Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 17998698
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17998698 GATA binding protein 5 [Homo sapiens]
(397 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17998698 GATA binding protein 5 [Homo sapiens] 826 0.0
gi|33188461 GATA binding protein 4 [Homo sapiens] 327 2e-89
gi|40288197 GATA binding protein 6 [Homo sapiens] 320 2e-87
gi|224611699 GATA binding protein 2 isoform 1 [Homo sapiens] 223 2e-58
gi|20070352 GATA binding protein 2 isoform 1 [Homo sapiens] 223 2e-58
gi|50541959 GATA binding protein 3 isoform 1 [Homo sapiens] 210 2e-54
gi|4503929 GATA binding protein 3 isoform 2 [Homo sapiens] 208 8e-54
gi|4503925 GATA binding protein 1 [Homo sapiens] 207 1e-53
gi|224611701 GATA binding protein 2 isoform 2 [Homo sapiens] 191 1e-48
gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens] 75 1e-13
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 53 6e-07
gi|239756839 PREDICTED: hypothetical protein [Homo sapiens] 46 7e-05
gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo ... 46 7e-05
gi|239745851 PREDICTED: hypothetical protein XP_002343605 [Homo ... 46 7e-05
gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo ... 46 7e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 45 1e-04
gi|150378539 piccolo isoform 1 [Homo sapiens] 45 1e-04
gi|157266269 GATA like protein-1 [Homo sapiens] 45 1e-04
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 45 1e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 2e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 2e-04
gi|154146199 sal-like 3 [Homo sapiens] 44 2e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens] 43 6e-04
gi|19924097 synapsin I isoform Ib [Homo sapiens] 43 6e-04
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 43 6e-04
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 43 6e-04
gi|121114296 caudal type homeobox 1 [Homo sapiens] 42 0.001
gi|64084766 fidgetin [Homo sapiens] 41 0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni... 41 0.002
>gi|17998698 GATA binding protein 5 [Homo sapiens]
Length = 397
Score = 826 bits (2134), Expect = 0.0
Identities = 397/397 (100%), Positives = 397/397 (100%)
Query: 1 MYQSLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAA 60
MYQSLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAA
Sbjct: 1 MYQSLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAA 60
Query: 61 RPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGAL 120
RPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGAL
Sbjct: 61 RPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGAL 120
Query: 121 LPREQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGSVLHGLPGRRPTFVSDFLE 180
LPREQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGSVLHGLPGRRPTFVSDFLE
Sbjct: 121 LPREQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGSVLHGLPGRRPTFVSDFLE 180
Query: 181 EFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRLSSSRRAG 240
EFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRLSSSRRAG
Sbjct: 181 EFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRLSSSRRAG 240
Query: 241 LCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKA 300
LCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKA
Sbjct: 241 LCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKA 300
Query: 301 RGSSGSTRNASASPSAVASTDSSAATSKAKPSLASPVCPGPSMAPQASGQEDDSLAPGHL 360
RGSSGSTRNASASPSAVASTDSSAATSKAKPSLASPVCPGPSMAPQASGQEDDSLAPGHL
Sbjct: 301 RGSSGSTRNASASPSAVASTDSSAATSKAKPSLASPVCPGPSMAPQASGQEDDSLAPGHL 360
Query: 361 EFKFEPEDFAFPSTAPSPQAGLRGALRQEAWCALALA 397
EFKFEPEDFAFPSTAPSPQAGLRGALRQEAWCALALA
Sbjct: 361 EFKFEPEDFAFPSTAPSPQAGLRGALRQEAWCALALA 397
>gi|33188461 GATA binding protein 4 [Homo sapiens]
Length = 442
Score = 327 bits (837), Expect = 2e-89
Identities = 205/446 (45%), Positives = 256/446 (57%), Gaps = 62/446 (13%)
Query: 1 MYQSLALAAS--PRQAAY--ADSGSFLHAPGAGS-PMFVPPARVPSM---LSYLSG---- 48
MYQSLA+AA+ P AY G+F+H GA S P++VP RVPS LSYL G
Sbjct: 1 MYQSLAMAANHGPPPGAYEAGGPGAFMHGAGAASSPVYVPTPRVPSSVLGLSYLQGGGAG 60
Query: 49 -------------CEPSPQPPELAARPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPF 95
P PGW+Q A AD +A+ P P P PG T
Sbjct: 61 SASGGASGGSSGGAASGAGPGTQQGSPGWSQ-AGADGAAYTP-PPVSPRFSFPGTTGSLA 118
Query: 96 AHSPSGPGSGGSAGGRDGSAYQGALLPREQFAAPLGRP-VGTSYSATYPAYVSPDVAQSW 154
A + + +A G A L REQ+ GR SYS+ YPAY++ DV SW
Sbjct: 119 AAAAAAAAREAAAYSSGGGAAGAGLAGREQY----GRAGFAGSYSSPYPAYMA-DVGASW 173
Query: 155 ------TAGPFDGSVLHGLPGRRPTFVS----DFLEEFPGEGRECVNCGALSTPLWRRDG 204
+AGPFD VLH LPGR D ++F EGRECVNCGA+STPLWRRDG
Sbjct: 174 AAAAAASAGPFDSPVLHSLPGRANPAARHPNLDMFDDF-SEGRECVNCGAMSTPLWRRDG 232
Query: 205 TGHYLCNACGLYHKMNGVNRPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVC 264
TGHYLCNACGLYHKMNG+NRPL++PQ+RLS+SRR GL C NC TT TTLWRRN+EGEPVC
Sbjct: 233 TGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVC 292
Query: 265 NACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKARGSSGSTRNASASPSAVASTDSSA 324
NACGLYMKLHGVPRPLAM+KE IQTRKRKPK + K++ + + + S P++ AS++SS
Sbjct: 293 NACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAAPSGSESLPPASGASSNSSN 352
Query: 325 ATS---------KAKPSLASPVCPGPSMAP----QASGQEDDSLAPGHLEFKFEPEDFAF 371
AT+ K +P L+S S++ A S+ P K P+ +A
Sbjct: 353 ATTSSSEEMRPIKTEPGLSSHYGHSSSVSQTFSVSAMSGHGPSIHPVLSALKLSPQGYAS 412
Query: 372 PSTAPSPQAGLRGALRQEAWCALALA 397
P + SPQ + +Q++W +L LA
Sbjct: 413 P-VSQSPQT----SSKQDSWNSLVLA 433
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 320 bits (819), Expect = 2e-87
Identities = 197/454 (43%), Positives = 254/454 (55%), Gaps = 62/454 (13%)
Query: 1 MYQSLALAASPRQAAYADS-GSFLH--------APGAGSPMFVPPARVPSMLSYL----- 46
MYQ+LA +S AAY + G F+H A A SP++VP RV SML L
Sbjct: 147 MYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQ 206
Query: 47 -SGCEPSPQPPELAARPGWAQTATADSSAFGPG--SPHPPAAHPPGATA--------FPF 95
SG P+ A PGW Q A+ADS +G G + AA P GA + FP+
Sbjct: 207 GSGSGPANHAGGAGAHPGWPQ-ASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSARFPY 265
Query: 96 AHSP-------------SGPGSGGSAGGRDGSAYQGALLPREQFAAPLG--RPVGTSYS- 139
+ SP + GSGG+ G G + A+ RE + L RP+ +Y
Sbjct: 266 SPSPPMANGAAREPGGYAAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHH 325
Query: 140 ---------ATYPAYVSPDVAQSWTAGPFDGSVLHGLPGRRPTFV-------SDFLEEFP 183
+ Y YV + +W AGPF+ VLH L R + +D LE+
Sbjct: 326 HHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLHSLQSRAGAPLPVPRGPSADLLEDL- 384
Query: 184 GEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRLSSSRRAGLCC 243
E RECVNCG++ TPLWRRDGTGHYLCNACGLY KMNG++RPL++PQKR+ SSRR GL C
Sbjct: 385 SESRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRLGLSC 444
Query: 244 TNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKARGS 303
NCHTT TTLWRRN+EGEPVCNACGLYMKLHGVPRPLAMKKE IQTRKRKPK I K++
Sbjct: 445 ANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNINKSKTC 504
Query: 304 SGSTRNASASPSAVASTDSSAATSKAKPSLASPVCPGPSMAPQASGQEDDSLAPGHLEFK 363
SG++ N+ S++S + P+ P G AP +G +S P + E K
Sbjct: 505 SGNSNNSIPMTPTSTSSNSDDCSKNTSPT-TQPTASGAG-APVMTG-AGESTNPENSELK 561
Query: 364 FEPEDFAFPSTAPSPQAGLRGALRQEAWCALALA 397
+ +D + + + A + ++R ++WCALALA
Sbjct: 562 YSGQDGLYIGVSLASPAEVTSSVRPDSWCALALA 595
>gi|224611699 GATA binding protein 2 isoform 1 [Homo sapiens]
Length = 480
Score = 223 bits (568), Expect = 2e-58
Identities = 124/246 (50%), Positives = 147/246 (59%), Gaps = 18/246 (7%)
Query: 68 ATADSSAFG-PGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAG---GRDGSAYQGALL-- 121
A + S FG P +P + P T A SP+ +GGSA +DG YQ +L
Sbjct: 164 AHSGSHLFGFPPTPPKEVSPDPSTTG---AASPASSSAGGSAARGEDKDGVKYQVSLTES 220
Query: 122 -------PREQFAAPLGRPVGTSYSA-TYPAYVSPDVAQSWTAGPFDGSVLHGLPGRRPT 173
P A +G T + TYP+YV P A +++G F G P T
Sbjct: 221 MKMESGSPLRPGLATMGTQPATHHPIPTYPSYV-PAAAHDYSSGLFHPGGFLGGPASSFT 279
Query: 174 FVSDFLEEFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRL 233
EGRECVNCGA +TPLWRRDGTGHYLCNACGLYHKMNG NRPL++P++RL
Sbjct: 280 PKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRL 339
Query: 234 SSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRK 293
S++RRAG CC NC TT TTLWRRN+ G+PVCNACGLY KLH V RPL MKKE IQTR RK
Sbjct: 340 SAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRK 399
Query: 294 PKTIAK 299
+K
Sbjct: 400 MSNKSK 405
Score = 81.6 bits (200), Expect = 1e-15
Identities = 91/333 (27%), Positives = 127/333 (38%), Gaps = 53/333 (15%)
Query: 22 FLHAPGAGSPMFVPPARVPSMLSY------LSG---CEP----SPQPPELAARPGWAQTA 68
F H G+P + PA + +SY L+G C P SP P L A
Sbjct: 49 FNHLDSQGNPYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAA 108
Query: 69 TADS------SAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGALLP 122
A S F HP AA PG + PG+GG +GG GS+ +L P
Sbjct: 109 AAHHHNPWTVSPFSKTPLHPSAAGGPGGPLSVY------PGAGGGSGGGSGSSV-ASLTP 161
Query: 123 REQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFD----GSVLHGLPGRRPTFVSDF 178
AA G + + T P VSPD + + A P GS G +
Sbjct: 162 T---AAHSGSHL-FGFPPTPPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSL 217
Query: 179 LEEFPGEGRECVNCGALSTPLWRRDGTGHYLCN------------ACGLYHK---MNGVN 223
E E + G + + + T H + + GL+H + G
Sbjct: 218 TESMKMESGSPLRPGLAT--MGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPA 275
Query: 224 RPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMK 283
Q+ + S G C NC T T LWRR+ G +CNACGLY K++G RPL
Sbjct: 276 SSFTPKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKP 335
Query: 284 KESIQTRKRKPKTIAKARGSSGS--TRNASASP 314
K + +R A + ++ + RNA+ P
Sbjct: 336 KRRLSAARRAGTCCANCQTTTTTLWRRNANGDP 368
>gi|20070352 GATA binding protein 2 isoform 1 [Homo sapiens]
Length = 480
Score = 223 bits (568), Expect = 2e-58
Identities = 124/246 (50%), Positives = 147/246 (59%), Gaps = 18/246 (7%)
Query: 68 ATADSSAFG-PGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAG---GRDGSAYQGALL-- 121
A + S FG P +P + P T A SP+ +GGSA +DG YQ +L
Sbjct: 164 AHSGSHLFGFPPTPPKEVSPDPSTTG---AASPASSSAGGSAARGEDKDGVKYQVSLTES 220
Query: 122 -------PREQFAAPLGRPVGTSYSA-TYPAYVSPDVAQSWTAGPFDGSVLHGLPGRRPT 173
P A +G T + TYP+YV P A +++G F G P T
Sbjct: 221 MKMESGSPLRPGLATMGTQPATHHPIPTYPSYV-PAAAHDYSSGLFHPGGFLGGPASSFT 279
Query: 174 FVSDFLEEFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRL 233
EGRECVNCGA +TPLWRRDGTGHYLCNACGLYHKMNG NRPL++P++RL
Sbjct: 280 PKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRL 339
Query: 234 SSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRK 293
S++RRAG CC NC TT TTLWRRN+ G+PVCNACGLY KLH V RPL MKKE IQTR RK
Sbjct: 340 SAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRK 399
Query: 294 PKTIAK 299
+K
Sbjct: 400 MSNKSK 405
Score = 81.6 bits (200), Expect = 1e-15
Identities = 91/333 (27%), Positives = 127/333 (38%), Gaps = 53/333 (15%)
Query: 22 FLHAPGAGSPMFVPPARVPSMLSY------LSG---CEP----SPQPPELAARPGWAQTA 68
F H G+P + PA + +SY L+G C P SP P L A
Sbjct: 49 FNHLDSQGNPYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAA 108
Query: 69 TADS------SAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGALLP 122
A S F HP AA PG + PG+GG +GG GS+ +L P
Sbjct: 109 AAHHHNPWTVSPFSKTPLHPSAAGGPGGPLSVY------PGAGGGSGGGSGSSV-ASLTP 161
Query: 123 REQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFD----GSVLHGLPGRRPTFVSDF 178
AA G + + T P VSPD + + A P GS G +
Sbjct: 162 T---AAHSGSHL-FGFPPTPPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSL 217
Query: 179 LEEFPGEGRECVNCGALSTPLWRRDGTGHYLCN------------ACGLYHK---MNGVN 223
E E + G + + + T H + + GL+H + G
Sbjct: 218 TESMKMESGSPLRPGLAT--MGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPA 275
Query: 224 RPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMK 283
Q+ + S G C NC T T LWRR+ G +CNACGLY K++G RPL
Sbjct: 276 SSFTPKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKP 335
Query: 284 KESIQTRKRKPKTIAKARGSSGS--TRNASASP 314
K + +R A + ++ + RNA+ P
Sbjct: 336 KRRLSAARRAGTCCANCQTTTTTLWRRNANGDP 368
>gi|50541959 GATA binding protein 3 isoform 1 [Homo sapiens]
Length = 444
Score = 210 bits (534), Expect = 2e-54
Identities = 129/285 (45%), Positives = 159/285 (55%), Gaps = 45/285 (15%)
Query: 78 GSPHPPAAHPPGATA-----------FPFAHSP----------SGPGSGGSA--GGRDGS 114
GSP P + +PP +++ F F +P S PGS GSA ++
Sbjct: 125 GSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECL 184
Query: 115 AYQGALLPREQFAAPLGRPV-----GTSYSATYPAYVSPDVAQSWTAGPFD-GSVLHGLP 168
YQ L + + R G S S +P P +++G F S+L G P
Sbjct: 185 KYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLLGGSP 244
Query: 169 G-----RRPTFVSDFLEEFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVN 223
RP S EGRECVNCGA STPLWRRDGTGHYLCNACGLYHKMNG N
Sbjct: 245 TGFGCKSRPKARSST------EGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQN 298
Query: 224 RPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMK 283
RPL++P++RLS++RRAG C NC TT TTLWRRN+ G+PVCNACGLY KLH + RPL MK
Sbjct: 299 RPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMK 358
Query: 284 KESIQTRKR----KPKTIAKARGS-SGSTRNASASPSAVASTDSS 323
KE IQTR R K K K S +N+S +P+A++ SS
Sbjct: 359 KEGIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSS 403
>gi|4503929 GATA binding protein 3 isoform 2 [Homo sapiens]
Length = 443
Score = 208 bits (529), Expect = 8e-54
Identities = 128/285 (44%), Positives = 158/285 (55%), Gaps = 46/285 (16%)
Query: 78 GSPHPPAAHPPGATA-----------FPFAHSP----------SGPGSGGSA--GGRDGS 114
GSP P + +PP +++ F F +P S PGS GSA ++
Sbjct: 125 GSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECL 184
Query: 115 AYQGALLPREQFAAPLGRPV-----GTSYSATYPAYVSPDVAQSWTAGPFD-GSVLHGLP 168
YQ L + + R G S S +P P +++G F S+L G P
Sbjct: 185 KYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLLGGSP 244
Query: 169 G-----RRPTFVSDFLEEFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVN 223
RP S GRECVNCGA STPLWRRDGTGHYLCNACGLYHKMNG N
Sbjct: 245 TGFGCKSRPKARSS-------TGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQN 297
Query: 224 RPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMK 283
RPL++P++RLS++RRAG C NC TT TTLWRRN+ G+PVCNACGLY KLH + RPL MK
Sbjct: 298 RPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMK 357
Query: 284 KESIQTRKR----KPKTIAKARGS-SGSTRNASASPSAVASTDSS 323
KE IQTR R K K K S +N+S +P+A++ SS
Sbjct: 358 KEGIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSS 402
>gi|4503925 GATA binding protein 1 [Homo sapiens]
Length = 413
Score = 207 bits (528), Expect = 1e-53
Identities = 142/360 (39%), Positives = 173/360 (48%), Gaps = 50/360 (13%)
Query: 26 PGAGS-------PMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPG 78
PG GS P FV PA V S P+ + AA TATA ++A
Sbjct: 4 PGLGSLGTSEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYY 63
Query: 79 SPHPPAAHPPGATAFPFAHSPSG-PGSGGSAG---GRDGSAYQGALLPREQFAAP----- 129
H P +P + G PG AG G+ G + P + + P
Sbjct: 64 RDAEAYRHSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPTREDSPPQAVED 123
Query: 130 ------------------------LGRPVGTSYSATYPAYVSPDVAQSW---TAGPFDGS 162
LG + +S AY PD + ++ T P + S
Sbjct: 124 LDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN-S 182
Query: 163 VLHGLPGRRPTFVSDFLEEFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGV 222
+ P R T L P E RECVNCGA +TPLWRRD TGHYLCNACGLYHKMNG
Sbjct: 183 AAYSSPKLRGT-----LPLPPCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQ 237
Query: 223 NRPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAM 282
NRPL+RP+KRL S+RAG CTNC TT TTLWRRN+ G+PVCNACGLY KLH V RPL M
Sbjct: 238 NRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTM 297
Query: 283 KKESIQTRKRKPKTIA-KARGSSGSTRNASASPSAVASTDSSAATSKAKPSLASPVCPGP 341
+K+ IQTR RK K RGSS A+ P+ + + S +AS + GP
Sbjct: 298 RKDGIQTRNRKASGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGP 357
>gi|224611701 GATA binding protein 2 isoform 2 [Homo sapiens]
Length = 466
Score = 191 bits (485), Expect = 1e-48
Identities = 115/246 (46%), Positives = 136/246 (55%), Gaps = 32/246 (13%)
Query: 68 ATADSSAFG-PGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAG---GRDGSAYQGALL-- 121
A + S FG P +P + P T A SP+ +GGSA +DG YQ +L
Sbjct: 164 AHSGSHLFGFPPTPPKEVSPDPSTTG---AASPASSSAGGSAARGEDKDGVKYQVSLTES 220
Query: 122 -------PREQFAAPLGRPVGTSYSA-TYPAYVSPDVAQSWTAGPFDGSVLHGLPGRRPT 173
P A +G T + TYP+YV P A +++G F G P T
Sbjct: 221 MKMESGSPLRPGLATMGTQPATHHPIPTYPSYV-PAAAHDYSSGLFHPGGFLGGPASSFT 279
Query: 174 FVSDFLEEFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRL 233
EGRECVNCGA +TPLWRRDGTGHYLCNACGLYHKMNG NRPL++P++RL
Sbjct: 280 PKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRL 339
Query: 234 SSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRK 293
TT TTLWRRN+ G+PVCNACGLY KLH V RPL MKKE IQTR RK
Sbjct: 340 --------------TTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRK 385
Query: 294 PKTIAK 299
+K
Sbjct: 386 MSNKSK 391
>gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens]
Length = 1294
Score = 75.1 bits (183), Expect = 1e-13
Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 220 NGVNRPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRP 279
+G N+ Q L R +G+ C NC TT T+LWR+N+ G VCNACGLY KLH PRP
Sbjct: 886 SGENKSKDESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRP 945
Query: 280 LAMKKES-------IQTRKR-KPKTI------AKARGSSGSTRNASASPSAVASTDSSAA 325
L + K++ +TRKR P+ + + RGS + + SP S D
Sbjct: 946 LNIIKQNNGEQIIRRRTRKRLNPEALQAEQLNKQQRGS--NEEQVNGSPLERRSEDHLTE 1003
Query: 326 TSKAK---PSLASPVCPGPSMAPQASGQE----------DDSLAPGHLEFKFEPEDFAFP 372
+ + + PSL+ G S+ S Q+ + P H++ K E P
Sbjct: 1004 SHQREIPLPSLSKYEAQG-SLTKSHSAQQPVLVSQTLDIHKRMQPLHIQIKSPQESTGDP 1062
Query: 373 STAPSPQAG 381
+ S G
Sbjct: 1063 GNSSSVSEG 1071
Score = 55.1 bits (131), Expect = 1e-07
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 184 GEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPL 226
G G C NC T LWR++ G Y+CNACGLY K++ RPL
Sbjct: 904 GSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPL 946
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 52.8 bits (125), Expect = 6e-07
Identities = 100/441 (22%), Positives = 165/441 (37%), Gaps = 73/441 (16%)
Query: 9 ASPRQAAYADSGSFLHAPGAGSPMF-VPPARVPSMLSYLSGCEPSPQPPELAARPGWAQT 67
ASPR A + + +P + AR P+ L+ LS S PP A P ++T
Sbjct: 2271 ASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALS-LTGSGTPPTAANYPSSSRT 2329
Query: 68 ATADSSA--FGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGALLPREQ 125
A +SA GP S H A + A +P+ S A G+ +P
Sbjct: 2330 PQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSA 2389
Query: 126 FAAPLGRP----VGTSYSATYPAYVSPDVAQSWTAGPFDGSVLHGLPGRR---------- 171
+ GR + + S T P+ S S A P S + P +
Sbjct: 2390 YERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERA-PSPSSRMGQAPSQSLLPPAQDQPR 2448
Query: 172 ---PTFVSD-----FLEEFPGEGRECVNCGALSTPLWRR-DGTGHYLCNACGLYHK---- 218
P+ SD + P G + ++ GA++T D G A G+ H
Sbjct: 2449 SPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGE 2508
Query: 219 ---MNGVNRP----LVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYM 271
G +P ++P K SS + ++ +++++ +S G ++ G +
Sbjct: 2509 PPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSL 2568
Query: 272 K------LHGVPRPLAMKKESIQTRKRKPKTIAKAR------------GSSGSTRNASAS 313
L VP P KE+++ + T AK + SS S+ ++S+S
Sbjct: 2569 PVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSS 2628
Query: 314 PSAVASTDSSAATSKAKPSLASPVCPGPSMAPQASGQED---------------DSLAPG 358
S+ +S+ SS+++S + S SP PGP P+ + + DSL
Sbjct: 2629 SSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDS 2688
Query: 359 HLEFKFEPEDFAFPSTAPSPQ 379
+ P + PS PSP+
Sbjct: 2689 R-SLSYSPVERRRPSPQPSPR 2708
Score = 32.3 bits (72), Expect = 0.77
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 274 HGVPRPLAMKKESIQTRKRKPKT--IAKARGSSGSTRNASASPSAVASTDSSAATSKAKP 331
H P P + +K + RKR T K+R + ST SAS S + + S +A +K
Sbjct: 229 HRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHT 288
Query: 332 SLASPVCPGPSMAPQASGQEDDSLAP 357
+ + P P ASG+ + AP
Sbjct: 289 TALAGRSPSP-----ASGRRGEGDAP 309
Score = 31.2 bits (69), Expect = 1.7
Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 24/137 (17%)
Query: 262 PVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKARGSSGSTRNAS--ASPSAVAS 319
P +A GL ++ VP P+ + I A ++ + +A A P+AV
Sbjct: 2197 PSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNL 2256
Query: 320 TDSSAATSKAKPSLASPVCPGPSMAPQASGQEDDSLAPGHLEFKFEPEDFAFPSTAPSPQ 379
DS + A +LAS P ++AP A D P T +P
Sbjct: 2257 ADSRTPAAAAAMNLAS---PRTAVAPSAVNLAD-------------------PRTPTAPA 2294
Query: 380 AGLRGALRQEAWCALAL 396
L GA A AL+L
Sbjct: 2295 VNLAGARTPAALAALSL 2311
>gi|239756839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 743
Score = 45.8 bits (107), Expect = 7e-05
Identities = 49/171 (28%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 228 RPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGE-------------PVCNACGLYMKLH 274
R + R RRA C + C WR+ +G+ P ACG +
Sbjct: 149 RTKSRTQRLRRAWSCNSGCSLMAAMNWRKCEKGKRGSGSSRKKSFRAPGSPACGPGRRPA 208
Query: 275 GVPRPLAMKKESIQTRKRKPKT-IAKARGSSGSTRNASASPSAVASTDSSAATSKAKPSL 333
G P P A+ + R + RG+ +R+ SA+ SA +T S A + PSL
Sbjct: 209 GTPMPAALTPAAHVPRASTARMHCCTKRGTRLLSRSHSAA-SAQPNTWSRAEAHQLLPSL 267
Query: 334 ASPVCPGPSMAPQASGQEDDSLAPGHLEFKFEPEDFA--FPSTAPSPQAGL 382
PGP PQASG D +L P L+ E+ A P + P++ L
Sbjct: 268 RPVPVPGP-RPPQASGTFDVALLPQRLQCGPPLEELAELLPKRSLDPKSTL 317
>gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo
sapiens]
Length = 697
Score = 45.8 bits (107), Expect = 7e-05
Identities = 49/171 (28%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 228 RPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGE-------------PVCNACGLYMKLH 274
R + R RRA C + C WR+ +G+ P ACG +
Sbjct: 149 RTKSRTQRLRRAWSCNSGCSLMAAMNWRKCEKGKRGSGSSRKKSFRAPGSPACGPGRRPA 208
Query: 275 GVPRPLAMKKESIQTRKRKPKT-IAKARGSSGSTRNASASPSAVASTDSSAATSKAKPSL 333
G P P A+ + R + RG+ +R+ SA+ SA +T S A + PSL
Sbjct: 209 GTPMPAALTPAAHVPRASTARMHCCTKRGTRLLSRSHSAA-SAQPNTWSRAEAHQLLPSL 267
Query: 334 ASPVCPGPSMAPQASGQEDDSLAPGHLEFKFEPEDFA--FPSTAPSPQAGL 382
PGP PQASG D +L P L+ E+ A P + P++ L
Sbjct: 268 RPVPVPGP-RPPQASGTFDVALLPQRLQCGPPLEELAELLPKRSLDPKSTL 317
>gi|239745851 PREDICTED: hypothetical protein XP_002343605 [Homo
sapiens]
Length = 500
Score = 45.8 bits (107), Expect = 7e-05
Identities = 49/171 (28%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 228 RPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGE-------------PVCNACGLYMKLH 274
R + R RRA C + C WR+ +G+ P ACG +
Sbjct: 149 RTKSRTQRLRRAWSCNSGCSLMAAMNWRKCEKGKRGSGSSRKKSFRAPGSPACGPGRRPA 208
Query: 275 GVPRPLAMKKESIQTRKRKPKT-IAKARGSSGSTRNASASPSAVASTDSSAATSKAKPSL 333
G P P A+ + R + RG+ +R+ SA+ SA +T S A + PSL
Sbjct: 209 GTPMPAALTPAAHVPRASTARMHCCTKRGTRLLSRSHSAA-SAQPNTWSRAEAHQLLPSL 267
Query: 334 ASPVCPGPSMAPQASGQEDDSLAPGHLEFKFEPEDFA--FPSTAPSPQAGL 382
PGP PQASG D +L P L+ E+ A P + P++ L
Sbjct: 268 RPVPVPGP-RPPQASGTFDVALLPQRLQCGPPLEELAELLPKRSLDPKSTL 317
>gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo
sapiens]
Length = 697
Score = 45.8 bits (107), Expect = 7e-05
Identities = 49/171 (28%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 228 RPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGE-------------PVCNACGLYMKLH 274
R + R RRA C + C WR+ +G+ P ACG +
Sbjct: 149 RTKSRTQRLRRAWSCNSGCSLMAAMNWRKCEKGKRGSGSSRKKSFRAPGSPACGPGRRPA 208
Query: 275 GVPRPLAMKKESIQTRKRKPKT-IAKARGSSGSTRNASASPSAVASTDSSAATSKAKPSL 333
G P P A+ + R + RG+ +R+ SA+ SA +T S A + PSL
Sbjct: 209 GTPMPAALTPAAHVPRASTARMHCCTKRGTRLLSRSHSAA-SAQPNTWSRAEAHQLLPSL 267
Query: 334 ASPVCPGPSMAPQASGQEDDSLAPGHLEFKFEPEDFA--FPSTAPSPQAGL 382
PGP PQASG D +L P L+ E+ A P + P++ L
Sbjct: 268 RPVPVPGP-RPPQASGTFDVALLPQRLQCGPPLEELAELLPKRSLDPKSTL 317
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 45.1 bits (105), Expect = 1e-04
Identities = 81/334 (24%), Positives = 109/334 (32%), Gaps = 51/334 (15%)
Query: 26 PGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPGSPHPPAA 85
PG S P + PS L +P PQ P A+P Q +A + PGS PP
Sbjct: 456 PGKTSAQQTGPTKPPSQLP--GPAKPPPQQPG-PAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 86 HPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGALLPREQFAAPLGRPVGTSYSATYPAY 145
P P SP PGS + GSA +P SA P+
Sbjct: 513 QPG-----PAKPSPQQPGSTKPPSQQPGSA----------------KP-----SAQQPSP 546
Query: 146 VSPDVAQSWTAGPFDGSVLHGLPGRRPTFVSDFLEEFPGEGRE---CVNCGALSTPLWRR 202
P QS GS G P + PT VS ++ P +G C C L
Sbjct: 547 AKPSAQQSTKPVSQTGS---GKPLQPPT-VSPSAKQPPSQGLPKTICPLCNTTELLLHVP 602
Query: 203 DGTGHYLCNAC-GLYHKMNGVNRPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGE 261
+ C C + G N P L+ + C NC +
Sbjct: 603 EKANFNTCTECQTTVCSLCGFN-----PNPHLTEVKE--WLCLNCQMKRAL----GGDLA 651
Query: 262 PVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKARGSSGSTRNASASPSAVAST- 320
PV ++ +K V A+ K S Q ++ PK A + P V
Sbjct: 652 PVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPT 711
Query: 321 --DSSAATSKAKPSLASPVCPGPSMAPQASGQED 352
S +A +K P S P P P ++D
Sbjct: 712 LHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQD 745
Score = 28.9 bits (63), Expect = 8.5
Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 21/131 (16%)
Query: 35 PPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPGSPHP----PAAHPPGA 90
PP + P+ G P+ QP ++PG A+ S P + P P PPG
Sbjct: 304 PPIQQPT-----PGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT 358
Query: 91 TAFPFAHSPSGPGSGGSAGGRDGSAYQGALLPREQFAAP--LGRPVGTSYS-ATYPAYVS 147
T P P GP + + G+ P + P L +P G + A P
Sbjct: 359 TKPP--AQPLGP-------AKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAK 409
Query: 148 PDVAQSWTAGP 158
P Q T P
Sbjct: 410 PPTQQVGTPKP 420
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 45.1 bits (105), Expect = 1e-04
Identities = 81/334 (24%), Positives = 109/334 (32%), Gaps = 51/334 (15%)
Query: 26 PGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPGSPHPPAA 85
PG S P + PS L +P PQ P A+P Q +A + PGS PP
Sbjct: 456 PGKTSAQQTGPTKPPSQLP--GPAKPPPQQPG-PAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 86 HPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGALLPREQFAAPLGRPVGTSYSATYPAY 145
P P SP PGS + GSA +P SA P+
Sbjct: 513 QPG-----PAKPSPQQPGSTKPPSQQPGSA----------------KP-----SAQQPSP 546
Query: 146 VSPDVAQSWTAGPFDGSVLHGLPGRRPTFVSDFLEEFPGEGRE---CVNCGALSTPLWRR 202
P QS GS G P + PT VS ++ P +G C C L
Sbjct: 547 AKPSAQQSTKPVSQTGS---GKPLQPPT-VSPSAKQPPSQGLPKTICPLCNTTELLLHVP 602
Query: 203 DGTGHYLCNAC-GLYHKMNGVNRPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGE 261
+ C C + G N P L+ + C NC +
Sbjct: 603 EKANFNTCTECQTTVCSLCGFN-----PNPHLTEVKE--WLCLNCQMKRAL----GGDLA 651
Query: 262 PVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKTIAKARGSSGSTRNASASPSAVAST- 320
PV ++ +K V A+ K S Q ++ PK A + P V
Sbjct: 652 PVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPT 711
Query: 321 --DSSAATSKAKPSLASPVCPGPSMAPQASGQED 352
S +A +K P S P P P ++D
Sbjct: 712 LHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQD 745
Score = 28.9 bits (63), Expect = 8.5
Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 21/131 (16%)
Query: 35 PPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPGSPHP----PAAHPPGA 90
PP + P+ G P+ QP ++PG A+ S P + P P PPG
Sbjct: 304 PPIQQPT-----PGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT 358
Query: 91 TAFPFAHSPSGPGSGGSAGGRDGSAYQGALLPREQFAAP--LGRPVGTSYS-ATYPAYVS 147
T P P GP + + G+ P + P L +P G + A P
Sbjct: 359 TKPP--AQPLGP-------AKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAK 409
Query: 148 PDVAQSWTAGP 158
P Q T P
Sbjct: 410 PPTQQVGTPKP 420
>gi|157266269 GATA like protein-1 [Homo sapiens]
Length = 271
Score = 45.1 bits (105), Expect = 1e-04
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 185 EGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGV--NRPLVRPQKRLSSSRRAGLC 242
E R C +C TPLWR G LCNACG+ +K G + + P+K + R G C
Sbjct: 202 EPRRCASCRTQRTPLWRDAEDGTPLCNACGIRYKKYGTRCSSCWLVPRKNVQPKRLCGRC 261
Score = 43.9 bits (102), Expect = 3e-04
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 243 CTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHG 275
C +C T T LWR +G P+CNACG+ K +G
Sbjct: 206 CASCRTQRTPLWRDAEDGTPLCNACGIRYKKYG 238
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 44.7 bits (104), Expect = 1e-04
Identities = 45/152 (29%), Positives = 56/152 (36%), Gaps = 24/152 (15%)
Query: 26 PGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPGSPHPP-- 83
P A +P PPA P +P P PP RP + ATA+ P P P
Sbjct: 784 PSAKAPSPPPPAEAPK-----EPLQPEPAPP----RP--SGPATAEDPGRRPVLPQRPPE 832
Query: 84 --AAHPPGATAFPFAHSPSGPGSGGSAGGR------DGSAYQGALLPREQFAAPLGRPVG 135
PPG+T +GP +G GR DG G + E FA G P
Sbjct: 833 ERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKS 892
Query: 136 ---TSYSATYPAYVSPDVAQSWTAGPFDGSVL 164
S A P+ VS + P DG V+
Sbjct: 893 PPVASPGAPVPSLVSFSAGLTQKPFPSDGGVV 924
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 44.3 bits (103), Expect = 2e-04
Identities = 50/172 (29%), Positives = 63/172 (36%), Gaps = 15/172 (8%)
Query: 6 ALAASPRQAAYADSGSFL----HAPGAG---SPMFVPPARVPSMLSY-LSGCEPSPQPPE 57
ALA P QA + SF +P A SP+ PP + P +L+ L PSP
Sbjct: 522 ALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 581
Query: 58 LAARPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQ 117
P T D+S GP A PP P + SPS SG G SA
Sbjct: 582 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP----PPSRSPSSTLSGPDLAGHSSSA-- 635
Query: 118 GALLPREQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGSVLHGLPG 169
P E G G + S A ++ +W+ GP G PG
Sbjct: 636 -TSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG 686
Score = 35.0 bits (79), Expect = 0.12
Identities = 30/88 (34%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 7 LAASPRQAAYADSGSFLHAPGAGSPM------FVPPARVPSMLSYLSGCEPSPQPPELAA 60
LA QA A + L AP + P F PPA P S PS PP LAA
Sbjct: 420 LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPS---ATPPSQAPPSLAA 476
Query: 61 RPGWAQTATADSSAFGPGSPHPPAAHPP 88
P + S P + PP A PP
Sbjct: 477 PPLQVPPSPPASPPMSPSATPPPQAPPP 504
Score = 31.6 bits (70), Expect = 1.3
Identities = 48/188 (25%), Positives = 66/188 (35%), Gaps = 38/188 (20%)
Query: 6 ALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPEL------- 58
+LAA P Q + S +P A P PP P L +P PQ P
Sbjct: 473 SLAAPPLQVPPSPPASPPMSPSATPPPQAPP---PLAAPPLQLAKPPPQAPPALATPPLQ 529
Query: 59 ------AARPGWAQTATADSSAFGPGSPHPPAAH----------PPGATAFPFAHSPSGP 102
A+ PG A + + S P + PP A PP A P +P P
Sbjct: 530 ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRP 589
Query: 103 GSGGSAGGRDGSAYQGALL------PREQFAAPLGRP--VGTSYSATYPAYVSPDVAQSW 154
+ G G AL P ++ L P G S SAT +P+ + +
Sbjct: 590 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT----STPEELRGY 645
Query: 155 TAGPFDGS 162
+GP G+
Sbjct: 646 DSGPEGGA 653
Score = 30.8 bits (68), Expect = 2.2
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 9 ASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARP-----G 63
ASP + A S A P+ VPP+ S S P PP LAA P
Sbjct: 456 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 515
Query: 64 WAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGP 102
Q A ++ P PPA+ P A P A P P
Sbjct: 516 PPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 554
Score = 30.4 bits (67), Expect = 2.9
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 7 LAASPRQAAYADSGSFLHAPGAG------SPMFVPPARVPSMLSYLSGCEPSPQPPELAA 60
LA P QA A + L AP + SP+ P + P+ L+ P PP
Sbjct: 389 LATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 448
Query: 61 RPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGS 104
+ ++ A+ S S PP+ PP A P PS P S
Sbjct: 449 QAPFSPPASPPVSP----SATPPSQAPPSLAAPPLQVPPSPPAS 488
Score = 30.0 bits (66), Expect = 3.8
Identities = 36/122 (29%), Positives = 43/122 (35%), Gaps = 31/122 (25%)
Query: 28 AGSPMFVPPARVPSMLSYLSGCEPSPQPP------------------ELAARPGWAQTAT 69
AG+ P AR P +L+ P P PP LA R G AT
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 70 ADSSAFGPG-------SPHPPAAHPP----GATAFPFAHSPSGPGSGGSAGGRDGSAYQG 118
SA G S PA+ PP G A P ++ GP S S G G+ G
Sbjct: 70 IPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVS--SPGRASGTTRPG 127
Query: 119 AL 120
L
Sbjct: 128 PL 129
Score = 28.9 bits (63), Expect = 8.5
Identities = 43/183 (23%), Positives = 58/183 (31%), Gaps = 24/183 (13%)
Query: 4 SLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCE------PSPQPPE 57
+LALA P S L P + + Y SG E P P
Sbjct: 604 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 663
Query: 58 LAARPGWAQTATADSSAF--GPGSP--HPPAAHPPGATAFPFAHSPSGPGSG-------- 105
A P A AF PG+P PPA P A + GP S
Sbjct: 664 AACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALD 723
Query: 106 -----GSAGGRDGSAYQGALLPREQFAAPLGR-PVGTSYSATYPAYVSPDVAQSWTAGPF 159
G++GG+ + R A LG P+G ++ +S + + G
Sbjct: 724 PGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAA 783
Query: 160 DGS 162
GS
Sbjct: 784 GGS 786
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 44.3 bits (103), Expect = 2e-04
Identities = 50/172 (29%), Positives = 63/172 (36%), Gaps = 15/172 (8%)
Query: 6 ALAASPRQAAYADSGSFL----HAPGAG---SPMFVPPARVPSMLSY-LSGCEPSPQPPE 57
ALA P QA + SF +P A SP+ PP + P +L+ L PSP
Sbjct: 791 ALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 850
Query: 58 LAARPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQ 117
P T D+S GP A PP P + SPS SG G SA
Sbjct: 851 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP----PPSRSPSSTLSGPDLAGHSSSA-- 904
Query: 118 GALLPREQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGSVLHGLPG 169
P E G G + S A ++ +W+ GP G PG
Sbjct: 905 -TSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG 955
Score = 35.8 bits (81), Expect = 0.070
Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Query: 9 ASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTA 68
ASP + A S A P+ VPP+ S S P PP LAA P +
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPS 740
Query: 69 TADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGS 104
S P + PP PP A P PS P S
Sbjct: 741 PPASPPMSPSATPPPRV-PPLLAAPPLQVPPSPPAS 775
Score = 35.8 bits (81), Expect = 0.070
Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Query: 9 ASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTA 68
ASP + A P A P+ VPP+ S S P PP LAA P +
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 69 TADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGS 104
S P + PP A PP P PS P S
Sbjct: 772 PPASLPMSPLAKPPPQA-PPALATPPLQALPSPPAS 806
Score = 30.0 bits (66), Expect = 3.8
Identities = 36/122 (29%), Positives = 43/122 (35%), Gaps = 31/122 (25%)
Query: 28 AGSPMFVPPARVPSMLSYLSGCEPSPQPP------------------ELAARPGWAQTAT 69
AG+ P AR P +L+ P P PP LA R G AT
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 70 ADSSAFGPG-------SPHPPAAHPP----GATAFPFAHSPSGPGSGGSAGGRDGSAYQG 118
SA G S PA+ PP G A P ++ GP S S G G+ G
Sbjct: 70 IPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVS--SPGRASGTTRPG 127
Query: 119 AL 120
L
Sbjct: 128 PL 129
Score = 30.0 bits (66), Expect = 3.8
Identities = 49/197 (24%), Positives = 67/197 (34%), Gaps = 45/197 (22%)
Query: 7 LAASPRQAAYADSGSFLHAPGAGSPMFVPPARV----------PSMLSYLSGCEPSPQPP 56
LAA P Q + S +P A P VPP P+ L +P PQ P
Sbjct: 730 LAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAP 789
Query: 57 EL-------------AARPGWAQTATADSSAFGPGSPHPPAAH----------PPGATAF 93
A+ PG A + + S P + PP A PP A
Sbjct: 790 PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 849
Query: 94 PFAHSPSGPGSGGSAGGRDGSAYQGALL------PREQFAAPLGRP--VGTSYSATYPAY 145
P +P P + G G AL P ++ L P G S SAT
Sbjct: 850 PTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT---- 905
Query: 146 VSPDVAQSWTAGPFDGS 162
+P+ + + +GP G+
Sbjct: 906 STPEELRGYDSGPEGGA 922
Score = 28.9 bits (63), Expect = 8.5
Identities = 43/183 (23%), Positives = 58/183 (31%), Gaps = 24/183 (13%)
Query: 4 SLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCE------PSPQPPE 57
+LALA P S L P + + Y SG E P P
Sbjct: 873 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 932
Query: 58 LAARPGWAQTATADSSAF--GPGSP--HPPAAHPPGATAFPFAHSPSGPGSG-------- 105
A P A AF PG+P PPA P A + GP S
Sbjct: 933 AACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALD 992
Query: 106 -----GSAGGRDGSAYQGALLPREQFAAPLGR-PVGTSYSATYPAYVSPDVAQSWTAGPF 159
G++GG+ + R A LG P+G ++ +S + + G
Sbjct: 993 PGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAA 1052
Query: 160 DGS 162
GS
Sbjct: 1053 GGS 1055
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 44.3 bits (103), Expect = 2e-04
Identities = 50/172 (29%), Positives = 63/172 (36%), Gaps = 15/172 (8%)
Query: 6 ALAASPRQAAYADSGSFL----HAPGAG---SPMFVPPARVPSMLSY-LSGCEPSPQPPE 57
ALA P QA + SF +P A SP+ PP + P +L+ L PSP
Sbjct: 483 ALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 542
Query: 58 LAARPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQ 117
P T D+S GP A PP P + SPS SG G SA
Sbjct: 543 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP----PPSRSPSSTLSGPDLAGHSSSA-- 596
Query: 118 GALLPREQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGSVLHGLPG 169
P E G G + S A ++ +W+ GP G PG
Sbjct: 597 -TSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG 647
Score = 35.0 bits (79), Expect = 0.12
Identities = 30/88 (34%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 7 LAASPRQAAYADSGSFLHAPGAGSPM------FVPPARVPSMLSYLSGCEPSPQPPELAA 60
LA QA A + L AP + P F PPA P S PS PP LAA
Sbjct: 381 LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPS---ATPPSQAPPSLAA 437
Query: 61 RPGWAQTATADSSAFGPGSPHPPAAHPP 88
P + S P + PP A PP
Sbjct: 438 PPLQVPPSPPASPPMSPSATPPPQAPPP 465
Score = 31.6 bits (70), Expect = 1.3
Identities = 48/188 (25%), Positives = 66/188 (35%), Gaps = 38/188 (20%)
Query: 6 ALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPEL------- 58
+LAA P Q + S +P A P PP P L +P PQ P
Sbjct: 434 SLAAPPLQVPPSPPASPPMSPSATPPPQAPP---PLAAPPLQLAKPPPQAPPALATPPLQ 490
Query: 59 ------AARPGWAQTATADSSAFGPGSPHPPAAH----------PPGATAFPFAHSPSGP 102
A+ PG A + + S P + PP A PP A P +P P
Sbjct: 491 ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRP 550
Query: 103 GSGGSAGGRDGSAYQGALL------PREQFAAPLGRP--VGTSYSATYPAYVSPDVAQSW 154
+ G G AL P ++ L P G S SAT +P+ + +
Sbjct: 551 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT----STPEELRGY 606
Query: 155 TAGPFDGS 162
+GP G+
Sbjct: 607 DSGPEGGA 614
Score = 31.2 bits (69), Expect = 1.7
Identities = 34/113 (30%), Positives = 40/113 (35%), Gaps = 22/113 (19%)
Query: 28 AGSPMFVPPARVPSMLSYLSGCEPSPQPP------------------ELAARPGWAQTAT 69
AG+ P AR P +L+ P P PP LA R G AT
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 70 ADSSA--FGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGAL 120
SA GP P A G A P ++ GP S S G G+ G L
Sbjct: 70 IPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVS--SPGRASGTTRPGPL 120
Score = 30.8 bits (68), Expect = 2.2
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 9 ASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARP-----G 63
ASP + A S A P+ VPP+ S S P PP LAA P
Sbjct: 417 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 476
Query: 64 WAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGP 102
Q A ++ P PPA+ P A P A P P
Sbjct: 477 PPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 515
Score = 30.4 bits (67), Expect = 2.9
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 7 LAASPRQAAYADSGSFLHAPGAG------SPMFVPPARVPSMLSYLSGCEPSPQPPELAA 60
LA P QA A + L AP + SP+ P + P+ L+ P PP
Sbjct: 350 LATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 409
Query: 61 RPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGS 104
+ ++ A+ S S PP+ PP A P PS P S
Sbjct: 410 QAPFSPPASPPVSP----SATPPSQAPPSLAAPPLQVPPSPPAS 449
Score = 28.9 bits (63), Expect = 8.5
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 277 PRPLAMKKESIQTRKRKPKTIAKARGSSGSTRNASASPSAVASTDSSAATSKAKPSLASP 336
P P A ++ S ++P + + + ++ + A + PSA + + A S+ KP
Sbjct: 211 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 270
Query: 337 VCPGPSMAPQASGQEDDSLAPGHLEFKFEPEDFAFPSTAPSPQA 380
+ P PQ + D+ AP P PS PSP A
Sbjct: 271 LRP-----PQVTPPRKDA-APALGPLSSSPLATPSPSAPPSPSA 308
Score = 28.9 bits (63), Expect = 8.5
Identities = 43/183 (23%), Positives = 58/183 (31%), Gaps = 24/183 (13%)
Query: 4 SLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCE------PSPQPPE 57
+LALA P S L P + + Y SG E P P
Sbjct: 565 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 624
Query: 58 LAARPGWAQTATADSSAF--GPGSP--HPPAAHPPGATAFPFAHSPSGPGSG-------- 105
A P A AF PG+P PPA P A + GP S
Sbjct: 625 AACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALD 684
Query: 106 -----GSAGGRDGSAYQGALLPREQFAAPLGR-PVGTSYSATYPAYVSPDVAQSWTAGPF 159
G++GG+ + R A LG P+G ++ +S + + G
Sbjct: 685 PGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAA 744
Query: 160 DGS 162
GS
Sbjct: 745 GGS 747
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 44.3 bits (103), Expect = 2e-04
Identities = 97/400 (24%), Positives = 140/400 (35%), Gaps = 69/400 (17%)
Query: 4 SLALAASPRQAAYADS---GSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAA 60
SL+ AA+P A S G AG+P P+ + G +P +P A+
Sbjct: 241 SLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGAS 300
Query: 61 RPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGAL 120
PG GP P PAA P A P A +P+ ++ ++ AL
Sbjct: 301 TPG------------GPAEPSAPAA--PSAAPAPAAPAPAPAPQSAASSQPQSASTPPAL 346
Query: 121 LPREQF-AAP-LGRPVGTSYSATYPAYVSPDVAQSWTAG---PFDGSVLH--GLPGRRPT 173
P AAP L P+ SA+ + +P V+ + TA P + H G P
Sbjct: 347 APGSLLGAAPGLPSPLLPQTSASGVIFPNPLVSIAATANALDPLSALMKHRKGKPPNVSV 406
Query: 174 FVSDFLEEFPGEGRECVNC-------GALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPL 226
F E P +C C AL L G + CN CG G +
Sbjct: 407 FEPKASAEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVH 466
Query: 227 VRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKES 286
+ K + N + L + P C+ G+P +++ E
Sbjct: 467 FQRHKEKYPHIQ-----MNPYPVPEYL-----DNVPTCS---------GIPYGMSLPPEK 507
Query: 287 IQTRKRKPKTIAKARGSSGSTRNASASPSAVASTDSSAATSKAKPSLASPVCPGPSMAPQ 346
T K + +S + P A DS +AT P+ SP P P
Sbjct: 508 PVTTWLDSKPVLPTVPTSVGLQLPPTVPGAHGYADSPSAT----PASRSPQRPSP----- 558
Query: 347 ASGQEDDSLAPG--HLEFKFEPEDFAFPSTAPSPQAGLRG 384
+ E SL+PG H+E +TA SPQ+ L G
Sbjct: 559 -ASSECASLSPGLNHVE-------SGVSATAESPQSLLGG 590
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 42.7 bits (99), Expect = 6e-04
Identities = 45/143 (31%), Positives = 56/143 (39%), Gaps = 24/143 (16%)
Query: 26 PGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPGSP---HP 82
P AGSP+ P R+PS S QP AA P Q + A GPG+P P
Sbjct: 498 PPAGSPL---PQRLPSPTS------APQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP 548
Query: 83 PA-------AHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGALLPREQFAAPLGRPVG 135
PA A PP AT P+ P + G+ G G QG P ++ P G
Sbjct: 549 PASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPG--GQQRQG---PPQKPPGPAGPTRQ 603
Query: 136 TSYSATYPAYVSPDVAQSWTAGP 158
S + P P Q +GP
Sbjct: 604 ASQAGPVPRTGPPTTQQPRPSGP 626
Score = 32.3 bits (72), Expect = 0.77
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 12/53 (22%)
Query: 80 PHPPAAHPPGATAFPF------------AHSPSGPGSGGSAGGRDGSAYQGAL 120
P PP AH PGAT P A SP+ P G S GG S+ A+
Sbjct: 32 PPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGGGGFFSSLSNAV 84
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 42.7 bits (99), Expect = 6e-04
Identities = 45/143 (31%), Positives = 56/143 (39%), Gaps = 24/143 (16%)
Query: 26 PGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPGSP---HP 82
P AGSP+ P R+PS S QP AA P Q + A GPG+P P
Sbjct: 498 PPAGSPL---PQRLPSPTS------APQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP 548
Query: 83 PA-------AHPPGATAFPFAHSPSGPGSGGSAGGRDGSAYQGALLPREQFAAPLGRPVG 135
PA A PP AT P+ P + G+ G G QG P ++ P G
Sbjct: 549 PASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPG--GQQRQG---PPQKPPGPAGPTRQ 603
Query: 136 TSYSATYPAYVSPDVAQSWTAGP 158
S + P P Q +GP
Sbjct: 604 ASQAGPVPRTGPPTTQQPRPSGP 626
Score = 32.3 bits (72), Expect = 0.77
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 12/53 (22%)
Query: 80 PHPPAAHPPGATAFPF------------AHSPSGPGSGGSAGGRDGSAYQGAL 120
P PP AH PGAT P A SP+ P G S GG S+ A+
Sbjct: 32 PPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGGGGFFSSLSNAV 84
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 42.7 bits (99), Expect = 6e-04
Identities = 45/139 (32%), Positives = 55/139 (39%), Gaps = 20/139 (14%)
Query: 12 RQAAYADSGSFLHAPGAGSPMFV----------PPARVPSMLSYLSGCEPSPQPPELAAR 61
R A S S P G+P PP P LS +SG PSP+PP L
Sbjct: 753 RSALVRTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSG--PSPEPPPLDES 810
Query: 62 PGWAQTATAD-----SSAFGPGS-PHPPAAHPPGATAFPFAHSPSG-PGSGGSAGGRDGS 114
PG + AT S GP P PPA P + P G P S GS+G
Sbjct: 811 PGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPF 870
Query: 115 AYQGALLPREQFAAPLGRP 133
A +G L +++ P G P
Sbjct: 871 AEEGNLTIKQR-PKPAGPP 888
Score = 29.3 bits (64), Expect = 6.5
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 31/109 (28%)
Query: 25 APGAGSPMFVPPARVPSMLSY-----------------LSGCEPSP-----------QPP 56
A G P+ +PPAR PS S SG +PSP +PP
Sbjct: 599 AGGGPEPLPLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNLPEGTERPP 658
Query: 57 ELAAR-PGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGS 104
+L + PG Q + GSP PA PP + F++ P +
Sbjct: 659 KLCSSLPG--QGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPAT 705
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 42.7 bits (99), Expect = 6e-04
Identities = 45/139 (32%), Positives = 55/139 (39%), Gaps = 20/139 (14%)
Query: 12 RQAAYADSGSFLHAPGAGSPMFV----------PPARVPSMLSYLSGCEPSPQPPELAAR 61
R A S S P G+P PP P LS +SG PSP+PP L
Sbjct: 835 RSALVRTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSG--PSPEPPPLDES 892
Query: 62 PGWAQTATAD-----SSAFGPGS-PHPPAAHPPGATAFPFAHSPSG-PGSGGSAGGRDGS 114
PG + AT S GP P PPA P + P G P S GS+G
Sbjct: 893 PGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPF 952
Query: 115 AYQGALLPREQFAAPLGRP 133
A +G L +++ P G P
Sbjct: 953 AEEGNLTIKQR-PKPAGPP 970
Score = 29.3 bits (64), Expect = 6.5
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 31/109 (28%)
Query: 25 APGAGSPMFVPPARVPSMLSY-----------------LSGCEPSP-----------QPP 56
A G P+ +PPAR PS S SG +PSP +PP
Sbjct: 681 AGGGPEPLPLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNLPEGTERPP 740
Query: 57 ELAAR-PGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGS 104
+L + PG Q + GSP PA PP + F++ P +
Sbjct: 741 KLCSSLPG--QGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPAT 787
>gi|121114296 caudal type homeobox 1 [Homo sapiens]
Length = 265
Score = 42.0 bits (97), Expect = 0.001
Identities = 39/125 (31%), Positives = 47/125 (37%), Gaps = 18/125 (14%)
Query: 10 SPRQAAYADSGSFLHAPGAGSPMFVPPA--RVPSMLSYLSGCEPSPQPPEL------AAR 61
SP A S P A P PPA + P SY S EP+P PP A +
Sbjct: 11 SPVYPGPARPASLGLGPQAYGPPAPPPAPPQYPDFSSY-SHVEPAPAPPTAWGAPFPAPK 69
Query: 62 PGWAQT---------ATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGGSAGGRD 112
WA A+ S AFGP P PPG A GPG+ S G +
Sbjct: 70 DDWAAAYGPGPAAPAASPASLAFGPPPDFSPVPAPPGPGPGLLAQPLGGPGTPSSPGAQR 129
Query: 113 GSAYQ 117
+ Y+
Sbjct: 130 PTPYE 134
Score = 30.0 bits (66), Expect = 3.8
Identities = 31/123 (25%), Positives = 41/123 (33%), Gaps = 28/123 (22%)
Query: 8 AASPRQAAYADSGSFLHAPGA-------GSPMFVP--------------PARVPSMLSYL 46
A P Y D S+ H A G+P P PA P+ L++
Sbjct: 34 APPPAPPQYPDFSSYSHVEPAPAPPTAWGAPFPAPKDDWAAAYGPGPAAPAASPASLAFG 93
Query: 47 SGCEPSPQPPELAARPGWAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHSPSGPGSGG 106
+ SP P PG GPG+P P A P T + + G GG
Sbjct: 94 PPPDFSPVPAPPGPGPGLLAQPLG-----GPGTPSSPGAQRP--TPYEWMRRSVAAGGGG 146
Query: 107 SAG 109
+G
Sbjct: 147 GSG 149
>gi|64084766 fidgetin [Homo sapiens]
Length = 759
Score = 40.8 bits (94), Expect = 0.002
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 4 SLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGC--EPSPQPPELAAR 61
SL ++ A +GS+LH+ + P P+ PS L + SG P P PP A
Sbjct: 175 SLHAGLPSQEYAPGYNGSYLHSTYSSQPAPALPSPHPSPL-HSSGLLQPPPPPPPPPALV 233
Query: 62 PGWAQTATADSSAFGPGSPHPPAA------HPPGATAFPFAHSPSG 101
PG+ T+ S ++ P + +PP P GA P A+ PSG
Sbjct: 234 PGYNGTSNLSSYSY-PSASYPPQTAVGSGYSPGGAPPPPSAYLPSG 278
Score = 28.9 bits (63), Expect = 8.5
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 8/104 (7%)
Query: 281 AMKKESIQTRKRKPKTIAKARGSSGSTRNASASPSAVASTDSSAATSKAKPSLASPVCPG 340
++ E++ P I ++ S A SA + A++ +PS +S C
Sbjct: 112 SLNSEAVYPMNCVPDVITASKAGVSSAL-PPADVSASIGSSPGVASNLTEPSYSSSTCGS 170
Query: 341 PSMAPQASGQEDDSLAPG------HLEFKFEPEDFAFPSTAPSP 378
++ +G APG H + +P A PS PSP
Sbjct: 171 HTVPSLHAGLPSQEYAPGYNGSYLHSTYSSQPAP-ALPSPHPSP 213
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 40.8 bits (94), Expect = 0.002
Identities = 55/216 (25%), Positives = 73/216 (33%), Gaps = 35/216 (16%)
Query: 8 AASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQT 67
++SP++A + + A + PPA P PSP+ P WA T
Sbjct: 915 SSSPKKARATPAPKGIPASPSPKGAPTPPAATP----------PSPKGGPATPSPKWAPT 964
Query: 68 ---ATADSSAFGP------GSPHPPAAHPP------------GATAFPFAHSPSGPGSGG 106
AT S GP G+P PPAA PP GA P PS GS
Sbjct: 965 PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 107 SAGGRDGSAYQGALLP----REQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGS 162
+ G++ A P A PL + T+ +AT P+ S P +
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPA 1084
Query: 163 VLHGLPGRRPTFVSDFLEEFPGEGRECVNCGALSTP 198
P P S P G L+TP
Sbjct: 1085 ATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATP 1120
Score = 30.8 bits (68), Expect = 2.2
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 51 PSPQPPELAARPGWAQTATADSSAFGP---GSPHPPAAHPPGATAFPF--AHSPSGPGSG 105
P+ PP+ A P A + S P G+P PPA PP P A +PS G
Sbjct: 1301 PATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Query: 106 GSAGGRDG 113
+ ++G
Sbjct: 1361 TTPSSKEG 1368
Score = 30.0 bits (66), Expect = 3.8
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 15/82 (18%)
Query: 26 PGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGP------GS 79
P G+P PPA P L P P A T S GP G+
Sbjct: 1259 PPKGAP--TPPAATPPSLKGGLATPPHKGAPNPAV-------VTPPSPKGGPATSPPKGA 1309
Query: 80 PHPPAAHPPGATAFPFAHSPSG 101
P PPAA PP P P G
Sbjct: 1310 PTPPAATPPSPKGSPGTPPPKG 1331
Score = 29.6 bits (65), Expect = 5.0
Identities = 38/148 (25%), Positives = 50/148 (33%), Gaps = 17/148 (11%)
Query: 11 PRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATA 70
P + G P G+P P A PS L+ P P AA P + A
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPT-TPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA 1164
Query: 71 DSSAFGPGSPHPPAAHPP------------GATAFPFAHSPSGPGSGGSAGGRDGSAYQG 118
G+P PAA PP GA P A PS G + +
Sbjct: 1165 TPPP--KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1222
Query: 119 AL--LPREQFAAPLGRPVGTSYSATYPA 144
A P+ A P + T+ +AT P+
Sbjct: 1223 ATPPSPKGGLATPSPKGAPTTPAATPPS 1250
Score = 28.9 bits (63), Expect = 8.5
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 29 GSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPGSPHPPAAHPP 88
G+P P A PS L+ P P AA P + A S G+P PAA PP
Sbjct: 1193 GAPT-TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP--KGAPTTPAATPP 1249
Query: 89 GATAFPFAHSPSG 101
P P G
Sbjct: 1250 SPKGGPATPPPKG 1262
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,361,768
Number of Sequences: 37866
Number of extensions: 1286287
Number of successful extensions: 9841
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 754
Number of HSP's that attempted gapping in prelim test: 7757
Number of HSP's gapped (non-prelim): 2561
length of query: 397
length of database: 18,247,518
effective HSP length: 104
effective length of query: 293
effective length of database: 14,309,454
effective search space: 4192670022
effective search space used: 4192670022
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.