), Expect = 4.9
 Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP--A 64
            P T     PS +GG A+P       +P        GG      K     PAA    P   
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1185

Query: 65   LAMPQARGCP 74
            LA P  +G P
Sbjct: 1186 LATPSPKGAP 1195



 Score = 28.5 bits (62), Expect = 4.9
 Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 4/90 (4%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAA----QAWG 62
            P T     PS +GG A+P       +P        GG    S K     PAA       G
Sbjct: 1195 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1254

Query: 63   PALAMPQARGCPGGTSWETLRKEYSRNCHK 92
            PA   P+    P   +  +L+   +   HK
Sbjct: 1255 PATPPPKGAPTPPAATPPSLKGGLATPPHK 1284


>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
          Length = 1714

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 4    FRTPQTHPGP--LPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAW 61
            +R  Q  PGP  LP  +G    PG    +  P  P     G  GP+  + E+  P A+ +
Sbjct: 1171 YRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGP----RGEPGPVGDQGERGEPGAEGY 1226

Query: 62   GPALAMPQARGCPG 75
               + +P  RG  G
Sbjct: 1227 KGHVGVPGLRGATG 1240


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 11/154 (7%)

Query: 6   TPQTHPGP-LPSGQGGAASPGLSLGLCSPVEPVVVASGG-------TGPLSQKAEQVAPA 57
           TP     P L SG G  +S        SPVEP + +  G         P +    +V P 
Sbjct: 560 TPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPK 619

Query: 58  AQAWGPALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDLG 117
               GP    P ++G       ++L   + R   +   ++Q +   W      S  P   
Sbjct: 620 GDGIGPT-RQPPSQGLGYPKYQKSLPPRFQRQ-QQEQLLKQQQQHQWQQHQQGSAPPTPV 677

Query: 118 GPSRPRPLMLCGL-SPRVLPVPSEAVGKEASSQP 150
            PS P+P+ L  + +P+  P P +A+   A  +P
Sbjct: 678 PPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRP 711


>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
           sapiens]
          Length = 528

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 17/137 (12%)

Query: 17  GQGGAASPGLSLGL--CSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPALAMPQARGCP 74
           G  G  +  LS GL  CS  EP       TGP   ++ +  P A+   P  ++    G  
Sbjct: 220 GTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTA 279

Query: 75  GGTSWETLRKEYSRNCHKFPHVRQLESLG--WDNGYSRSRAP-DLGGPSRPRP-LMLCGL 130
           G            R+    P  R   + G     G S S  P  + GP  PRP L++   
Sbjct: 280 G-----------PRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPR 328

Query: 131 SPRVLPVPSEAVGKEAS 147
           + R   VP+  VG+ +S
Sbjct: 329 TSRCRLVPAAVVGRSSS 345


>gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo
           sapiens]
          Length = 528

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 17/137 (12%)

Query: 17  GQGGAASPGLSLGL--CSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPALAMPQARGCP 74
           G  G  +  LS GL  CS  EP       TGP   ++ +  P A+   P  ++    G  
Sbjct: 220 GTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTA 279

Query: 75  GGTSWETLRKEYSRNCHKFPHVRQLESLG--WDNGYSRSRAP-DLGGPSRPRP-LMLCGL 130
           G            R+    P  R   + G     G S S  P  + GP  PRP L++   
Sbjct: 280 G-----------PRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPR 328

Query: 131 SPRVLPVPSEAVGKEAS 147
           + R   VP+  VG+ +S
Sbjct: 329 TSRCRLVPAAVVGRSSS 345


>gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 528

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 17/137 (12%)

Query: 17  GQGGAASPGLSLGL--CSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPALAMPQARGCP 74
           G  G  +  LS GL  CS  EP       TGP   ++ +  P A+   P  ++    G  
Sbjct: 220 GTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTA 279

Query: 75  GGTSWETLRKEYSRNCHKFPHVRQLESLG--WDNGYSRSRAP-DLGGPSRPRP-LMLCGL 130
           G            R+    P  R   + G     G S S  P  + GP  PRP L++   
Sbjct: 280 G-----------PRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPR 328

Query: 131 SPRVLPVPSEAVGKEAS 147
           + R   VP+  VG+ +S
Sbjct: 329 TSRCRLVPAAVVGRSSS 345


>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
          Length = 4857

 Score = 32.0 bits (71), Expect = 0.45
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 10/65 (15%)

Query: 19 GGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPALAMPQARGCPGGTS 78
          GGAA PG    +  P+  V+V S G        +  A AA A GP  +     G  G + 
Sbjct: 5  GGAAPPGT---VTEPLPSVIVLSAGR-------KMAAAAAAASGPGCSSAAGAGAAGVSE 54

Query: 79 WETLR 83
          W  LR
Sbjct: 55 WLVLR 59


>gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo
          sapiens]
          Length = 220

 Score = 31.2 bits (69), Expect = 0.76
 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 12/62 (19%)

Query: 25 GLSLGLCSPVEPVVVASGGTGPLS--QKAEQVAPAAQAWGPALA----MPQAR-GCPGGT 77
          G  LG CS VE      G   PL+  Q+A  +AP+   W PA       P AR G  G  
Sbjct: 17 GCPLGWCSAVE-----RGQVAPLNAPQRARGIAPSLARWRPAFGERDQQPPARPGVSGAA 71

Query: 78 SW 79
           W
Sbjct: 72 GW 73


>gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo
          sapiens]
          Length = 220

 Score = 31.2 bits (69), Expect = 0.76
 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 12/62 (19%)

Query: 25 GLSLGLCSPVEPVVVASGGTGPLS--QKAEQVAPAAQAWGPALA----MPQAR-GCPGGT 77
          G  LG CS VE      G   PL+  Q+A  +AP+   W PA       P AR G  G  
Sbjct: 17 GCPLGWCSAVE-----RGQVAPLNAPQRARGIAPSLARWRPAFGERDQQPPARPGVSGAA 71

Query: 78 SW 79
           W
Sbjct: 72 GW 73


>gi|15193488 BCL2 binding component 3 isoform 4 [Homo sapiens]
          Length = 193

 Score = 31.2 bits (69), Expect = 0.76
 Identities = 57/223 (25%), Positives = 71/223 (31%), Gaps = 72/223 (32%)

Query: 12  GPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPALAMPQAR 71
           GP P   G      +S GLC P      A          A  + PAA    P  A P   
Sbjct: 21  GPRPFPLGRLVPSAVSCGLCEPGLAAAPA----------APTLLPAAYLCAPT-APPAVT 69

Query: 72  GCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDLGGP-SRPRPLMLCGL 130
              GG+ W                                     GGP SRPR     G 
Sbjct: 70  AALGGSRWP------------------------------------GGPRSRPRGPRPDG- 92

Query: 131 SPRVLPVPSEAVGKEASSQPDICILTLAMMIAGIPTVPVPGVREEDLIWA----AQAFMM 186
                P PS ++ ++    P   + +    +AG PT   PGVR E+  WA    AQ   M
Sbjct: 93  -----PQPSLSLAEQHLESP---VPSAPGALAGGPTQAAPGVRGEEEQWAREIGAQLRRM 144

Query: 187 AHPEPEGAVEGARWEQAHAHTAS----------GKMPLVRSKR 219
           A  +     E  R E+   H  S          G +PL R  R
Sbjct: 145 A-DDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPLPRGHR 186


>gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens]
          Length = 390

 Score = 31.2 bits (69), Expect = 0.76
 Identities = 41/144 (28%), Positives = 54/144 (37%), Gaps = 13/144 (9%)

Query: 7   PQTHPGPLPSGQGGAASPGLSLGLCSP-VEPVVVASGGTGPLSQKAEQVAPAAQAWGPAL 65
           P T P P P+G           GL  P + P + A+ G  P S  A  V   +Q  G + 
Sbjct: 241 PFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGP-PASSAA--VWKKSQGAGSSP 297

Query: 66  AMPQA-------RGCPGGTSWETLRKEYS-RNCHKFPHVRQLESLGWDNGYSRSRAPDLG 117
             PQ           P    WE  R  YS   C      R   +L  ++    + A    
Sbjct: 298 RRPQGGSDAPSGHAAPSRIVWEHTRGRYSCMQCAFSTASRPAMTLHLEDHRPGAPAAPAA 357

Query: 118 GPSRP-RPLMLCGLSPRVLPVPSE 140
           GP RP  P     L+P+V P+ SE
Sbjct: 358 GPPRPDAPADPAPLAPKVSPLLSE 381


>gi|40807452 peroxisome proliferator-activated receptor gamma,
            coactivator-related 1 [Homo sapiens]
          Length = 1664

 Score = 31.2 bits (69), Expect = 0.76
 Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 6/104 (5%)

Query: 24   PGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP-ALAMPQARGCPGG----TS 78
            P LSLG  +P  P + AS         +EQ  P+A    P +L  P+A  C       T 
Sbjct: 1333 PVLSLGPAAPPPPCIAASREPLDHRTSSEQADPSAPCLAPSSLLSPEASPCRNDMNTRTP 1392

Query: 79   WETLRKEYSRNCH-KFPHVRQLESLGWDNGYSRSRAPDLGGPSR 121
             E   K+ S  C+ K        S GW     R+      G +R
Sbjct: 1393 PEPSAKQRSMRCYRKACRSASPSSQGWQGRRGRNSRSVSSGSNR 1436


>gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo
           sapiens]
          Length = 367

 Score = 31.2 bits (69), Expect = 0.76
 Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 13  PLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPALAMPQARG 72
           P+P+    AA+     G  +  +P     G   P    A QVAP      P   + QA  
Sbjct: 124 PVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQAST 183

Query: 73  CPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRS 111
              G     L     R C++   +   E +GW  G  RS
Sbjct: 184 ---GELLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRS 219


>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 42/136 (30%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 5   RTPQTHPGPLPSGQGGAASP-GLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP 63
           RTP     P P   GG  +P   + G  SP    +  SG   P      Q+ P  Q  G 
Sbjct: 133 RTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRLRVSGRGSPA-----QLPPTYQLLGY 187

Query: 64  ALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDL----GGP 119
             A P+A   PGG + ETL  E +R   +     Q   L      SR+R   L     G 
Sbjct: 188 HRAPPRAS--PGGWNTETLNTEDAR--RRARSATQAPPLALVPARSRARPAHLRVRAAGR 243

Query: 120 SRPRPLMLCGLSPRVL 135
           SR R L+      R L
Sbjct: 244 SRHRVLLALSRESRHL 259


>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 42/136 (30%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 5   RTPQTHPGPLPSGQGGAASP-GLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP 63
           RTP     P P   GG  +P   + G  SP    +  SG   P      Q+ P  Q  G 
Sbjct: 133 RTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRLRVSGRGSPA-----QLPPTYQLLGY 187

Query: 64  ALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDL----GGP 119
             A P+A   PGG + ETL  E +R   +     Q   L      SR+R   L     G 
Sbjct: 188 HRAPPRAS--PGGWNTETLNTEDAR--RRARSATQAPPLALVPARSRARPAHLRVRAAGR 243

Query: 120 SRPRPLMLCGLSPRVL 135
           SR R L+      R L
Sbjct: 244 SRHRVLLALSRESRHL 259


>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 42/136 (30%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 5   RTPQTHPGPLPSGQGGAASP-GLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP 63
           RTP     P P   GG  +P   + G  SP    +  SG   P      Q+ P  Q  G 
Sbjct: 133 RTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRLRVSGRGSPA-----QLPPTYQLLGY 187

Query: 64  ALAMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDL----GGP 119
             A P+A   PGG + ETL  E +R   +     Q   L      SR+R   L     G 
Sbjct: 188 HRAPPRAS--PGGWNTETLNTEDAR--RRARSATQAPPLALVPARSRARPAHLRVRAAGR 243

Query: 120 SRPRPLMLCGLSPRVL 135
           SR R L+      R L
Sbjct: 244 SRHRVLLALSRESRHL 259


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 16/90 (17%)

Query: 13  PLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAP--------AAQAWGPA 64
           P  + +G AASP L+     PVEP        GP S  AE  AP         A   G  
Sbjct: 502 PAAASEGPAASPPLAAAESPPVEP--------GPGSLDAEAAAPERPKAERAEAPPAGAE 553

Query: 65  LAMPQARGCPGGTSWETLRKEYSRNCHKFP 94
            A P+ +   GG      +K    +C   P
Sbjct: 554 RAAPERKAERGGAELRGAKKFSVSSCRARP 583


>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
          Length = 1519

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 42/158 (26%), Positives = 53/158 (33%), Gaps = 20/158 (12%)

Query: 7   PQTHPGPLPSGQGGAASPGL---SLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGP 63
           P T P  LPSG  G  SP L   +LG  SP        G   P+     +     +   P
Sbjct: 198 PSTLPPELPSGPPGLPSPPLPEEALGTRSP------GDGHNAPVEGPEGEYVELLEVTLP 251

Query: 64  ALAMP-QARGCPGGTSWETL-------RKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPD 115
               P  A G PG +   T+        K   R    + H + L   G D          
Sbjct: 252 VRGSPTDAEGSPGLSRVRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRGQDGARPPGEGSS 311

Query: 116 LGGPSRPRPLMLCGLSPRVLPV---PSEAVGKEASSQP 150
            G      P         VL V   P+EAVG+ + S P
Sbjct: 312 TGASPESPPGAEAVPEAAVLEVSEPPAEAVGEASGSCP 349


>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
          Length = 2220

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 13/146 (8%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLS-QKAEQVAPAAQAWGPAL 65
            PQ    PL  G G    PG  +GL +   PV + +G +   S ++ ++ +P A   GP  
Sbjct: 1704 PQPKKPPLADGSGPGPEPGGKVGLLNH-RPVAMDAGDSADQSGERKDKESPRA---GPTE 1759

Query: 66   AMPQARGCPGGTSWETLRKEYSRNCHKFPHVRQLESLGWDNGYSRSRAPDLGGPSRPRPL 125
             M  +              +  R     P  R     G ++  +     +L   +R +P 
Sbjct: 1760 PMDTSEA-------TVCHSDLERTPPLLPG-RPARDRGPESRPTELSLEELSISARQQPT 1811

Query: 126  MLCGLSPRVLPVPSEAVGKEASSQPD 151
             L    P   P P+   G  A   P+
Sbjct: 1812 PLTPAQPAPAPAPATTTGTRAGGHPE 1837


>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 3859

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   TPQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPAL 65
           TP   PG   +   G   P  S    SP  PV    G   P++     VAP + A GP +
Sbjct: 711 TPADTPGSPVTSADGPVVPVTSAD--SPFVPVTPPDGPVVPVTSADGPVAPVSSADGPVV 768

Query: 66  AMPQARG 72
            +  A G
Sbjct: 769 PVTSADG 775



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6    TPQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPAL 65
            TP   PG   +   G   P  S    SP  PV    G   P++     VAP + A GP +
Sbjct: 1052 TPADTPGSPVTSADGPVVPVTSAD--SPFVPVTPPDGPVVPVTSADGPVAPVSSADGPVV 1109

Query: 66   AMPQARG 72
             +  A G
Sbjct: 1110 PVTSADG 1116



 Score = 28.5 bits (62), Expect = 4.9
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 33  PVEPVVVASGGTGPLSQKAEQVAPAAQAWGPALAMPQARG 72
           PV PV  A G   P+S     V P   A GP   +  A G
Sbjct: 746 PVVPVTSADGPVAPVSSADGPVVPVTSADGPVAPVSSADG 785



 Score = 28.5 bits (62), Expect = 4.9
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 33   PVEPVVVASGGTGPLSQKAEQVAPAAQAWGPALAMPQARG 72
            PV PV  A G   P+S     V P   A GP   +  A G
Sbjct: 1087 PVVPVTSADGPVAPVSSADGPVVPVTSADGPVAPVSSADG 1126



 Score = 28.1 bits (61), Expect = 6.4
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 6   TPQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTGPLSQKAEQVAPAAQAWGPAL 65
           TP   PG   +   G   P  S  +  P+ PV    G   P++     VAP + A GP +
Sbjct: 451 TPADTPGSPVTSADGPVVPVTSADI--PLVPVTPPDGPVVPVTSADGPVAPVSSADGPVV 508

Query: 66  AMPQA 70
            +  A
Sbjct: 509 PVTPA 513


>gi|187829742 BCL2 binding component 3 isoform 2 [Homo sapiens]
          Length = 131

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 24/110 (21%)

Query: 124 PLMLCGLSPRVLPVPSEAVGKEASSQPDICILTLAMMIAGIPTVPVPGVREEDLIWA--- 180
           P  +CG      P PS ++ ++    P   + +    +AG PT   PGVR E+  WA   
Sbjct: 25  PCQICG------PQPSLSLAEQHLESP---VPSAPGALAGGPTQAAPGVRGEEEQWAREI 75

Query: 181 -AQAFMMAHPEPEGAVEGARWEQAHAHTAS----------GKMPLVRSKR 219
            AQ   MA  +     E  R E+   H  S          G +PL R  R
Sbjct: 76  GAQLRRMA-DDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPLPRGHR 124


>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin c2 isoform b [Homo sapiens]
          Length = 1130

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTG--PLS-QKAEQVAPAAQAWGP 63
            P   PG  P    GAA P    GL      VV A  G+G  P S   +EQ+  A    GP
Sbjct: 994  PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1053

Query: 64   ALAMPQARGCPG 75
                P     PG
Sbjct: 1054 QQQQPAGAPQPG 1065


>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin c2 isoform a [Homo sapiens]
          Length = 1214

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTG--PLS-QKAEQVAPAAQAWGP 63
            P   PG  P    GAA P    GL      VV A  G+G  P S   +EQ+  A    GP
Sbjct: 963  PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1022

Query: 64   ALAMPQARGCPG 75
                P     PG
Sbjct: 1023 QQQQPAGAPQPG 1034


>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin c2 isoform c [Homo sapiens]
          Length = 1152

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 7    PQTHPGPLPSGQGGAASPGLSLGLCSPVEPVVVASGGTG--PLS-QKAEQVAPAAQAWGP 63
            P   PG  P    GAA P    GL      VV A  G+G  P S   +EQ+  A    GP
Sbjct: 994  PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1053

Query: 64   ALAMPQARGCPG 75
                P     PG
Sbjct: 1054 QQQQPAGAPQPG 1065


>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
          Length = 3117

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 131  SPRVLPVPSEAVGKEASSQPDICILTLAMM 160
            SP V  VPSE++G+E    PD  ILT  M+
Sbjct: 1950 SPAVEYVPSESIGQEQPGSPDHSILTEEMI 1979


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,253,922
Number of Sequences: 37866
Number of extensions: 690266
Number of successful extensions: 2777
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 2618
Number of HSP's gapped (non-prelim): 256
length of query: 227
length of database: 18,247,518
effective HSP length: 99
effective length of query: 128
effective length of database: 14,498,784
effective search space: 1855844352
effective search space used: 1855844352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.