Guide to the Human Genome
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Name: NHP2 Sequence: fasta or formatted (90aa) NCBI GI: 77812674
Description:

nucleolar protein family A, member 2 isoform b

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [153aa] nucleolar protein family A, member 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0          9           1
 C cysteine            2.2          2           1
 D aspartate           2.2          2           1
 E glutamate           6.7          6           1
 F phenylalanine       1.1          1           1
 G glycine             5.6          5           1
 H histidine           0.0          0           0
 I isoleucine          4.4          4           1
 K lysine             13.3         12           2
 L leucine             5.6          5           2
 M methionine          1.1          1           1
 N asparagine          3.3          3           1
 P proline             8.9          8           2
 Q glutamine          10.0          9           1
 R arginine            6.7          6           2
 S serine              3.3          3           1
 T threonine           4.4          4           1
 V valine              7.8          7           1
 W tryptophan          1.1          1           1
 Y tyrosine            2.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein family A, member 2 isoform b [Homo... 
NHP2                  0.824   nucleolar protein family A, member 2 isoform a 
NHP2L1                0.101   NHP2 non-histone chromosome protein 2-like 1 
NHP2L1                0.101   NHP2 non-histone chromosome protein 2-like 1 
RPL21                 0.025   ribosomal protein L21 
RB1CC1                0.019   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.019   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
OR52E2                0.013   olfactory receptor, family 52, subfamily E, member 2...
PPP1R13L              0.013   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.013   protein phosphatase 1, regulatory subunit 13 like [H...
PLCD1                 0.013   phospholipase C, delta 1 isoform 2 
PLCD1                 0.013   phospholipase C, delta 1 isoform 1 
ZFAT                  0.013   zinc finger protein 406 isoform ZFAT-1 
ZFAT                  0.013   zinc finger protein 406 isoform TR-ZFAT 
KIAA1598              0.013   shootin1 isoform a 
KIAA1598              0.013   shootin1 isoform b 
UBTFL1                0.006   upstream binding transcription factor, RNA polymera...
USP19                 0.006   ubiquitin thioesterase 19 
IDH1                  0.000   isocitrate dehydrogenase 1 (NADP+), soluble 
MASP1                 0.000   mannan-binding lectin serine protease 1 isoform 1 pr...
MAML3                 0.000   mastermind-like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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