Guide to the Human Genome
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Name: WDR89 Sequence: fasta or formatted (387aa) NCBI GI: 18087841
Description:

WD repeat domain 89

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt mRNA [387aa] WD repeat domain 89
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         18           2
 C cysteine            3.1         12           1
 D aspartate           7.8         30           3
 E glutamate           5.2         20           2
 F phenylalanine       3.1         12           1
 G glycine             7.2         28           2
 H histidine           3.4         13           1
 I isoleucine          5.4         21           2
 K lysine              6.2         24           2
 L leucine             8.3         32           3
 M methionine          2.1          8           1
 N asparagine          6.2         24           1
 P proline             2.1          8           1
 Q glutamine           3.1         12           1
 R arginine            4.1         16           2
 S serine              8.8         34           2
 T threonine           6.5         25           2
 V valine              8.0         31           2
 W tryptophan          1.8          7           2
 Y tyrosine            3.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 89 
WDR89                 1.000   WD repeat domain 89 
MORG1                 0.035   mitogen-activated protein kinase organizer 1 
MORG1                 0.035   mitogen-activated protein kinase organizer 1 
KATNB1                0.028   katanin p80 subunit B 1 
NUP43                 0.028   nucleoporin 43kDa 
WDR5B                 0.028   WD repeat domain 5B 
WDTC1                 0.027   WD and tetratricopeptide repeats 1 
WDR17                 0.027   WD repeat domain 17 isoform 2 
WDR17                 0.027   WD repeat domain 17 isoform 1 
DCAF13                0.027   WD repeats and SOF1 domain containing 
EML2                  0.027   echinoderm microtubule associated protein like 2 [Hom...
WDR5                  0.026   WD repeat domain 5 
WDR5                  0.026   WD repeat domain 5 
GNB5                  0.026   guanine nucleotide-binding protein, beta-5 subunit is...
GNB5                  0.026   guanine nucleotide-binding protein, beta-5 subunit i...
PRPF19                0.026   PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom...
TAF5L                 0.026   PCAF associated factor 65 beta isoform a 
GNB3                  0.026   guanine nucleotide-binding protein, beta-3 subunit [H...
RBBP7                 0.025   retinoblastoma binding protein 7 
UTP15                 0.025   UTP15, U3 small nucleolar ribonucleoprotein, homolog...
SNRNP40               0.025   WD repeat domain 57 (U5 snRNP specific) 
WDR51B                0.025   WD repeat domain 51B 
WDR24                 0.023   WD repeat domain 24 
WDR69                 0.023   WD repeat domain 69 
RFWD2                 0.023   ring finger and WD repeat domain 2 isoform a 
RFWD2                 0.023   ring finger and WD repeat domain 2 isoform d24 [Homo...
RBBP4                 0.021   retinoblastoma binding protein 4 isoform c 
RBBP4                 0.021   retinoblastoma binding protein 4 isoform b 
RBBP4                 0.021   retinoblastoma binding protein 4 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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