Search of human proteins with 18104948

Search of human proteins with 18104948

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|18104948 ribosomal protein L21 [Homo sapiens]
         (160 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|18104948 ribosomal protein L21 [Homo sapiens]                      331   1e-91
gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo...    32   0.18 
gi|19718746 oxysterol-binding protein-like 1A isoform A [Homo sa...    32   0.30 
gi|19718741 oxysterol-binding protein-like 1A isoform B [Homo sa...    32   0.30 
gi|153945728 microtubule-associated protein 1B [Homo sapiens]          32   0.30 
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho...    31   0.52 
gi|125656165 THO complex 2 [Homo sapiens]                              30   1.2  
gi|31543535 R3H domain containing 1 [Homo sapiens]                     30   1.2  
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi...    29   1.5  
gi|122937271 WAS protein homolog associated with actin, golgi me...    29   1.5  
gi|118572603 ubinuclein 1 [Homo sapiens]                               29   2.0  
gi|118572601 ubinuclein 1 [Homo sapiens]                               29   2.0  
gi|77812674 nucleolar protein family A, member 2 isoform b [Homo...    29   2.0  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     29   2.0  
gi|33469933 phospholipase C beta 4 isoform a [Homo sapiens]            28   3.4  
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ...    28   3.4  
gi|33469939 phospholipase C beta 4 isoform b [Homo sapiens]            28   3.4  
gi|16554562 caspase recruitment domain protein 9 isoform 2 [Homo...    28   3.4  
gi|47717131 caspase recruitment domain protein 9 isoform 1 [Homo...    28   3.4  
gi|8393378 frizzled 3 [Homo sapiens]                                   28   4.4  
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]             28   4.4  
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]             28   4.4  
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]             28   4.4  
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]             28   4.4  
gi|225637489 hypothetical protein LOC54777 [Homo sapiens]              27   5.7  
gi|67782321 spectrin beta isoform a [Homo sapiens]                     27   5.7  
gi|148747864 JAW1-related protein isoform a [Homo sapiens]             27   5.7  
gi|154091334 JAW1-related protein isoform c [Homo sapiens]             27   5.7  
gi|154091332 JAW1-related protein isoform b [Homo sapiens]             27   5.7  
gi|148728182 JAW1-related protein isoform b [Homo sapiens]             27   5.7  

>gi|18104948 ribosomal protein L21 [Homo sapiens]
          Length = 160

 Score =  331 bits (849), Expect = 1e-91
 Identities = 160/160 (100%), Positives = 160/160 (100%)

Query: 1   MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
           MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK
Sbjct: 1   MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60

Query: 61  TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
           TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK
Sbjct: 61  TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120

Query: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
           EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160


>gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo
           sapiens]
          Length = 1544

 Score = 32.3 bits (72), Expect = 0.18
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 87  KRINVRIE---HIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPR 136
           K + V+++   +++H + R  FL ++K++ +K KE +EKG          PPR
Sbjct: 553 KHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDKEGEEKGKRRGFPSILGPPR 605


>gi|19718746 oxysterol-binding protein-like 1A isoform A [Homo
           sapiens]
          Length = 437

 Score = 31.6 bits (70), Expect = 0.30
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 103 DSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFV 141
           D++ K  K+N ++KK +K+  T  +L   P P  E+ F+
Sbjct: 275 DAYKKNDKKNTEEKKNSKQMSTSEELDEMPVPDSESVFI 313


>gi|19718741 oxysterol-binding protein-like 1A isoform B [Homo
           sapiens]
          Length = 950

 Score = 31.6 bits (70), Expect = 0.30
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 103 DSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFV 141
           D++ K  K+N ++KK +K+  T  +L   P P  E+ F+
Sbjct: 788 DAYKKNDKKNTEEKKNSKQMSTSEELDEMPVPDSESVFI 826


>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
          Length = 2468

 Score = 31.6 bits (70), Expect = 0.30
 Identities = 18/78 (23%), Positives = 38/78 (48%)

Query: 76  VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPP 135
           V K+VK +I  +      + +K         K VK+ ++K+ + +EK    ++K+ P   
Sbjct: 680 VKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDA 739

Query: 136 REAHFVRTNGKEPELLEP 153
           +++    +  K+P  L+P
Sbjct: 740 KKSSTPLSEAKKPAALKP 757


>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
           sapiens]
          Length = 929

 Score = 30.8 bits (68), Expect = 0.52
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 100 KSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIP 155
           K +D  +++ KE  + KK+ +EKG      ++    RE   V+  G+E ++  P P
Sbjct: 603 KLKDGLVRKEKEKHKDKKKDREKG------KKDKDKREKEKVKDKGREDKMKAPAP 652



 Score = 29.3 bits (64), Expect = 1.5
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 78  KQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKE-AKEKGTWVQLKRQPAPP 135
           + V  K+  K   VR E  KH   +    K  K+ D+++KE  K+KG   ++K  PAPP
Sbjct: 596 EDVDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMK-APAPP 653



 Score = 26.6 bits (57), Expect = 9.8
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 84  ILAKRINVRIEHIKHS-KSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVR 142
           +L +++    E +K   K +D   K+ K+  +K+K+ KE+    + + +    +E H   
Sbjct: 684 VLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHKHE 743

Query: 143 TNGKEPELLEPIP 155
               EP  L P P
Sbjct: 744 KIKVEPVALAPSP 756


>gi|125656165 THO complex 2 [Homo sapiens]
          Length = 1593

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 107  KRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKE 147
            K VKEND++K + KEK    + ++ PA   EA  +  +GKE
Sbjct: 1264 KAVKENDKEKGKEKEK---EKKEKTPATTPEARVLGKDGKE 1301


>gi|31543535 R3H domain containing 1 [Homo sapiens]
          Length = 1099

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 62  GRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKE 121
           G  +NV Q    ++VNK    +I  ++ N   EHIK  K  D   + + + D    +  +
Sbjct: 211 GLDHNVDQSGKSVIVNKTSNTRIPDQKFN---EHIKDDKGEDFQKRYILKRDNSSFDKDD 267

Query: 122 KGTWVQLK 129
               ++LK
Sbjct: 268 NQMRIRLK 275


>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 123

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 18/70 (25%), Positives = 34/70 (48%)

Query: 78  KQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPRE 137
           ++ +GK   KR   R E  K  K++++  ++ KE ++KK++ K K    + +R+     E
Sbjct: 23  EEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEE 82

Query: 138 AHFVRTNGKE 147
                   KE
Sbjct: 83  EEEKEEEEKE 92


>gi|122937271 WAS protein homolog associated with actin, golgi
           membranes and microtubules [Homo sapiens]
          Length = 809

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 23/91 (25%)

Query: 81  KGKILAKRINVRI-----------------EHIKHSKSRDSF-LKR--VKENDQKKKE-- 118
           +G+I AKR ++R                  E I++S+   S  +KR  +KE +QKKKE  
Sbjct: 472 RGRICAKRASLRSRKDQCKENHRFRLQQAEESIRYSRQHHSIQMKRDKIKEEEQKKKEWI 531

Query: 119 AKEKGTWVQLKRQPAPPREAHFVR-TNGKEP 148
            +E+   +Q  R     R A  VR T+G EP
Sbjct: 532 NQERQKTLQRLRSFKDKRLAQSVRNTSGSEP 562


>gi|118572603 ubinuclein 1 [Homo sapiens]
          Length = 1134

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 99  SKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQ 131
           S+S D F+K  K+   KK++ KE G  ++ K++
Sbjct: 173 SESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKK 205


>gi|118572601 ubinuclein 1 [Homo sapiens]
          Length = 1134

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 99  SKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQ 131
           S+S D F+K  K+   KK++ KE G  ++ K++
Sbjct: 173 SESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKK 205


>gi|77812674 nucleolar protein family A, member 2 isoform b [Homo
           sapiens]
          Length = 90

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 74  IVVNKQVKGKILAKRINVR--IEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQ 131
           ++VN+    + LA R   R   + IK +  +    + VKE  QK     EKGTWVQ +  
Sbjct: 27  LLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEV-QKFVNKGEKGTWVQPQAP 85

Query: 132 PAPP 135
            APP
Sbjct: 86  SAPP 89


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 87   KRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPA 133
            ++IN+  E +     R   LK   E+D+ K E KE     +LK Q A
Sbjct: 1479 EQINLLKEELDQQNKRFDCLKGEMEDDKSKMEKKESNLETELKSQTA 1525


>gi|33469933 phospholipase C beta 4 isoform a [Homo sapiens]
          Length = 1194

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 91  VRIEHIKHSKSRDSFLKRVKE--NDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEP 148
           VRIE +K  K+    LK+ ++  N  KKK AKE  T  +L         A + +      
Sbjct: 917 VRIEDLKQMKAYLKHLKKQQKELNSLKKKHAKEHSTMQKLHCTQVDKIVAQYDKEKSTHE 976

Query: 149 ELLE 152
           ++LE
Sbjct: 977 KILE 980


>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
           isoform 2 [Homo sapiens]
          Length = 1153

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 8/61 (13%)

Query: 97  KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAH----FVRTNGKEPELLE 152
           K SK      K+ KE ++ K++ KEK    + K+ P P ++ H      RT GK+    +
Sbjct: 839 KKSKKPKKKEKKHKEKERDKEKKKEK----EKKKSPKPKKKKHRKEKEERTKGKKKSKKQ 894

Query: 153 P 153
           P
Sbjct: 895 P 895


>gi|33469939 phospholipase C beta 4 isoform b [Homo sapiens]
          Length = 1175

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 91  VRIEHIKHSKSRDSFLKRVKE--NDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEP 148
           VRIE +K  K+    LK+ ++  N  KKK AKE  T  +L         A + +      
Sbjct: 917 VRIEDLKQMKAYLKHLKKQQKELNSLKKKHAKEHSTMQKLHCTQVDKIVAQYDKEKSTHE 976

Query: 149 ELLE 152
           ++LE
Sbjct: 977 KILE 980


>gi|16554562 caspase recruitment domain protein 9 isoform 2 [Homo
           sapiens]
          Length = 492

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 67  VTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWV 126
           +TQ  +  V+  Q K + L   ++ + + IK  + +DS L++ +E  Q+ KE  E G+  
Sbjct: 115 LTQLLMTEVMKLQKKVQDLTALLSSKDDFIKELRVKDSLLRKHQERVQRLKEECEAGS-R 173

Query: 127 QLKR 130
           +LKR
Sbjct: 174 ELKR 177


>gi|47717131 caspase recruitment domain protein 9 isoform 1 [Homo
           sapiens]
          Length = 536

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 67  VTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWV 126
           +TQ  +  V+  Q K + L   ++ + + IK  + +DS L++ +E  Q+ KE  E G+  
Sbjct: 115 LTQLLMTEVMKLQKKVQDLTALLSSKDDFIKELRVKDSLLRKHQERVQRLKEECEAGS-R 173

Query: 127 QLKR 130
           +LKR
Sbjct: 174 ELKR 177


>gi|8393378 frizzled 3 [Homo sapiens]
          Length = 666

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 50  KGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 109
           +GM  +  HG   R+ + ++H+    +N+Q +   +    N  + HI H  S    + RV
Sbjct: 603 RGMEERLPHGSMSRLTDHSRHSSSHRLNEQSRHSSIRDLSNNPMTHITHGTS----MNRV 658

Query: 110 KEND 113
            E D
Sbjct: 659 IEED 662


>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
          Length = 338

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 97  KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPE 149
           K  K +D   K+ K+  + KK+ KEK    Q++  P P  +  + R+ G+E +
Sbjct: 207 KRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLD-QWHRSAGEEED 258


>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
          Length = 352

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 97  KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPE 149
           K  K +D   K+ K+  + KK+ KEK    Q++  P P  +  + R+ G+E +
Sbjct: 218 KRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLD-QWHRSAGEEED 269


>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
          Length = 341

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 97  KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPE 149
           K  K +D   K+ K+  + KK+ KEK    Q++  P P  +  + R+ G+E +
Sbjct: 207 KRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLD-QWHRSAGEEED 258


>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
          Length = 360

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 97  KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPE 149
           K  K +D   K+ K+  + KK+ KEK    Q++  P P  +  + R+ G+E +
Sbjct: 226 KRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLD-QWHRSAGEEED 277


>gi|225637489 hypothetical protein LOC54777 [Homo sapiens]
          Length = 2441

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 97   KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLK-----RQPAPPRE 137
            + SK ++    + KEN++ K++ KEKG   ++K     + PAP ++
Sbjct: 1094 ERSKEKEKERSKEKENERSKEKDKEKGKEEKVKEPKQSQSPAPIKQ 1139


>gi|67782321 spectrin beta isoform a [Homo sapiens]
          Length = 2328

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 114  QKKKEAKEKGTWVQLKRQPAPP-REAHFVRTNGKEPELLEPI 154
            ++    +E+GTW Q  +QP PP +     ++ G E    EP+
Sbjct: 2111 ERTSPGEEEGTWPQNLQQPPPPGQHKDGQKSTGDERPTTEPL 2152


>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
          Length = 903

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 43  KGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSR 102
           KG   V   +P    +GKT    +    A  + ++   +   L++    R+E   +SK  
Sbjct: 723 KGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEE---LSQETKARMEEEAYSKGF 779

Query: 103 DSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEP 148
              LK+ KE    K+E +E     Q    P  P E        K P
Sbjct: 780 QEGLKKTKELQDLKEEEEE-----QKSESPEEPEEVEETEEEEKGP 820


>gi|154091334 JAW1-related protein isoform c [Homo sapiens]
          Length = 597

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 43  KGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSR 102
           KG   V   +P    +GKT    +    A  + ++   +   L++    R+E   +SK  
Sbjct: 417 KGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEE---LSQETKARMEEEAYSKGF 473

Query: 103 DSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEP 148
              LK+ KE    K+E +E     Q    P  P E        K P
Sbjct: 474 QEGLKKTKELQDLKEEEEE-----QKSESPEEPEEVEETEEEEKGP 514


>gi|154091332 JAW1-related protein isoform b [Homo sapiens]
          Length = 821

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 43  KGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSR 102
           KG   V   +P    +GKT    +    A  + ++   +   L++    R+E   +SK  
Sbjct: 641 KGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEE---LSQETKARMEEEAYSKGF 697

Query: 103 DSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEP 148
              LK+ KE    K+E +E     Q    P  P E        K P
Sbjct: 698 QEGLKKTKELQDLKEEEEE-----QKSESPEEPEEVEETEEEEKGP 738


>gi|148728182 JAW1-related protein isoform b [Homo sapiens]
          Length = 821

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 43  KGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSR 102
           KG   V   +P    +GKT    +    A  + ++   +   L++    R+E   +SK  
Sbjct: 641 KGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEE---LSQETKARMEEEAYSKGF 697

Query: 103 DSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEP 148
              LK+ KE    K+E +E     Q    P  P E        K P
Sbjct: 698 QEGLKKTKELQDLKEEEEE-----QKSESPEEPEEVEETEEEEKGP 738


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,379,748
Number of Sequences: 37866
Number of extensions: 274604
Number of successful extensions: 1293
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1231
Number of HSP's gapped (non-prelim): 88
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.