Guide to the Human Genome
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Name: OSBPL1A Sequence: fasta or formatted (950aa) NCBI GI: 19718741
Description:

oxysterol-binding protein-like 1A isoform B

Referenced in:

Oxysterol-binding Protein Family

Other entries for this name:
alt prot [437aa] oxysterol-binding protein-like 1A isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         64           3
 C cysteine            2.5         24           2
 D aspartate           5.1         48           2
 E glutamate           9.7         92           4
 F phenylalanine       3.6         34           2
 G glycine             4.9         47           3
 H histidine           3.3         31           2
 I isoleucine          4.2         40           2
 K lysine              7.6         72           3
 L leucine            10.0         95           3
 M methionine          2.2         21           1
 N asparagine          5.1         48           2
 P proline             4.1         39           2
 Q glutamine           4.1         39           2
 R arginine            5.2         49           1
 S serine              7.4         70           2
 T threonine           4.8         46           2
 V valine              5.1         48           2
 W tryptophan          1.8         17           1
 Y tyrosine            2.7         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol-binding protein-like 1A isoform B 
OSBPL1A               0.464   oxysterol-binding protein-like 1A isoform A 
OSBPL2                0.340   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL2                0.340   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBP2                 0.162   oxysterol binding protein 2 isoform a 
OSBP                  0.160   oxysterol binding protein 
OSBPL3                0.141   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.141   oxysterol-binding protein-like protein 3 isoform a [...
OSBPL3                0.141   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL3                0.141   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL6                0.141   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.141   oxysterol-binding protein-like protein 6 isoform a [...
OSBPL7                0.136   oxysterol-binding protein-like protein 7 
OSBPL9                0.073   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.068   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.068   oxysterol binding protein-like 9 isoform f 
OSBPL8                0.061   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.061   oxysterol-binding protein-like protein 8 isoform a [...
OSBPL5                0.059   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.059   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.059   oxysterol-binding protein-like protein 5 isoform b [...
OSBPL9                0.058   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.056   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.056   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.055   oxysterol binding protein-like 9 isoform b 
OSBPL11               0.044   oxysterol binding protein-like 11 
OSBPL10               0.043   oxysterol-binding protein-like protein 10 
TNKS2                 0.039   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.038   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANK1                  0.034   ankyrin 1 isoform 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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