Guide to the Human Genome
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Name: OSBPL1A Sequence: fasta or formatted (437aa) NCBI GI: 19718746
Description:

oxysterol-binding protein-like 1A isoform A

Referenced in:

Oxysterol-binding Protein Family

Other entries for this name:
alt prot [950aa] oxysterol-binding protein-like 1A isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         22           2
 C cysteine            2.3         10           2
 D aspartate           5.3         23           2
 E glutamate           8.7         38           2
 F phenylalanine       4.3         19           1
 G glycine             5.5         24           3
 H histidine           2.7         12           2
 I isoleucine          5.9         26           2
 K lysine              8.5         37           3
 L leucine             7.6         33           2
 M methionine          2.7         12           1
 N asparagine          5.5         24           2
 P proline             5.7         25           2
 Q glutamine           2.7         12           1
 R arginine            4.3         19           1
 S serine              8.0         35           2
 T threonine           4.3         19           1
 V valine              4.6         20           1
 W tryptophan          2.5         11           1
 Y tyrosine            3.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol-binding protein-like 1A isoform A 
OSBPL1A               1.000   oxysterol-binding protein-like 1A isoform B 
OSBPL2                0.727   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL2                0.727   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBPL3                0.299   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL3                0.299   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.299   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.299   oxysterol-binding protein-like protein 3 isoform a [...
OSBP                  0.298   oxysterol binding protein 
OSBPL6                0.297   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.297   oxysterol-binding protein-like protein 6 isoform a [...
OSBP2                 0.290   oxysterol binding protein 2 isoform a 
OSBPL7                0.286   oxysterol-binding protein-like protein 7 
OSBPL8                0.132   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.132   oxysterol-binding protein-like protein 8 isoform a [...
OSBPL5                0.128   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.128   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.128   oxysterol-binding protein-like protein 5 isoform b [...
OSBPL9                0.111   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.111   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.111   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.111   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.111   oxysterol binding protein-like 9 isoform b 
OSBPL9                0.111   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.111   oxysterol binding protein-like 9 isoform a 
OSBPL11               0.096   oxysterol binding protein-like 11 
OSBPL10               0.092   oxysterol-binding protein-like protein 10 
MINK1                 0.013   misshapen/NIK-related kinase isoform 4 
MINK1                 0.013   misshapen/NIK-related kinase isoform 2 
MINK1                 0.013   misshapen/NIK-related kinase isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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