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Search of human proteins with 17738294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4
[Homo sapiens]
(173 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4 [Homo... 363 e-101
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239748304 PREDICTED: hypothetical protein XP_002346608 [Homo ... 40 0.001
gi|119220552 sidekick 1 [Homo sapiens] 37 0.009
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|126352608 elastin isoform e precursor [Homo sapiens] 37 0.011
gi|126352446 elastin isoform d precursor [Homo sapiens] 37 0.011
gi|126352322 elastin isoform c precursor [Homo sapiens] 37 0.011
gi|126352440 elastin isoform a precursor [Homo sapiens] 37 0.011
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 37 0.011
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 37 0.011
gi|239742202 PREDICTED: hypothetical protein XP_002342450 [Homo ... 37 0.011
gi|239748281 PREDICTED: hypothetical protein [Homo sapiens] 36 0.015
gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo ... 36 0.015
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens] 36 0.019
gi|239750468 PREDICTED: similar to Os05g0242100 [Homo sapiens] 36 0.019
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ... 36 0.019
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ... 36 0.019
gi|12751477 forkhead box L2 [Homo sapiens] 35 0.032
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 35 0.032
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 35 0.042
gi|169166645 PREDICTED: hypothetical protein [Homo sapiens] 35 0.042
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 35 0.042
gi|113416055 PREDICTED: hypothetical protein [Homo sapiens] 35 0.042
gi|113415539 PREDICTED: hypothetical protein [Homo sapiens] 35 0.042
gi|4503119 cancer/testis antigen 1B [Homo sapiens] 34 0.055
gi|239754772 PREDICTED: hypothetical protein [Homo sapiens] 34 0.055
gi|239749310 PREDICTED: hypothetical protein XP_002346992 [Homo ... 34 0.055
gi|239743404 PREDICTED: hypothetical protein XP_002342840 [Homo ... 34 0.055
>gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4 [Homo
sapiens]
Length = 173
Score = 363 bits (931), Expect = e-101
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MGRGRCVGPSLQLRGQEWRCSPLVPKGGAAAAELGPGGGENMVRRFLVTLRIRRACGPPR 60
MGRGRCVGPSLQLRGQEWRCSPLVPKGGAAAAELGPGGGENMVRRFLVTLRIRRACGPPR
Sbjct: 1 MGRGRCVGPSLQLRGQEWRCSPLVPKGGAAAAELGPGGGENMVRRFLVTLRIRRACGPPR 60
Query: 61 VRVFVVHIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAA 120
VRVFVVHIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAA
Sbjct: 61 VRVFVVHIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAA 120
Query: 121 PRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGRARCLGPSARGPG 173
PRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGRARCLGPSARGPG
Sbjct: 121 PRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGRARCLGPSARGPG 173
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 40.0 bits (92), Expect = 0.001
Identities = 41/132 (31%), Positives = 50/132 (37%), Gaps = 35/132 (26%)
Query: 74 EWAAPGAPAAVALVLMLLRSQ---RLGQQPLPRRPGH-------DDGQR--PSGGA---- 117
+W P+ V M+ R+ + G P+P R GH DGQ P+G
Sbjct: 10 QWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWR 69
Query: 118 ---------AAAPRRGAQLRR--------PRHSHPT--RARRCPGGLPGHAGGAAPGRGA 158
AAA R A RR P+ P R P G+PG G AP RG
Sbjct: 70 GGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGG 129
Query: 159 AGRARCLGPSAR 170
A RAR L R
Sbjct: 130 AARARLLAVEVR 141
Score = 32.7 bits (73), Expect = 0.16
Identities = 42/147 (28%), Positives = 51/147 (34%), Gaps = 13/147 (8%)
Query: 25 PKGGAAAAELGPGGGENMVRRFLVTLRIRRACGPPRVRVFVVHIPRLTGEWAAPGAPAAV 84
P+ LGPGG LV G P R + P G A V
Sbjct: 83 PRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLA--PARGGAARARLLAVEV 140
Query: 85 ALVLMLLRSQRLGQQ---PLPRRPGH--DDGQRPSGGAAAAPRRGAQLRRPRHSHPTR-- 137
+ + R + +G P PR+ D G R + A P GA+ RPR P
Sbjct: 141 RVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPP 200
Query: 138 ---ARRCPGGLPGHAGGAAPGRGAAGR 161
A R P H GG PGRG R
Sbjct: 201 PRPAPRRRSTAPRHEGG-RPGRGRTRR 226
>gi|239748304 PREDICTED: hypothetical protein XP_002346608 [Homo
sapiens]
Length = 285
Score = 40.0 bits (92), Expect = 0.001
Identities = 41/132 (31%), Positives = 50/132 (37%), Gaps = 35/132 (26%)
Query: 74 EWAAPGAPAAVALVLMLLRSQ---RLGQQPLPRRPGH-------DDGQR--PSGGA---- 117
+W P+ V M+ R+ + G P+P R GH DGQ P+G
Sbjct: 10 QWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWR 69
Query: 118 ---------AAAPRRGAQLRR--------PRHSHPT--RARRCPGGLPGHAGGAAPGRGA 158
AAA R A RR P+ P R P G+PG G AP RG
Sbjct: 70 GGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGG 129
Query: 159 AGRARCLGPSAR 170
A RAR L R
Sbjct: 130 AARARLLAVEVR 141
>gi|119220552 sidekick 1 [Homo sapiens]
Length = 2213
Score = 37.0 bits (84), Expect = 0.009
Identities = 31/79 (39%), Positives = 32/79 (40%), Gaps = 17/79 (21%)
Query: 110 GQRPS----GGAAAAPRRGAQLRRPRHSHPTRARRC-----------PGGLPGHAGGAAP 154
G RPS GG A P A RPR S P RAR P P +GG
Sbjct: 4 GARPSAAGGGGGGAEPPERAGPGRPRGSPPGRARPSLAPRPGPEPSRPRAAPETSGGDTA 63
Query: 155 GRGAAG--RARCLGPSARG 171
G G G RA LGP RG
Sbjct: 64 GAGRCGGRRAAKLGPGRRG 82
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.0 bits (84), Expect = 0.009
Identities = 48/165 (29%), Positives = 56/165 (33%), Gaps = 27/165 (16%)
Query: 29 AAAAELGPGGGENMVRRFLVTLRIRRACGPPRVRVFVVHIPRLTGEWAAP--------GA 80
AAA G GG E R A PP R+ + L A G+
Sbjct: 235 AAAGSRGRGGAERPAAR-------GSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGS 287
Query: 81 PAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRR--------GAQLRRPRH 132
+ L L S+ P PRR + P+G PR GA+ RR
Sbjct: 288 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGE 347
Query: 133 SHPTRARR---CPGGLPGHAGGAAPGRGAAGR-ARCLGPSARGPG 173
R RR G P AG AAPGR R AR GPG
Sbjct: 348 ERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPG 392
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.0 bits (84), Expect = 0.009
Identities = 48/165 (29%), Positives = 56/165 (33%), Gaps = 27/165 (16%)
Query: 29 AAAAELGPGGGENMVRRFLVTLRIRRACGPPRVRVFVVHIPRLTGEWAAP--------GA 80
AAA G GG E R A PP R+ + L A G+
Sbjct: 235 AAAGSRGRGGAERPAAR-------GSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGS 287
Query: 81 PAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRR--------GAQLRRPRH 132
+ L L S+ P PRR + P+G PR GA+ RR
Sbjct: 288 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGE 347
Query: 133 SHPTRARR---CPGGLPGHAGGAAPGRGAAGR-ARCLGPSARGPG 173
R RR G P AG AAPGR R AR GPG
Sbjct: 348 ERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPG 392
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 36.6 bits (83), Expect = 0.011
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 114 SGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAA--PGRGAAGRARCLGPSARG 171
+G AAAPR G L HP+R PG +PG G PG G LG A G
Sbjct: 2 AGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLG----ALGGGALG 57
Query: 172 PG 173
PG
Sbjct: 58 PG 59
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 36.6 bits (83), Expect = 0.011
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 114 SGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAA--PGRGAAGRARCLGPSARG 171
+G AAAPR G L HP+R PG +PG G PG G LG A G
Sbjct: 2 AGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLG----ALGGGALG 57
Query: 172 PG 173
PG
Sbjct: 58 PG 59
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 36.6 bits (83), Expect = 0.011
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 114 SGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAA--PGRGAAGRARCLGPSARG 171
+G AAAPR G L HP+R PG +PG G PG G LG A G
Sbjct: 2 AGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLG----ALGGGALG 57
Query: 172 PG 173
PG
Sbjct: 58 PG 59
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 36.6 bits (83), Expect = 0.011
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 114 SGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAA--PGRGAAGRARCLGPSARG 171
+G AAAPR G L HP+R PG +PG G PG G LG A G
Sbjct: 2 AGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLG----ALGGGALG 57
Query: 172 PG 173
PG
Sbjct: 58 PG 59
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 36.6 bits (83), Expect = 0.011
Identities = 38/115 (33%), Positives = 43/115 (37%), Gaps = 11/115 (9%)
Query: 55 ACGPPRVRVFVVHIPRLTGEWA----APGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDG 110
A PP + P EW A GA A +L L S+RLG+ PL R
Sbjct: 40 ARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFR------ 93
Query: 111 QRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGRARCL 165
+ G A APR R RA G P A AAP R ARCL
Sbjct: 94 EASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPR-QRSLARCL 147
Score = 33.1 bits (74), Expect = 0.12
Identities = 34/107 (31%), Positives = 40/107 (37%), Gaps = 12/107 (11%)
Query: 79 GAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRR--------GAQLRRP 130
G+ + L L S+ P PRR + P+G PR GA+ RR
Sbjct: 192 GSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRG 251
Query: 131 RHSHPTRARR---CPGGLPGHAGGAAPGRGAAGR-ARCLGPSARGPG 173
R RR G P AG AAPGR R AR GPG
Sbjct: 252 GEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPG 298
Score = 30.0 bits (66), Expect = 1.0
Identities = 38/120 (31%), Positives = 43/120 (35%), Gaps = 37/120 (30%)
Query: 77 APGAPAAVALVLMLLRSQRLGQQPLPRR--PGHDDGQRPSGGAAAAPRRGAQLRR--PR- 131
APGAP A G++P PRR G+RP+ A AAP R L R PR
Sbjct: 100 APGAPRARG---------SCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRS 150
Query: 132 --------------HSHPTRARRC---------PGGLPGHAGGAAPGRGAAGRARCLGPS 168
H R RC P L G A+P R AA A PS
Sbjct: 151 VGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS 210
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 36.6 bits (83), Expect = 0.011
Identities = 40/114 (35%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 76 AAPGAPAAVALVLMLLRSQRLG------QQPLPRRPGHDDGQRPSGGAAAAP-RRGAQLR 128
AAPGA + R ++G + L RR + G+ P GG +P RGA
Sbjct: 84 AAPGAAPRPRRQRLRRRRAKVGGWGCARARGLDRRAPGEGGRSPGGGLEPSPGARGAVGA 143
Query: 129 RP---RHSHPT-RARRCPGG--------LPG--HAGGAAPGRGAAGRARCLGPS 168
P RH P R+RR P LPG AGGA GRG GR G S
Sbjct: 144 APAAARHRKPRGRSRRAPQMPLRVLPPILPGLSRAGGATGGRGLPGRRGLPGRS 197
>gi|239742202 PREDICTED: hypothetical protein XP_002342450 [Homo
sapiens]
Length = 272
Score = 36.6 bits (83), Expect = 0.011
Identities = 36/106 (33%), Positives = 40/106 (37%), Gaps = 32/106 (30%)
Query: 97 GQQPLPRRPGH-------DDGQR--PSGGA-------------AAAPRRGAQLRR----- 129
G P+P R GH DGQ P+G AAA R A RR
Sbjct: 23 GIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPG 82
Query: 130 ---PRHSHPT--RARRCPGGLPGHAGGAAPGRGAAGRARCLGPSAR 170
P+ P R P G+PG G AP RG A RAR L R
Sbjct: 83 GRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARLLAVEVR 128
Score = 31.6 bits (70), Expect = 0.36
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 131 RHSHPTRA-RRCPGGLPGHAGGAAPGRGAAGRARCLGPSARGP 172
+H P A RR GGL G AA +A R R LGP RGP
Sbjct: 44 QHVDPAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGP 86
>gi|239748281 PREDICTED: hypothetical protein [Homo sapiens]
Length = 242
Score = 36.2 bits (82), Expect = 0.015
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 90 LLRSQRLGQQPLPRRPGHDDGQRPS----GGAAAAPRRGAQLRRPRHSHPTRARRCPGGL 145
+LR R+ P PR H Q+ GG A AP G R+P + RR G
Sbjct: 117 ILRLPRVVGVPGPRGRRHRGEQQQQREQRGGGARAPGPGPGSRQPLPAG-LHGRRKVGSA 175
Query: 146 PGHAGGAAPGRGAAGRARCLGPSARGPG 173
P G A GA G +GPS PG
Sbjct: 176 PDRHGLGAGSAGARGNKAVVGPSPPPPG 203
>gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo
sapiens]
Length = 242
Score = 36.2 bits (82), Expect = 0.015
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 90 LLRSQRLGQQPLPRRPGHDDGQRPS----GGAAAAPRRGAQLRRPRHSHPTRARRCPGGL 145
+LR R+ P PR H Q+ GG A AP G R+P + RR G
Sbjct: 117 ILRLPRVVGVPGPRGRRHRGEQQQQREQRGGGARAPGPGPGSRQPLPAG-LHGRRKVGSA 175
Query: 146 PGHAGGAAPGRGAAGRARCLGPSARGPG 173
P G A GA G +GPS PG
Sbjct: 176 PDRHGLGAGSAGARGNKAVVGPSPPPPG 203
>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 35.8 bits (81), Expect = 0.019
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 27/113 (23%)
Query: 69 PRLTGEWAAPGAPAAVALVLMLLRSQRLGQQP---LPRRPGH--------DDGQRPSGGA 117
PR+ G +PG VAL + R G+Q P RPG Q + G
Sbjct: 45 PRVFGLSRSPGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR 104
Query: 118 AAAPRRGA-------------QLRRPRHSHPTRARRCPGGLPGHAGGAAPGRG 157
A RRG +LRRPRH P +RR P PG APG+G
Sbjct: 105 AQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPA--PG-PRAPAPGKG 154
>gi|239750468 PREDICTED: similar to Os05g0242100 [Homo sapiens]
Length = 758
Score = 35.8 bits (81), Expect = 0.019
Identities = 39/118 (33%), Positives = 45/118 (38%), Gaps = 34/118 (28%)
Query: 76 AAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQLRRPRHSHP 135
A P APAA + L +QP+ R G G S G+A RRG + R RH
Sbjct: 20 ATPSAPAA---------QRALAEQPMSARLGPTRG---SQGSAPGRRRGRRQR--RHRRG 65
Query: 136 TRARRCP----GGLPGHAGGA----------------APGRGAAGRARCLGPSARGPG 173
RARR G HAG A APG+ A R G GPG
Sbjct: 66 LRARRPQRHGGSGTAAHAGAARQVASGFMPHRRRRRTAPGQPWASGFRRQGRGLSGPG 123
>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
Length = 296
Score = 35.8 bits (81), Expect = 0.019
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 27/113 (23%)
Query: 69 PRLTGEWAAPGAPAAVALVLMLLRSQRLGQQP---LPRRPGH--------DDGQRPSGGA 117
PR+ G +PG VAL + R G+Q P RPG Q + G
Sbjct: 45 PRVFGLSRSPGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR 104
Query: 118 AAAPRRGA-------------QLRRPRHSHPTRARRCPGGLPGHAGGAAPGRG 157
A RRG +LRRPRH P +RR P PG APG+G
Sbjct: 105 AQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPA--PG-PRAPAPGKG 154
>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
sapiens]
Length = 296
Score = 35.8 bits (81), Expect = 0.019
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 27/113 (23%)
Query: 69 PRLTGEWAAPGAPAAVALVLMLLRSQRLGQQP---LPRRPGH--------DDGQRPSGGA 117
PR+ G +PG VAL + R G+Q P RPG Q + G
Sbjct: 45 PRVFGLSRSPGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR 104
Query: 118 AAAPRRGA-------------QLRRPRHSHPTRARRCPGGLPGHAGGAAPGRG 157
A RRG +LRRPRH P +RR P PG APG+G
Sbjct: 105 AQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPA--PG-PRAPAPGKG 154
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 35.0 bits (79), Expect = 0.032
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 76 AAPGAPAAVALVLMLLRSQ-------RLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQLR 128
A PG+P A A+V L R+ LP PG + GG AAP
Sbjct: 234 AGPGSPGAAAVVKGLAGPAASYGPYTRVQSMALP--PGVVNSYNGLGGPPAAPPPPPHPH 291
Query: 129 RPRHSHPTRARRCPGGLPGHAGGAAPGRG 157
H+H A P P H G AAP G
Sbjct: 292 PHPHAHHLHAAAAPPPAPPHHGAAAPPPG 320
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 35.0 bits (79), Expect = 0.032
Identities = 37/115 (32%), Positives = 41/115 (35%), Gaps = 41/115 (35%)
Query: 100 PLPRRPGHDDGQRPSG-GAAAAPRRGAQLRRPRHSHP------------TRARRCPGGLP 146
P PRRP + P G+ P R RPR HP TR R PGG P
Sbjct: 51 PGPRRPAPLPARPPGALGSVLRPLRARPGCRPRRPHPAARCLPLRPHRPTRRHRRPGGFP 110
Query: 147 --------------------GHAGGAAPG-------RGAAGRARCLGP-SARGPG 173
AGGAAPG G+ GR+ GP S RG G
Sbjct: 111 LAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGGRSHPGGPGSPRGGG 165
Score = 33.1 bits (74), Expect = 0.12
Identities = 49/178 (27%), Positives = 55/178 (30%), Gaps = 47/178 (26%)
Query: 12 QLRGQEWRCSPLVPKGGAAAAELGPGGGE---------NMVRRFLVTLRIRRACGP---- 58
Q+ G R P P G A GPG + L LR R C P
Sbjct: 27 QICGPRERHGPRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGCRPRRPH 86
Query: 59 PRVRVFVVHIPRLTGEWAAPGA-PAAVALVLMLLRSQRLGQQPLPR-RPGHDDGQRPSGG 116
P R + R T PG P A QP PR PG +GG
Sbjct: 87 PAARCLPLRPHRPTRRHRRPGGFPLAWG-----------SPQPAPRPAPGRSSALALAGG 135
Query: 117 AAAAPRRGAQLRRPRHSHPTRARRCPGGLPG--HAGGAAPGRGAAGRARCLGPSARGP 172
AA R + PGG G H GG RG +GP RGP
Sbjct: 136 AAPGVARAQR---------------PGGSGGRSHPGGPGSPRGGG----TVGPGDRGP 174
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 34.7 bits (78), Expect = 0.042
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 82 AAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGG----AAAAPRRGAQLRRPRHSHP-T 136
AAV V + +R G++P ++ + GG A RRG ++PR +P
Sbjct: 350 AAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRR 409
Query: 137 RARRCPGGLPGHAGGAAPGRGAAGRARCLGPSARGPG 173
RA++ P P G P R A+ G +R G
Sbjct: 410 RAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGG 446
Score = 30.0 bits (66), Expect = 1.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 103 RRPGHDDGQRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAP---GRGAA 159
++P + +R + A AA RG ++PR P +A + GG GG P G+ A
Sbjct: 400 KKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGP-KAAKSRGGKSRSGGGKKPRRRGQKAR 458
Query: 160 GRARCLGPSARG 171
+A G +RG
Sbjct: 459 QKAAEAGAESRG 470
>gi|169166645 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 34.7 bits (78), Expect = 0.042
Identities = 49/157 (31%), Positives = 58/157 (36%), Gaps = 23/157 (14%)
Query: 8 GPSLQLRGQEWRCS-PLVPKGGAAAAELGPGG------GENMVRRFLVTLRIRRACGPPR 60
GP+ R E P KG AA ++L G G +R VT RA
Sbjct: 103 GPAAMARRSEKAAGRPRAAKGLAAWSDLVAGAVVQAVPGSRRSQRAHVTAPALRAWRAAG 162
Query: 61 VRVFVVHIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRP---SGGA 117
R +P T A PG P +L + L RS R Q + P H QR GA
Sbjct: 163 CRKTPSSLPSFTTT-APPGKPLPTSLQV-LSRSSR-AQSAIDTFPHHLPAQREPEKEAGA 219
Query: 118 AAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAP 154
A PR + P R R LP A GAAP
Sbjct: 220 GALPR----------TTPGRTRELERNLPQVAAGAAP 246
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 34.7 bits (78), Expect = 0.042
Identities = 48/156 (30%), Positives = 52/156 (33%), Gaps = 31/156 (19%)
Query: 7 VGPSLQLRGQEWRCSPLVPKGGAAAAELGPGGGENMVRRFLVTLRIRRACGPPRVRVFVV 66
V P+ +LR PL + A AA GPGG R V R A GP
Sbjct: 87 VRPAARLRAPARDPVPLAGRQRAGAAPRGPGGP---ARTPAVRAGRRAADGPGE------ 137
Query: 67 HIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQ 126
E APG R L Q PR P RP G A GA
Sbjct: 138 -------EAPAPGRA----------RFSGLSQ---PRGPQPRAAVRPRRGGALPRGTGAV 177
Query: 127 LRRPRHSHPTRARRCPG--GLPGHAGGAAPGRGAAG 160
R + P R RRC GL G G G A G
Sbjct: 178 PERGPGTEPQRGRRCSDLQGLGGRLRGCPAGPSARG 213
>gi|113416055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 34.7 bits (78), Expect = 0.042
Identities = 49/157 (31%), Positives = 58/157 (36%), Gaps = 23/157 (14%)
Query: 8 GPSLQLRGQEWRCS-PLVPKGGAAAAELGPGG------GENMVRRFLVTLRIRRACGPPR 60
GP+ R E P KG AA ++L G G +R VT RA
Sbjct: 103 GPAAMARRSEKAAGRPRAAKGLAAWSDLVAGAVVQAVPGSRRSQRAHVTAPALRAWRAAG 162
Query: 61 VRVFVVHIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRP---SGGA 117
R +P T A PG P +L + L RS R Q + P H QR GA
Sbjct: 163 CRKTPSSLPSFTTT-APPGKPLPTSLQV-LSRSSR-AQSAIDTFPHHLPAQREPEKEAGA 219
Query: 118 AAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAP 154
A PR + P R R LP A GAAP
Sbjct: 220 GALPR----------TTPGRTRELERNLPQVAAGAAP 246
>gi|113415539 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 34.7 bits (78), Expect = 0.042
Identities = 49/157 (31%), Positives = 58/157 (36%), Gaps = 23/157 (14%)
Query: 8 GPSLQLRGQEWRCS-PLVPKGGAAAAELGPGG------GENMVRRFLVTLRIRRACGPPR 60
GP+ R E P KG AA ++L G G +R VT RA
Sbjct: 103 GPAAMARRSEKAAGRPRAAKGLAAWSDLVAGAVVQAVPGSRRSQRAHVTAPALRAWRAAG 162
Query: 61 VRVFVVHIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRP---SGGA 117
R +P T A PG P +L + L RS R Q + P H QR GA
Sbjct: 163 CRKTPSSLPSFTTT-APPGKPLPTSLQV-LSRSSR-AQSAIDTFPHHLPAQREPEKEAGA 219
Query: 118 AAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAP 154
A PR + P R R LP A GAAP
Sbjct: 220 GALPR----------TTPGRTRELERNLPQVAAGAAP 246
>gi|4503119 cancer/testis antigen 1B [Homo sapiens]
Length = 180
Score = 34.3 bits (77), Expect = 0.055
Identities = 28/71 (39%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 102 PRRPGHDDGQRPSGGAAAAPRRGAQLRR-PRHSHPTRARRCPGGLP-GHAGGAAPGRGAA 159
P PG DG P G A GA R PR + RA GG P G GGAA G
Sbjct: 18 PGGPGIPDG--PGGNAGGPGEAGATGGRGPRGAGAARASGPGGGAPRGPHGGAASGLNGC 75
Query: 160 GRARCLGPSAR 170
R GP +R
Sbjct: 76 CRCGARGPESR 86
>gi|239754772 PREDICTED: hypothetical protein [Homo sapiens]
Length = 95
Score = 34.3 bits (77), Expect = 0.055
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 89 MLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQ-LRRPRHSHPTRARRCPGGLPG 147
+L RSQ ++ PR+ H +R + A PR G R P + R G+PG
Sbjct: 4 VLPRSQASRRERRPRQRQHRGRERRTRRDAQGPRGGGPGFRAGGRRTPDKGRPGSPGVPG 63
Query: 148 HAGGAAPGRGAAGRARCLG 166
G A G AA R R G
Sbjct: 64 GGGAEAWGPRAASRTRLAG 82
>gi|239749310 PREDICTED: hypothetical protein XP_002346992 [Homo
sapiens]
Length = 95
Score = 34.3 bits (77), Expect = 0.055
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 89 MLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQ-LRRPRHSHPTRARRCPGGLPG 147
+L RSQ ++ PR+ H +R + A PR G R P + R G+PG
Sbjct: 4 VLPRSQASRRERRPRQRQHRGRERRTRRDAQGPRGGGPGFRAGGRRTPDKGRPGSPGVPG 63
Query: 148 HAGGAAPGRGAAGRARCLG 166
G A G AA R R G
Sbjct: 64 GGGAEAWGPRAASRTRLAG 82
>gi|239743404 PREDICTED: hypothetical protein XP_002342840 [Homo
sapiens]
Length = 95
Score = 34.3 bits (77), Expect = 0.055
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 89 MLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQ-LRRPRHSHPTRARRCPGGLPG 147
+L RSQ ++ PR+ H +R + A PR G R P + R G+PG
Sbjct: 4 VLPRSQASRRERRPRQRQHRGRERRTRRDAQGPRGGGPGFRAGGRRTPDKGRPGSPGVPG 63
Query: 148 HAGGAAPGRGAAGRARCLG 166
G A G AA R R G
Sbjct: 64 GGGAEAWGPRAASRTRLAG 82
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.142 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,668,579
Number of Sequences: 37866
Number of extensions: 596163
Number of successful extensions: 3993
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 438
Number of HSP's that attempted gapping in prelim test: 3488
Number of HSP's gapped (non-prelim): 919
length of query: 173
length of database: 18,247,518
effective HSP length: 95
effective length of query: 78
effective length of database: 14,650,248
effective search space: 1142719344
effective search space used: 1142719344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.