Guide to the Human Genome
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Name: BBC3 Sequence: fasta or formatted (131aa) NCBI GI: 187829742
Description:

BCL2 binding component 3 isoform 2

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [193aa] BCL2 binding component 3 isoform 4
alt prot [261aa] BCL2 binding component 3 isoform 1
alt prot [101aa] BCL2 binding component 3 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         15           2
 C cysteine            3.1          4           1
 D aspartate           1.5          2           2
 E glutamate           8.4         11           3
 F phenylalanine       0.8          1           1
 G glycine             8.4         11           2
 H histidine           2.3          3           1
 I isoleucine          2.3          3           1
 K lysine              0.8          1           1
 L leucine             8.4         11           2
 M methionine          3.8          5           1
 N asparagine          2.3          3           1
 P proline            12.2         16           1
 Q glutamine           9.2         12           2
 R arginine            9.9         13           3
 S serine              5.3          7           1
 T threonine           2.3          3           2
 V valine              3.8          5           1
 W tryptophan          2.3          3           1
 Y tyrosine            1.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2 binding component 3 isoform 2 
BBC3                  0.743   BCL2 binding component 3 isoform 4 
BBC3                  0.217   BCL2 binding component 3 isoform 1 
BBC3                  0.209   BCL2 binding component 3 isoform 3 
MAML2                 0.051   mastermind-like 2 
ESPN                  0.043   espin 
BMP6                  0.028   bone morphogenetic protein 6 preproprotein 
TCHH                  0.028   trichohyalin 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.028   PREDICTED: hypothetical protein LOC80164 
NAV2                  0.028   neuron navigator 2 isoform 3 
NAV2                  0.028   neuron navigator 2 isoform 1 
NAV2                  0.028   neuron navigator 2 isoform 2 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
CHD3                  0.028   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.028   chromodomain helicase DNA binding protein 3 isoform...
C20orf165             0.020   chromosome 20 open reading frame 165 
SALL3                 0.020   sal-like 3 
MAGED4B               0.020   melanoma antigen family D, 4B isoform 2 
MAGED4B               0.020   melanoma antigen family D, 4B isoform 1 
MAGED4B               0.020   melanoma antigen family D, 4B isoform 1 
MAP7                  0.020   microtubule-associated protein 7 
FOXE3                 0.020   forkhead box E3 
MAGED4                0.020   melanoma antigen family D, 4 
CCBE1                 0.020   collagen and calcium binding EGF domains 1 
C11orf9               0.020   hypothetical protein LOC745 isoform 1 
C11orf9               0.020   hypothetical protein LOC745 isoform 2 
KBTBD11               0.020   kelch repeat and BTB (POZ) domain containing 11 [Homo...
DMD                   0.016   dystrophin Dp427c isoform 
CCDC102A              0.016   coiled-coil domain containing 102A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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