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Search of human proteins with 17149828
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17149828 NMDA receptor regulated 1 [Homo sapiens]
(866 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17149828 NMDA receptor regulated 1 [Homo sapiens] 1754 0.0
gi|33356128 NMDA receptor regulated 1-like protein isoform 1 [Ho... 1264 0.0
gi|160707985 NMDA receptor regulated 1-like protein isoform 3 [H... 664 0.0
gi|33356130 NMDA receptor regulated 1-like protein isoform 2 [Ho... 491 e-138
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-04
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 45 2e-04
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 45 4e-04
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 45 4e-04
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 45 4e-04
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 44 5e-04
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 44 5e-04
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 44 5e-04
gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo ... 43 0.001
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 42 0.002
gi|58330892 interferon-induced protein with tetratricopeptide re... 42 0.002
gi|221219020 NYD-SP11 protein [Homo sapiens] 42 0.003
gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens] 42 0.003
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 42 0.003
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 42 0.003
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 42 0.003
gi|7661952 squamous cell carcinoma antigen recognized by T cells... 42 0.003
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 42 0.003
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 42 0.003
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 42 0.003
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 41 0.004
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo... 41 0.005
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 41 0.005
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 40 0.007
gi|92859701 myosin VI [Homo sapiens] 40 0.007
>gi|17149828 NMDA receptor regulated 1 [Homo sapiens]
Length = 866
Score = 1754 bits (4542), Expect = 0.0
Identities = 866/866 (100%), Positives = 866/866 (100%)
Query: 1 MPAVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLG 60
MPAVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLG
Sbjct: 1 MPAVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLG 60
Query: 61 KKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDL 120
KKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDL
Sbjct: 61 KKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDL 120
Query: 121 SLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQT 180
SLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQT
Sbjct: 121 SLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQT 180
Query: 181 SPDKVDYEYSELLLYQNQVLREAGLYREALEHLCTYEKQICDKLAVEETKGELLLQLCRL 240
SPDKVDYEYSELLLYQNQVLREAGLYREALEHLCTYEKQICDKLAVEETKGELLLQLCRL
Sbjct: 181 SPDKVDYEYSELLLYQNQVLREAGLYREALEHLCTYEKQICDKLAVEETKGELLLQLCRL 240
Query: 241 EDAADVYRGLQERNPENWAYYKGLEKALKPANMLERLKIYEEAWTKYPRGLVPRRLPLNF 300
EDAADVYRGLQERNPENWAYYKGLEKALKPANMLERLKIYEEAWTKYPRGLVPRRLPLNF
Sbjct: 241 EDAADVYRGLQERNPENWAYYKGLEKALKPANMLERLKIYEEAWTKYPRGLVPRRLPLNF 300
Query: 301 LSGEKFKECLDKFLRMNFSKGCPPVFNTLRSLYKDKEKVAIIEELVVGYETSLKSCRLFN 360
LSGEKFKECLDKFLRMNFSKGCPPVFNTLRSLYKDKEKVAIIEELVVGYETSLKSCRLFN
Sbjct: 301 LSGEKFKECLDKFLRMNFSKGCPPVFNTLRSLYKDKEKVAIIEELVVGYETSLKSCRLFN 360
Query: 361 PNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYKH 420
PNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYKH
Sbjct: 361 PNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYKH 420
Query: 421 AGNIKEAARWMDEAQALDTADRFINSKCAKYMLKANLIKEAEEMCSKFTREGTSAVENLN 480
AGNIKEAARWMDEAQALDTADRFINSKCAKYMLKANLIKEAEEMCSKFTREGTSAVENLN
Sbjct: 421 AGNIKEAARWMDEAQALDTADRFINSKCAKYMLKANLIKEAEEMCSKFTREGTSAVENLN 480
Query: 481 EMQCMWFQTECAQAYKAMNKFGEALKKCHEIERHFIEITDDQFDFHTYCMRKITLRSYVD 540
EMQCMWFQTECAQAYKAMNKFGEALKKCHEIERHFIEITDDQFDFHTYCMRKITLRSYVD
Sbjct: 481 EMQCMWFQTECAQAYKAMNKFGEALKKCHEIERHFIEITDDQFDFHTYCMRKITLRSYVD 540
Query: 541 LLKLEDVLRQHPFYFKAARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQR 600
LLKLEDVLRQHPFYFKAARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQR
Sbjct: 541 LLKLEDVLRQHPFYFKAARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQR 600
Query: 601 RAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKF 660
RAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKF
Sbjct: 601 RAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKF 660
Query: 661 LTPLKNLVKNKIETHLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAV 720
LTPLKNLVKNKIETHLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAV
Sbjct: 661 LTPLKNLVKNKIETHLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAV 720
Query: 721 CESKDLSDTVRTVLKQEMNRLFGATNPKNFNETFLKRNSDSLPHRLSAAKMVYYLDPSSQ 780
CESKDLSDTVRTVLKQEMNRLFGATNPKNFNETFLKRNSDSLPHRLSAAKMVYYLDPSSQ
Sbjct: 721 CESKDLSDTVRTVLKQEMNRLFGATNPKNFNETFLKRNSDSLPHRLSAAKMVYYLDPSSQ 780
Query: 781 KRAIELATTLDESLTNRNLQTCMEVLEALYDGSLGDCKEAAEIYRANCHKLFPYALAFMP 840
KRAIELATTLDESLTNRNLQTCMEVLEALYDGSLGDCKEAAEIYRANCHKLFPYALAFMP
Sbjct: 781 KRAIELATTLDESLTNRNLQTCMEVLEALYDGSLGDCKEAAEIYRANCHKLFPYALAFMP 840
Query: 841 PGYEEDMKITVNGDSSAEAEELANEI 866
PGYEEDMKITVNGDSSAEAEELANEI
Sbjct: 841 PGYEEDMKITVNGDSSAEAEELANEI 866
>gi|33356128 NMDA receptor regulated 1-like protein isoform 1 [Homo
sapiens]
Length = 864
Score = 1264 bits (3271), Expect = 0.0
Identities = 611/866 (70%), Positives = 741/866 (85%), Gaps = 2/866 (0%)
Query: 1 MPAVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLG 60
MP V LPPKE+ LFKRIL+CYE KQY+NGLKFCK ILSNPKFAEHGETLAMKGLTLNCLG
Sbjct: 1 MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLTLNCLG 60
Query: 61 KKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDL 120
KKEEAYE VR+GLRND+KSHVCWHVYGLLQRSDKKYDEAIKCYRNALK DKDNLQILRDL
Sbjct: 61 KKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKLDKDNLQILRDL 120
Query: 121 SLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQT 180
SLLQIQMRDLEGYRETRYQLLQLRP QRASWIGYAIAYHLL+DY+MA K+LEEFR+TQQ
Sbjct: 121 SLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKDYDMALKLLEEFRQTQQV 180
Query: 181 SPDKVDYEYSELLLYQNQVLREAGLYREALEHLCTYEKQICDKLAVEETKGELLLQLCRL 240
P+K+DYEYSEL+LYQNQV+REA L +E+LEH+ YEKQICDKL VEE KGE+LL+L RL
Sbjct: 181 PPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEKQICDKLLVEEIKGEILLKLGRL 240
Query: 241 EDAADVYRGLQERNPENWAYYKGLEKALKPANMLERLKIYEEAWTKYPRGLVPRRLPLNF 300
++A++V++ L +RN ENW YY+GLEKAL+ + + ERL+IYEE ++P+ + PRRLPL
Sbjct: 241 KEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIYEEISKQHPKAITPRRLPLTL 300
Query: 301 LSGEKFKECLDKFLRMNFSKGCPPVFNTLRSLYKDKEKVAIIEELVVGYETSLKSCRLFN 360
+ GE+F+E +DKFLR+NFSKGCPP+F TL+SLY + EKV+II+ELV YE SLK+C F+
Sbjct: 301 VPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTEKVSIIQELVTNYEASLKTCDFFS 360
Query: 361 PNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYKH 420
P ++G++EPPTTLLWVQY+LAQH+DK+GQ S+AL+YIN AI STPTLIELF +KAKIYKH
Sbjct: 361 PYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYINAAIASTPTLIELFYMKAKIYKH 420
Query: 421 AGNIKEAARWMDEAQALDTADRFINSKCAKYMLKANLIKEAEEMCSKFTREGTSAVENLN 480
GN+KEAA+WMDEAQ+LDTADRFINSKCAKYML+AN+IKEAEEMCSKFTREGTSA+ENLN
Sbjct: 421 IGNLKEAAKWMDEAQSLDTADRFINSKCAKYMLRANMIKEAEEMCSKFTREGTSAMENLN 480
Query: 481 EMQCMWFQTECAQAYKAMNKFGEALKKCHEIERHFIEITDDQFDFHTYCMRKITLRSYVD 540
EMQCMWFQTEC AY+ + ++G+ALKKCHE+ERHF EITDDQFDFHTYCMRK+TLR+YVD
Sbjct: 481 EMQCMWFQTECISAYQRLGRYGDALKKCHEVERHFFEITDDQFDFHTYCMRKMTLRAYVD 540
Query: 541 LLKLEDVLRQHPFYFKAARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQR 600
LL+LED+LR+H FYFKAAR AIEIYLKL+DNPLT+E+K+ E ++ N+S KELKK+ +KQR
Sbjct: 541 LLRLEDILRRHAFYFKAARSAIEIYLKLYDNPLTNESKQQEINSENLSAKELKKMLSKQR 600
Query: 601 RAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKF 660
RAQKKA++EEE+K+AE+E+QQ+NQKKK+D+++EE G KEELIPEKL +VE PLEEA+KF
Sbjct: 601 RAQKKAKLEEERKHAERERQQKNQKKKRDEEEEEASGLKEELIPEKLERVENPLEEAVKF 660
Query: 661 LTPLKNLVKNKIETHLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAV 720
L PLKNLV + I+THL AFEIYFRK KFLLMLQSVKRAFAI+S++PWLHEC+IR F+ +V
Sbjct: 661 LIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQSVKRAFAINSNNPWLHECLIR-FSKSV 719
Query: 721 CESKDLSDTVRTVLKQEMNRLFGATNPKNFNETFLKRNSDSLPHRLSAAKMVYYLDPSSQ 780
+L D V VL QEM ++F + ++FNE FLKRN+ SL H LS AKM+Y+LD S Q
Sbjct: 720 SNHSNLPDIVSKVLSQEMQKIFVKKDLESFNEDFLKRNATSLQHLLSGAKMMYFLDKSRQ 779
Query: 781 KRAIELATTLDESLTNRNLQTCMEVLEALYDGSLGDCKEAAEIYRANCHKLFPYALAFMP 840
++AI +AT LDE++ +++++T ++V EAL DGS G+C E YR CH L P+ AF+P
Sbjct: 780 EKAIAIATRLDETIKDKDVKTLIKVSEALLDGSFGNCSSQYEEYRMACHNLLPFTSAFLP 839
Query: 841 PGYEEDMKITVNGDSSAEAEELANEI 866
E D V + +A + LANEI
Sbjct: 840 AVNEVD-NPNVALNHTANYDVLANEI 864
>gi|160707985 NMDA receptor regulated 1-like protein isoform 3 [Homo
sapiens]
Length = 429
Score = 664 bits (1713), Expect = 0.0
Identities = 316/419 (75%), Positives = 372/419 (88%)
Query: 1 MPAVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLG 60
MP V LPPKE+ LFKRIL+CYE KQY+NGLKFCK ILSNPKFAEHGETLAMKGLTLNCLG
Sbjct: 1 MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLTLNCLG 60
Query: 61 KKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDL 120
KKEEAYE VR+GLRND+KSHVCWHVYGLLQRSDKKYDEAIKCYRNALK DKDNLQILRDL
Sbjct: 61 KKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKLDKDNLQILRDL 120
Query: 121 SLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQT 180
SLLQIQMRDLEGYRETRYQLLQLRP QRASWIGYAIAYHLL+DY+MA K+LEEFR+TQQ
Sbjct: 121 SLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKDYDMALKLLEEFRQTQQV 180
Query: 181 SPDKVDYEYSELLLYQNQVLREAGLYREALEHLCTYEKQICDKLAVEETKGELLLQLCRL 240
P+K+DYEYSEL+LYQNQV+REA L +E+LEH+ YEKQICDKL VEE KGE+LL+L RL
Sbjct: 181 PPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEKQICDKLLVEEIKGEILLKLGRL 240
Query: 241 EDAADVYRGLQERNPENWAYYKGLEKALKPANMLERLKIYEEAWTKYPRGLVPRRLPLNF 300
++A++V++ L +RN ENW YY+GLEKAL+ + + ERL+IYEE ++P+ + PRRLPL
Sbjct: 241 KEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIYEEISKQHPKAITPRRLPLTL 300
Query: 301 LSGEKFKECLDKFLRMNFSKGCPPVFNTLRSLYKDKEKVAIIEELVVGYETSLKSCRLFN 360
+ GE+F+E +DKFLR+NFSKGCPP+F TL+SLY + EKV+II+ELV YE SLK+C F+
Sbjct: 301 VPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTEKVSIIQELVTNYEASLKTCDFFS 360
Query: 361 PNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYK 419
P ++G++EPPTTLLWVQY+LAQH+DK+GQ S+AL+YIN AI STPTLIELF +KAKIYK
Sbjct: 361 PYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYINAAIASTPTLIELFYMKAKIYK 419
>gi|33356130 NMDA receptor regulated 1-like protein isoform 2 [Homo
sapiens]
Length = 311
Score = 491 bits (1264), Expect = e-138
Identities = 235/303 (77%), Positives = 270/303 (89%)
Query: 1 MPAVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLG 60
MP V LPPKE+ LFKRIL+CYE KQY+NGLKFCK ILSNPKFAEHGETLAMKGLTLNCLG
Sbjct: 1 MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLTLNCLG 60
Query: 61 KKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDL 120
KKEEAYE VR+GLRND+KSHVCWHVYGLLQRSDKKYDEAIKCYRNALK DKDNLQILRDL
Sbjct: 61 KKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKLDKDNLQILRDL 120
Query: 121 SLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQT 180
SLLQIQMRDLEGYRETRYQLLQLRP QRASWIGYAIAYHLL+DY+MA K+LEEFR+TQQ
Sbjct: 121 SLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKDYDMALKLLEEFRQTQQV 180
Query: 181 SPDKVDYEYSELLLYQNQVLREAGLYREALEHLCTYEKQICDKLAVEETKGELLLQLCRL 240
P+K+DYEYSEL+LYQNQV+REA L +E+LEH+ YEKQICDKL VEE KGE+LL+L RL
Sbjct: 181 PPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEKQICDKLLVEEIKGEILLKLGRL 240
Query: 241 EDAADVYRGLQERNPENWAYYKGLEKALKPANMLERLKIYEEAWTKYPRGLVPRRLPLNF 300
++A++V++ L +RN ENW YY+GLEKAL+ + + ERL+IYEE ++P+ + PRRLPL
Sbjct: 241 KEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIYEEISKQHPKAITPRRLPLTL 300
Query: 301 LSG 303
+ G
Sbjct: 301 VPG 303
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 564 IYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRN 623
++L LH P +E KE E + K+ KK + K+++ +KK + +++KK K K++R
Sbjct: 92 LHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKK-KKKKKRKRKRKRKRK 150
Query: 624 QKKKKDDDDEEIG 636
+KKK+ ++ G
Sbjct: 151 RKKKRKKKKKKTG 163
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 45.4 bits (106), Expect = 2e-04
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 574 TDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDE 633
T+E +E E +K +K + K+++ + K + ++K E++K++R +KKKK++++
Sbjct: 16 TEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEER 75
Query: 634 EIGGPKEELIPEKLAKVE 651
E +EE E+ K E
Sbjct: 76 EEEEEEEEEEKEEEEKEE 93
Score = 40.8 bits (94), Expect = 0.005
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 574 TDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDE 633
T++ KE E + K KK + ++ R +++ + EEEK+ EKE+ +R +KKKK E
Sbjct: 49 TEKRKEKEEEEKKRKRKRKKK-KEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKE 107
Query: 634 E 634
E
Sbjct: 108 E 108
Score = 35.4 bits (80), Expect = 0.23
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIE--------EEKKNAEKEKQQRNQKKK 627
E K+ +T +KE ++ + K++R +KK + E EE+K E++++ R +KKK
Sbjct: 41 EKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKK 100
Query: 628 K 628
K
Sbjct: 101 K 101
Score = 33.9 bits (76), Expect = 0.67
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKK 628
+E +E E + +E +K ++R+ +KK + +EE++ EK+K++R + KKK
Sbjct: 72 EEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEE--EKKKKRRRKTKKK 123
Score = 33.5 bits (75), Expect = 0.87
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKK 627
+E + E + +KE ++ +RR +KK + +E++ +K+K++R KKK
Sbjct: 71 EEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 30.4 bits (67), Expect = 7.4
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 593 KKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKE 640
KK + K++ ++ + EE ++ EKE +++ ++K+K + E+ KE
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKE 48
Score = 30.0 bits (66), Expect = 9.7
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 590 KELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQK-----KKKDDDDEEIGGPKEELIP 644
K+ KK + + ++ + EEE++ K K++R +K KKK + E KEE
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60
Query: 645 EKLAKVETPLEE 656
++ K + EE
Sbjct: 61 KRKRKRKKKKEE 72
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 44.7 bits (104), Expect = 4e-04
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 573 LTDENKEH-EADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDD 631
LTDE K A+TA + +K NKQ + ++ Q EE+K+ KE+Q++ KKK++ +
Sbjct: 457 LTDEEKARIHAETALLMEK------NKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAE 510
Query: 632 DEEIGGPKEELIPEKLAKVET 652
+ EI K++ E++ K E+
Sbjct: 511 ENEI-TEKQQKAKEEMEKKES 530
Score = 33.9 bits (76), Expect = 0.67
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 14/83 (16%)
Query: 573 LTDENKEHEADTANMSDKELKKLR--NKQRRAQKKAQIEE-------EKKNAEKEKQQRN 623
L ++NK+ + +++ +KLR ++++A+KK + EE +K E EK++
Sbjct: 472 LMEKNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESE 531
Query: 624 QKKKKDDD-----DEEIGGPKEE 641
Q KK+D + +EI G K +
Sbjct: 532 QAKKEDKETSAKRGKEITGVKRQ 554
Score = 33.1 bits (74), Expect = 1.1
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 558 ARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEE----EKK 613
ARI E L + N E +E + + KE + ++++A+KK + EE EK+
Sbjct: 463 ARIHAETALLMEKNKQEKELRERQQE----EQKEKLRKEEQEQKAKKKQEAEENEITEKQ 518
Query: 614 NAEKEKQQRNQKKKKDDDDEE 634
KE+ ++ + ++ +D+E
Sbjct: 519 QKAKEEMEKKESEQAKKEDKE 539
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 44.7 bits (104), Expect = 4e-04
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 573 LTDENKEH-EADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDD 631
LTDE K A+TA + +K NKQ + ++ Q EE+K+ KE+Q++ KKK++ +
Sbjct: 457 LTDEEKARIHAETALLMEK------NKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAE 510
Query: 632 DEEIGGPKEELIPEKLAKVET 652
+ EI K++ E++ K E+
Sbjct: 511 ENEI-TEKQQKAKEEMEKKES 530
Score = 33.9 bits (76), Expect = 0.67
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 14/83 (16%)
Query: 573 LTDENKEHEADTANMSDKELKKLR--NKQRRAQKKAQIEE-------EKKNAEKEKQQRN 623
L ++NK+ + +++ +KLR ++++A+KK + EE +K E EK++
Sbjct: 472 LMEKNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESE 531
Query: 624 QKKKKDDD-----DEEIGGPKEE 641
Q KK+D + +EI G K +
Sbjct: 532 QAKKEDKETSAKRGKEITGVKRQ 554
Score = 33.1 bits (74), Expect = 1.1
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 558 ARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEE----EKK 613
ARI E L + N E +E + + KE + ++++A+KK + EE EK+
Sbjct: 463 ARIHAETALLMEKNKQEKELRERQQE----EQKEKLRKEEQEQKAKKKQEAEENEITEKQ 518
Query: 614 NAEKEKQQRNQKKKKDDDDEE 634
KE+ ++ + ++ +D+E
Sbjct: 519 QKAKEEMEKKESEQAKKEDKE 539
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 44.7 bits (104), Expect = 4e-04
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 573 LTDENKEH-EADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDD 631
LTDE K A+TA + +K NKQ + ++ Q EE+K+ KE+Q++ KKK++ +
Sbjct: 457 LTDEEKARIHAETALLMEK------NKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAE 510
Query: 632 DEEIGGPKEELIPEKLAKVET 652
+ EI K++ E++ K E+
Sbjct: 511 ENEI-TEKQQKAKEEMEKKES 530
Score = 33.9 bits (76), Expect = 0.67
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 14/83 (16%)
Query: 573 LTDENKEHEADTANMSDKELKKLR--NKQRRAQKKAQIEE-------EKKNAEKEKQQRN 623
L ++NK+ + +++ +KLR ++++A+KK + EE +K E EK++
Sbjct: 472 LMEKNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESE 531
Query: 624 QKKKKDDD-----DEEIGGPKEE 641
Q KK+D + +EI G K +
Sbjct: 532 QAKKEDKETSAKRGKEITGVKRQ 554
Score = 33.1 bits (74), Expect = 1.1
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 558 ARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEE----EKK 613
ARI E L + N E +E + + KE + ++++A+KK + EE EK+
Sbjct: 463 ARIHAETALLMEKNKQEKELRERQQE----EQKEKLRKEEQEQKAKKKQEAEENEITEKQ 518
Query: 614 NAEKEKQQRNQKKKKDDDDEE 634
KE+ ++ + ++ +D+E
Sbjct: 519 QKAKEEMEKKESEQAKKEDKE 539
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 44.3 bits (103), Expect = 5e-04
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 34/216 (15%)
Query: 583 DTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEEL 642
DT + ++ +++ +A+K+ ++E+ EK + + ++KKK D K +L
Sbjct: 723 DTNKDISRSFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKSKDRPSKLEKKNDL 782
Query: 643 IPEKLAKVETPLEEAIKFLTPLKNLVKNKIETHLFAFEIYFRKEKFLLMLQSVKRAFAID 702
+K++K E+ F + L K K+ AF+ Y K +F L + K + + D
Sbjct: 783 KEDKISK-----EKEKIFKEDKEKLKKEKVYREDSAFDEYCNKNQF-LENEDTKFSLSDD 836
Query: 703 SSHPWLHECMIRLF--------NTAVCESKDL-SDTVRTVL-------KQEMNRLFGATN 746
W + F ++ V + +D+ SD+V ++ +E R A
Sbjct: 837 QRDRWFSDLSDSSFDFKGEDSWDSPVTDYRDMKSDSVAKLILETVKEDSKERRRDSRARE 896
Query: 747 PKNFNETFLKRNSDSLPHRLSAAKMVYYLDPSSQKR 782
+++ E F ++ YLD +S+KR
Sbjct: 897 KRDYREPFFRKKDRD------------YLDKNSEKR 920
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 44.3 bits (103), Expect = 5e-04
Identities = 26/86 (30%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKK-NAEKEKQQRNQKKKKDDDDE 633
++ +E + + +KEL+K + KQR +K+ + E+EK+ +KEK++ QK K+ + +
Sbjct: 528 EKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKEQEKEC 587
Query: 634 EIGGPKEELIPEKLAKVETPLEEAIK 659
E+ +E+L EK+ E LE ++
Sbjct: 588 ELEKEREKL-EEKIEPREPNLEPMVE 612
Score = 43.1 bits (100), Expect = 0.001
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 568 LHDNPLTDENKEHEADTANMSDKELKKL----RNKQRRAQKKAQIEEEKK-NAEKEKQQR 622
L P +E +E E + +KEL+K R K+R ++ Q E+EK+ E+EKQ+
Sbjct: 495 LEKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQRE 554
Query: 623 NQKKKKDDDDEEIGGPKE---ELIPEKLAKVETPLEE 656
+K++K + ++E+ KE EL K + E LE+
Sbjct: 555 MEKERKQEKEKELERQKEKEKELQKMKEQEKECELEK 591
Score = 39.7 bits (91), Expect = 0.012
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEK-------KNAEKEKQQRNQKKK 627
+ KE E + +KE +K R +Q+ +K+ + E+EK + EKEK+ QK+K
Sbjct: 514 EREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEK 573
Query: 628 KDDDDEEIGGPKEELIPEKLAKVETPLEEAIKFLTP-LKNLVK--------NKIETHLFA 678
++E+ KE+ +L K LEE I+ P L+ +V+ NK E +F
Sbjct: 574 ----EKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQESENSCNKEEEPVFT 629
Query: 679 FEIYFRKEK 687
+ R EK
Sbjct: 630 RQDSNRSEK 638
Score = 31.6 bits (70), Expect = 3.3
Identities = 17/81 (20%), Positives = 44/81 (54%)
Query: 596 RNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKVETPLE 655
R K+R +K+ + E+E++ ++ ++ R ++++K+ + E+ + E+ E+ + E LE
Sbjct: 509 REKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELE 568
Query: 656 EAIKFLTPLKNLVKNKIETHL 676
+ L+ + + + E L
Sbjct: 569 RQKEKEKELQKMKEQEKECEL 589
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 44.3 bits (103), Expect = 5e-04
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 567 KLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQ-- 624
+LH + + + ++E+KK +++ +K+ + EEE K E+E++ RN+
Sbjct: 356 RLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNE 415
Query: 625 ---KKKKDDDDEEIGGPKEELIP-------EKLAKV-ETPLEEA 657
+ K ++D++E GG K E P E +V E PL+EA
Sbjct: 416 EEGESKDEEDEDEDGGQKPEGEPQQDPGTEETYGEVEEEPLDEA 459
Score = 35.0 bits (79), Expect = 0.30
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 570 DNPLTDENKEHEADTANMSDKELKK--------LRNKQRRAQKKAQIEEEKKNAEKEKQQ 621
D E+++ EA + K+ +K ++ K+ KK EEE K E+++++
Sbjct: 340 DEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKK---EEEMKKKEEKEEE 396
Query: 622 RNQKKKKDDDDEEIGGPKEE 641
++ K+ +++EEI EE
Sbjct: 397 EEEEMKQKEEEEEIRNKNEE 416
Score = 33.1 bits (74), Expect = 1.1
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 575 DENKEHEADTANMSDKELKKLR---NKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDD 631
+E E E + D+E ++ R QR+ + Q E ++K E+ K++ KKK++ +
Sbjct: 335 EEESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKE 394
Query: 632 DEE 634
+EE
Sbjct: 395 EEE 397
>gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo
sapiens]
Length = 482
Score = 43.1 bits (100), Expect = 0.001
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 567 KLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKK 626
+LH+ L E K E +E K R +++ + K Q EE+++ +E++Q+ Q+K
Sbjct: 70 RLHEEWLLREQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQRKEREEEEQKRQEK 129
Query: 627 KKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKFLTP 663
K+ KEE + + L + E LE + P
Sbjct: 130 KE----------KEEALQKMLDQAENELENGTTWQNP 156
Score = 39.3 bits (90), Expect = 0.016
Identities = 28/116 (24%), Positives = 65/116 (56%), Gaps = 14/116 (12%)
Query: 567 KLHDNPLTDENKEHEA-------DTANMSDKELKKLRN----KQRRAQKKAQIEEEKKNA 615
+L D+ L+ + +E + + + ++E ++L ++++AQ++ +I++EK+ A
Sbjct: 36 RLRDSGLSQKEEEEDTFIEEQQLEEEKLLERERQRLHEEWLLREQKAQEEFRIKKEKEEA 95
Query: 616 EKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKVETPLEEAI-KFLTPLKNLVKN 670
K++Q+ ++K K+ +E+ +EE ++ K E EEA+ K L +N ++N
Sbjct: 96 AKKRQEEQERKLKEQWEEQQRKEREEEEQKRQEKKEK--EEALQKMLDQAENELEN 149
Score = 30.0 bits (66), Expect = 9.7
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQ----KKKKDD 630
++ K+ + A + D L + ++ ++ Q+EEEK E+E+Q+ ++ +++K
Sbjct: 25 EKRKKRRQELARLRDSGLSQKEEEEDTFIEEQQLEEEKL-LERERQRLHEEWLLREQKAQ 83
Query: 631 DDEEIGGPKEELIPEKLAKVETPLEE 656
++ I KEE ++ + E L+E
Sbjct: 84 EEFRIKKEKEEAAKKRQEEQERKLKE 109
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 42.4 bits (98), Expect = 0.002
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 17/124 (13%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIE---------EEKKNAEKEKQQRNQK- 625
E KE E + +++ KK R K+RR ++K + E + KK ++K++RN+K
Sbjct: 119 ERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE 178
Query: 626 KKKDDDDEEIGGPKEELIPEKLAKVE------TPLEEAIKFLTPLKNLVKNKIE-THLFA 678
+KK+ + +E K+E E+ K E T + + PL+ N++ T +F
Sbjct: 179 RKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPLRESAFNRVTVTGVFR 238
Query: 679 FEIY 682
+ I+
Sbjct: 239 YRIF 242
Score = 36.6 bits (83), Expect = 0.10
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 589 DKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
+K+ K+ R K+RR +KK E+KK K++ +R +KKKK+ + E
Sbjct: 83 EKQRKERREKERRKRKK----EKKKRERKQRGRRERKKKKERKERE 124
Score = 35.8 bits (81), Expect = 0.18
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 575 DENKEHEADTANMSDKELKKL-RNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKK 628
+ KE + + K+ KK R K+R ++K + ++ K+ EKE+++R ++KKK
Sbjct: 49 EREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKK 103
Score = 35.4 bits (80), Expect = 0.23
Identities = 13/54 (24%), Positives = 34/54 (62%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKK 628
++ ++ + K+ KK R +++R +++ + ++E+K E+E +QR ++K+K
Sbjct: 83 EKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRK 136
Score = 35.4 bits (80), Expect = 0.23
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKK 628
+ KE KE KK KQR +++ + +E K+ + KQ+R +K+KK
Sbjct: 85 QRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKK 137
Score = 33.9 bits (76), Expect = 0.67
Identities = 13/53 (24%), Positives = 32/53 (60%)
Query: 578 KEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDD 630
+E E + K+ KK R K+ R +++ + +E++ KE++++ ++K+K +
Sbjct: 48 REREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKE 100
Score = 31.6 bits (70), Expect = 3.3
Identities = 14/68 (20%), Positives = 36/68 (52%)
Query: 574 TDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDE 633
++ KE ++E ++ R + ++ +KK + E K E+++++R +++K+ + E
Sbjct: 34 SERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKE 93
Query: 634 EIGGPKEE 641
KE+
Sbjct: 94 RRKRKKEK 101
Score = 31.6 bits (70), Expect = 3.3
Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKK--AQIEEEKKNAEKEKQQRNQKKKK 628
+ KE E +KE +K + ++++ ++K + E +KK KE+++ N+++++
Sbjct: 78 KRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRE 132
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 42.4 bits (98), Expect = 0.002
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 563 EIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQR 622
E+ K P+ E K + + KE+KK K+ + + K + ++ E +K+++
Sbjct: 659 EVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEK 718
Query: 623 NQKKKKDDDDEEIGGPKEEL--IPEKLAKVETPLEEAIK 659
+ KK++ + PK+E+ +P+ K TPL EA K
Sbjct: 719 KEVKKEEKE------PKKEIKKLPKDAKKSSTPLSEAKK 751
Score = 37.0 bits (84), Expect = 0.079
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 572 PLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDD 631
P +E +A+ A ++K K++ +K+ +++ E K EKEK ++ KK+D
Sbjct: 608 PSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKT 667
Query: 632 D-EEIGGPKEELI---------------PEKLAKVETPLEEAIK 659
++ PK+E + P+K K ETP +E K
Sbjct: 668 PIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKK 711
Score = 32.0 bits (71), Expect = 2.5
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 19/100 (19%)
Query: 570 DNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEE-----KKNAEKEKQQRNQ 624
D P+ E K + K++ +K+ + KA++ E+ K A KEK + +
Sbjct: 591 DKPIKTETKPSVTE---------KEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKE 641
Query: 625 KK-KKDDDDEEIGGPKEELIPEK----LAKVETPLEEAIK 659
K K +D EE PK+E+ ++ + K E P +E +K
Sbjct: 642 TKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVK 681
>gi|58330892 interferon-induced protein with tetratricopeptide
repeats 1-like [Homo sapiens]
Length = 474
Score = 42.0 bits (97), Expect = 0.002
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 375 WVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYK-HAGNIKEAARWMDE 433
+V Y A+ Y + G ALE + A+E+TPT L Y+ IKEA W
Sbjct: 252 YVFQYAAKFYRRKGSVDKALELLKMALETTPTSAFLHHQMGLCYRAQMIQIKEATNWQPR 311
Query: 434 AQALDTADRFINSKCAKYMLKANLIKEAEEM 464
Q +T DR + K+ K ++K EM
Sbjct: 312 GQDRETVDRLVQLAICKFE-KTIMLKRTFEM 341
Score = 33.5 bits (75), Expect = 0.87
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 18/162 (11%)
Query: 304 EKFKECLDKFLRMNFSKGCPPVFNT--LRSLYK-DKEKVAIIEELVVGYETSLKSCRLFN 360
E+ K C +K L N P FNT ++Y+ DK A ++ RL N
Sbjct: 158 ERAKTCFEKALEGNPEN---PEFNTGYAITVYRLDKFNTASGRNKAFSLHVLKRAVRL-N 213
Query: 361 PNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYKH 420
P+D ++++ LA GQ + +YI A+ S + +F AK Y+
Sbjct: 214 PDD----------VYIRVLLALKLQDEGQEAEGEKYIEEALTSISSQAYVFQYAAKFYRR 263
Query: 421 AGNIKEAARWMDEAQALDTADRFINSKCAK-YMLKANLIKEA 461
G++ +A + A F++ + Y + IKEA
Sbjct: 264 KGSVDKALELLKMALETTPTSAFLHHQMGLCYRAQMIQIKEA 305
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 41.6 bits (96), Expect = 0.003
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 488 QTECAQAYKAMNKFGEALKK----CHEIERHFIEITDDQFDFHTYCMRKITLRSYVDLLK 543
Q + A+A + + K E+L K ++I + ++T D+ RK+T + + + K
Sbjct: 2049 QRKLAKASRKLIKKRESLSKEPAKLNKILKALQKLTRDE--------RKLT-QEEIKMTK 2099
Query: 544 LEDVLRQHPFYFKAARIAIE-IYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRA 602
++ L + K R++IE L + + +++ E D ++ K+ +KL NK RR
Sbjct: 2100 MKRAL-----FVKERRLSIEQSKLDIKEWDFSEKRSELTKDEKKLARKQ-RKLANKMRRM 2153
Query: 603 QKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIP 644
K EEK E+ K R + DD+EE G +EE+IP
Sbjct: 2154 INK----EEKMTEEESKLARKHSEVILDDEEEGGIEEEEVIP 2191
Score = 41.6 bits (96), Expect = 0.003
Identities = 17/74 (22%), Positives = 45/74 (60%)
Query: 573 LTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDD 632
L+ E +E + ++E+++ +++ ++ + + EK+ EK+K+++ +KK++ +
Sbjct: 2243 LSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEK 2302
Query: 633 EEIGGPKEELIPEK 646
EE+ KEE++ E+
Sbjct: 2303 EEVFEEKEEIMSEE 2316
Score = 38.1 bits (87), Expect = 0.035
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
+E +E E + ++E K+ + + +K + E++KK EK+K++ +K++ ++ EE
Sbjct: 2252 EEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEE 2311
Query: 635 IGGPK--EELIPEKLAKVETPLEEAI 658
I + E L E+ + LEE +
Sbjct: 2312 IMSEEETESLSDEEEEEESCSLEEEV 2337
Score = 37.0 bits (84), Expect = 0.079
Identities = 23/107 (21%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 566 LKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQK 625
L + L E + + ++++E +++ ++++ ++ +E++ +EK++ Q
Sbjct: 1728 LSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQH 1787
Query: 626 KKKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKFLTPLKNLVKNKI 672
K+K ++EE G K E + EK K+ E +++ ++ L KNK+
Sbjct: 1788 KEKMPEEEERLGRKREQLIEKKMKLAQKRE---RWINSMEELTKNKM 1831
Score = 36.6 bits (83), Expect = 0.10
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 573 LTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEK-------EKQQRNQK 625
L DE ++ E+ +S +E ++ ++ R +++ + EEE++ E+ EK++ +K
Sbjct: 2233 LLDELEKQES----LSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKK 2288
Query: 626 KKKDDDDEEIGGPKEELIPEK 646
KKK + +E KEE+ EK
Sbjct: 2289 KKKKEKKKEEVQEKEEVFEEK 2309
Score = 35.4 bits (80), Expect = 0.23
Identities = 16/81 (19%), Positives = 46/81 (56%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEI 635
E++EH ++ EL+K + +++ + EEE++ E +++ +K++++ +++++
Sbjct: 2221 ESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQV 2280
Query: 636 GGPKEELIPEKLAKVETPLEE 656
+EE +K K + ++E
Sbjct: 2281 EKEEEEKKKKKKEKKKEEVQE 2301
Score = 31.6 bits (70), Expect = 3.3
Identities = 14/76 (18%), Positives = 43/76 (56%)
Query: 581 EADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKE 640
E ++ +E++ L ++ + + + EEE++ E+E+++ ++++++ EE G ++
Sbjct: 2219 EVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEK 2278
Query: 641 ELIPEKLAKVETPLEE 656
++ E+ K + E+
Sbjct: 2279 QVEKEEEEKKKKKKEK 2294
Score = 31.2 bits (69), Expect = 4.3
Identities = 22/106 (20%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 563 EIYLKLHDNPLTDENKEHE---ADTANMSDKELKKLRNKQRRA-QKKAQIEEEKKNAEKE 618
E + ++ +N L+ ++KE + + + ++ ++ K+++ +++ I+EE K A
Sbjct: 1519 EEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQRHIQEEHKWARIH 1578
Query: 619 KQQRNQKKKKDDDDEEIGGPKEELIPE--KLAKVETPLEEAIKFLT 662
+++ +KK+ ++ ++ +E+L E +LA+ E L +A +T
Sbjct: 1579 RKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEERKLAQAYVKIT 1624
Score = 30.0 bits (66), Expect = 9.7
Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
+E +E E + + E K++ ++ +KK +E+KK +EK++ ++K++ +EE
Sbjct: 2260 EEVREEEEERKEEEEGEEKQVEKEEEEKKKKK--KEKKKEEVQEKEEVFEEKEEIMSEEE 2317
Query: 635 IGGPKEELIPEKLAKVETPLEEAIKFL 661
+E E+ +E ++ + L
Sbjct: 2318 TESLSDEEEEEESCSLEEEVDREKEIL 2344
>gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens]
Length = 597
Score = 41.6 bits (96), Expect = 0.003
Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 569 HDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKK--NAEKEKQQRNQKK 626
HD+ D+ +HE + R+K+++ +KK + E+EK + E+ K++ +K+
Sbjct: 47 HDSSYYDDRSDHERE------------RHKEKKKKKKKKSEKEKHLDDEERRKRKEEKKR 94
Query: 627 KKDDDDEEIGGPKEELIPEKLAKVETPLEEAIK 659
K++ + + G ++ P K +VE P + ++
Sbjct: 95 KREREHCDTEGEADDFDPGKKVEVEPPPDRPVR 127
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 41.6 bits (96), Expect = 0.003
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 567 KLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKK--AQIEEEKKNAEKEKQQRNQ 624
K+ N L ++N+E TA M + LKK + +++ ++K A+ E K A +EKQ+R +
Sbjct: 357 KMLKNHLRNDNQE----TAAMKPENLKKRKKRKKLKKRKEGAKAEHNLKVASEEKQERLE 412
Query: 625 KK--KKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKFLTPLKNLVKNKIETHLFAFEIY 682
+ K+ D + G K+E+ + K +++ K E + +
Sbjct: 413 RSENKQPQDSQSYGKKKDEMFGNFMLK---------------RDIAMLKEELYAIKNDSL 457
Query: 683 FRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAVCESKDLSDTVRTVLKQEMNRLF 742
+++K++ ++S+ A L+E MI S+ L+D LK E RL
Sbjct: 458 RKEKKYIQEIKSITEINANFEKSVRLNEEMIT--KKVAQYSQQLND-----LKAENARLN 510
Query: 743 GATNPKNFNETFLKRNSDSLPHRLSAA 769
+ N+ L+ +SL L+ A
Sbjct: 511 SKLEKEKHNKERLEAEVESLHSNLATA 537
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 41.6 bits (96), Expect = 0.003
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 567 KLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKK--AQIEEEKKNAEKEKQQRNQ 624
K+ N L ++N+E TA M + LKK + +++ ++K A+ E K A +EKQ+R +
Sbjct: 386 KMLKNHLRNDNQE----TAAMKPENLKKRKKRKKLKKRKEGAKAEHNLKVASEEKQERLE 441
Query: 625 KK--KKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKFLTPLKNLVKNKIETHLFAFEIY 682
+ K+ D + G K+E+ + K +++ K E + +
Sbjct: 442 RSENKQPQDSQSYGKKKDEMFGNFMLK---------------RDIAMLKEELYAIKNDSL 486
Query: 683 FRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAVCESKDLSDTVRTVLKQEMNRLF 742
+++K++ ++S+ A L+E MI S+ L+D LK E RL
Sbjct: 487 RKEKKYIQEIKSITEINANFEKSVRLNEEMIT--KKVAQYSQQLND-----LKAENARLN 539
Query: 743 GATNPKNFNETFLKRNSDSLPHRLSAA 769
+ N+ L+ +SL L+ A
Sbjct: 540 SKLEKEKHNKERLEAEVESLHSNLATA 566
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 41.6 bits (96), Expect = 0.003
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 567 KLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKK--AQIEEEKKNAEKEKQQRNQ 624
K+ N L ++N+E TA M + LKK + +++ ++K A+ E K A +EKQ+R +
Sbjct: 386 KMLKNHLRNDNQE----TAAMKPENLKKRKKRKKLKKRKEGAKAEHNLKVASEEKQERLE 441
Query: 625 KK--KKDDDDEEIGGPKEELIPEKLAKVETPLEEAIKFLTPLKNLVKNKIETHLFAFEIY 682
+ K+ D + G K+E+ + K +++ K E + +
Sbjct: 442 RSENKQPQDSQSYGKKKDEMFGNFMLK---------------RDIAMLKEELYAIKNDSL 486
Query: 683 FRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAVCESKDLSDTVRTVLKQEMNRLF 742
+++K++ ++S+ A L+E MI S+ L+D LK E RL
Sbjct: 487 RKEKKYIQEIKSITEINANFEKSVRLNEEMIT--KKVAQYSQQLND-----LKAENARLN 539
Query: 743 GATNPKNFNETFLKRNSDSLPHRLSAA 769
+ N+ L+ +SL L+ A
Sbjct: 540 SKLEKEKHNKERLEAEVESLHSNLATA 566
>gi|7661952 squamous cell carcinoma antigen recognized by T cells 3
[Homo sapiens]
Length = 963
Score = 41.6 bits (96), Expect = 0.003
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 588 SDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKK-KDDDDEEIGGPKEELIPEK 646
++KE ++ ++ +A+++ + EKK +K+K+ R +K+ D+DDE+ G EE P K
Sbjct: 584 AEKEAALVQQEEEKAEQRKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSK 643
Query: 647 LAKVETPLEEA 657
+VE + A
Sbjct: 644 RRRVENSIPAA 654
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 41.6 bits (96), Expect = 0.003
Identities = 22/70 (31%), Positives = 44/70 (62%)
Query: 590 KELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAK 649
+E +KL+ + +RA+++A+ ++E++ KEK++R +++K + + E KEE E+
Sbjct: 355 EEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEA 414
Query: 650 VETPLEEAIK 659
+E LEE K
Sbjct: 415 LEAKLEEKRK 424
Score = 35.4 bits (80), Expect = 0.23
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 575 DENKEHEADTANMSDKE-LKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDE 633
+ ++ E D ++K+ LK+ R K+R+ +A++EE++K E+EK+ R ++K+ +
Sbjct: 385 ERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKK-EEEKRLREEEKRIKAEKA 443
Query: 634 EI----GGPKEELIPEKLA 648
EI PK P+ LA
Sbjct: 444 EITRFFQKPKTPQAPKTLA 462
Score = 32.7 bits (73), Expect = 1.5
Identities = 15/74 (20%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 575 DENKEHEADTANMSDKELKKLRNK--QRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDD 632
+E K+ + + + +KE ++ R K + +A+K+ EE +K ++ + + ++K+K +++
Sbjct: 369 EEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEE 428
Query: 633 EEIGGPKEELIPEK 646
+ + ++ + EK
Sbjct: 429 KRLREEEKRIKAEK 442
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 41.6 bits (96), Expect = 0.003
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 504 ALKKCHEIERHFIEITDDQFDFHTYCMRKITLRSYVDLLK-----LEDVLRQHPFYFKAA 558
A +K H ++ +QF CMR I + +LLK +E +++ A
Sbjct: 1365 AFRKGHVKVVQYLVKEVNQFPSDIECMRYIATITDKELLKKCHQCVETIVKAKDQQAAEA 1424
Query: 559 RIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKE 618
I LK D ++++E A + +E +K + K+++ ++K + EE+++N KE
Sbjct: 1425 NKNASILLKELD---LEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKE 1481
Query: 619 KQQRNQKKKKDDDDEEIGGPKEELIP 644
N + +D+D+EE E+ +P
Sbjct: 1482 ----NSELPEDEDEEENDEDVEQEVP 1503
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 41.6 bits (96), Expect = 0.003
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 504 ALKKCHEIERHFIEITDDQFDFHTYCMRKITLRSYVDLLK-----LEDVLRQHPFYFKAA 558
A +K H ++ +QF CMR I + +LLK +E +++ A
Sbjct: 1365 AFRKGHVKVVQYLVKEVNQFPSDIECMRYIATITDKELLKKCHQCVETIVKAKDQQAAEA 1424
Query: 559 RIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKE 618
I LK D ++++E A + +E +K + K+++ ++K + EE+++N KE
Sbjct: 1425 NKNASILLKELD---LEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKE 1481
Query: 619 KQQRNQKKKKDDDDEEIGGPKEELIP 644
N + +D+D+EE E+ +P
Sbjct: 1482 ----NSELPEDEDEEENDEDVEQEVP 1503
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 41.2 bits (95), Expect = 0.004
Identities = 21/89 (23%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 574 TDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQ---QRNQKKKKDD 630
+D NK+ D+E ++ R ++R +++ + E E++ E+E++ +R + KK+D
Sbjct: 375 SDRNKDRSRSREKSRDRERERERERERERERERERERERER-EREREREREREKDKKRDR 433
Query: 631 DDEEIGGPKEELIPEKLAKVETPLEEAIK 659
+++E + + KL + E +E +K
Sbjct: 434 EEDEEDAYERRKLERKLREKEAAYQERLK 462
Score = 35.4 bits (80), Expect = 0.23
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 573 LTDENKEHEADTANMS--DKELKKLRNK---QRRAQKKAQIEEEKKNAEKEKQQRNQKKK 627
L D KE EAD + +EL+++R + + A+++ ++ AE+ +Q + +++
Sbjct: 522 LRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEP 581
Query: 628 KDDDDEEIGGPKEELIPEKLAKVETP 653
+ +++EE KEE E + + E P
Sbjct: 582 ESEEEEEEKQEKEEKREEPMEEEEEP 607
Score = 34.7 bits (78), Expect = 0.39
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 543 KLEDVLRQHPFYFKAARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRN----- 597
K ED+ R+ P A I + K N + E E D ++ +E+ K R+
Sbjct: 240 KKEDIFRRFPV---APLIPYPLITKEDINAI-----EMEEDKRDLISREISKFRDTHKKL 291
Query: 598 ---KQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDE 633
K ++ +++ +IE+E++ E+E+++ ++++++ + E
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERRERERERE 330
Score = 32.3 bits (72), Expect = 1.9
Identities = 12/60 (20%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
D +K+ E + +KE +++ ++R +++ + E E++ E+E+++ +++K+ + + E
Sbjct: 286 DTHKKLEEEKGK-KEKERQEIEKERRERERERERERERREREREREREREREKEKERERE 344
Score = 31.2 bits (69), Expect = 4.3
Identities = 12/59 (20%), Positives = 33/59 (55%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
+ KE + ++E ++ R ++RR +++ + E ++ EKE+++ ++ + D +E
Sbjct: 298 KEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKE 356
>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
sapiens]
Length = 1483
Score = 40.8 bits (94), Expect = 0.005
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 579 EHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIG 636
EH+ A+MS+++ K+ K+R KK E+ K+ EKE +R +K+K+ +D E G
Sbjct: 530 EHKKRWASMSEEQRKEYLKKKREELKKKLKEKAKERREKEMLERLEKQKRYEDQELTG 587
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 40.8 bits (94), Expect = 0.005
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 578 KEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEK----------KNAEKEKQQRNQKKK 627
+E E +T KE + R K+RR ++K + E EK K E++K++R +KK+
Sbjct: 41 REREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKR 100
Query: 628 KDDDDEEIGGPKEE 641
+ + + + G KE+
Sbjct: 101 RREKENKEGEEKEK 114
Score = 36.2 bits (82), Expect = 0.13
Identities = 14/56 (25%), Positives = 34/56 (60%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDD 631
E K+ E ++E K+ K+R+ +++ + E +K+ KE+++R +++KK ++
Sbjct: 162 ERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEE 217
Score = 35.4 bits (80), Expect = 0.23
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
E KE E KE +K ++ R +KK + E+E++ E++K++R Q +K+++ +E
Sbjct: 129 EGKERER-------KEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKE 180
Score = 35.4 bits (80), Expect = 0.23
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 579 EHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGP 638
E E + KE KK R + R+ +KK + +E++ +KE++++ ++KK+ D +
Sbjct: 173 EKEEERKEKERKERKK-RERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWR 231
Query: 639 KEE 641
++E
Sbjct: 232 EKE 234
Score = 35.0 bits (79), Expect = 0.30
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 590 KELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEK 646
KE K R K+ R +KK + E+E K E EK++R +K+KK+ G + E E+
Sbjct: 84 KEKKGERKKEERERKKRRREKENKEGE-EKEKRKKKEKKERGRTSKEGKERERKEER 139
Score = 35.0 bits (79), Expect = 0.30
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
+E KE E +KE ++ K+R ++ + EEE+K E++++++ ++ +K+ E
Sbjct: 142 EERKERERKKEER-EKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKER 200
Query: 635 IGGPKEELIPEKLAKVETPLE 655
+ E E+ K E E
Sbjct: 201 ERKERRERKKERKKKEERKKE 221
Score = 34.3 bits (77), Expect = 0.51
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 590 KELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAK 649
K+ ++ R K+RR ++ + EE++K +KEK++R + K+ + E KEE E+ +
Sbjct: 91 KKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERER----KEERKREERKE 146
Query: 650 VETPLEEAIK 659
E EE K
Sbjct: 147 RERKKEEREK 156
Score = 33.9 bits (76), Expect = 0.67
Identities = 17/68 (25%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 575 DENKEHEADTANMSDKELKKL-RNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDE 633
++ K+ E + KE K+ R ++R+ +++ + E +K+ EKE++++ +KK+ + +
Sbjct: 113 EKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKR---ERK 169
Query: 634 EIGGPKEE 641
++G +EE
Sbjct: 170 QVGEKEEE 177
Score = 33.9 bits (76), Expect = 0.67
Identities = 12/52 (23%), Positives = 31/52 (59%)
Query: 578 KEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKD 629
KE E +++ ++ K+R+ +++ + E+K K+K++R ++++KD
Sbjct: 174 KEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKD 225
Score = 33.1 bits (74), Expect = 1.1
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 589 DKELKKLRNKQRRA--QKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEK 646
+KE K+ R K+ + +KK + E +K+ EKE ++ +K+K+ +++ G + E+
Sbjct: 74 EKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKER 133
Query: 647 LAKVETPLEE 656
K E EE
Sbjct: 134 ERKEERKREE 143
Score = 32.3 bits (72), Expect = 1.9
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDE 633
+E K E +E +K R ++ R +++ + EK+ KEK+++ +KK++ + E
Sbjct: 137 EERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKE 195
Score = 31.6 bits (70), Expect = 3.3
Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
E KE + N +++ K+ K+RR +KK + ++E++ E++K ++ ++K+ E
Sbjct: 182 ERKERKKRERNRKERK-KERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRE 239
Score = 31.2 bits (69), Expect = 4.3
Identities = 15/62 (24%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 575 DENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEE 634
+E KE E ++ K+ R K+R +++ + ++E+K E+ K++R + ++ + ++E
Sbjct: 176 EERKEKERKERKKRERNRKE-RKKERERKERRERKKERKKKEERKKERQKDRQTNWREKE 234
Query: 635 IG 636
G
Sbjct: 235 RG 236
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 40.4 bits (93), Expect = 0.007
Identities = 27/133 (20%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 543 KLEDVLRQHPFYFKAARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRA 602
K E + RQ ++ E+ K+H+ E +E + + ++E ++ + +
Sbjct: 328 KEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWR 387
Query: 603 QKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEEL--IPEKLAKVETPLEEAIKF 660
Q++ E+E+K E+E+ + Q++K + +E++ +EE+ EK+ + E + E K
Sbjct: 388 QEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKK 447
Query: 661 LTPLKNLVKNKIE 673
+ + ++ + E
Sbjct: 448 IREQEEKIREQEE 460
Score = 34.7 bits (78), Expect = 0.39
Identities = 20/68 (29%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 589 DKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLA 648
++E+++ K RR ++K + E+EKK E+E++ R Q++ + +E++ G +E + E+ A
Sbjct: 424 EEEMQEQEEKMRRQEEKIR-EQEKKIREQEEKIREQEEMMQEQEEKM-GEQEGKMCEQEA 481
Query: 649 KVETPLEE 656
K++ E+
Sbjct: 482 KMQEQEEK 489
Score = 33.1 bits (74), Expect = 1.1
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 585 ANMSDKELKKLRNKQR-RAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEEL- 642
A M ++E K R +++ R Q+K E+E+K E+E+ + Q++K + +E++ +E++
Sbjct: 481 AKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQ 540
Query: 643 -IPEKLAKVETPLEE 656
EK+ + E + E
Sbjct: 541 EQEEKMRRQEEKMRE 555
Score = 30.8 bits (68), Expect = 5.7
Identities = 13/85 (15%), Positives = 48/85 (56%)
Query: 566 LKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQK 625
++ + + ++ ++ M ++E K + + +++A+++E+++ +++++ ++
Sbjct: 441 IREQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQ 500
Query: 626 KKKDDDDEEIGGPKEELIPEKLAKV 650
+KK + EE +EE++ E+ K+
Sbjct: 501 EKKIREQEEKIREQEEMMQEQEEKM 525
Score = 30.8 bits (68), Expect = 5.7
Identities = 14/58 (24%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 589 DKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEK 646
+ ++++ K RR ++K + E+EKK E+E++ R Q++ + +E++ +E++ ++
Sbjct: 480 EAKMQEQEEKMRRQEEKIR-EQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQE 536
>gi|92859701 myosin VI [Homo sapiens]
Length = 1285
Score = 40.4 bits (93), Expect = 0.007
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 576 ENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAE-----KEKQQRNQKKKKDD 630
+ +E EA+ +E++K R ++ +K+ + EEE++ + K KQ+ ++KK++D
Sbjct: 917 KQQEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEMEAKRKQEEEERKKRED 976
Query: 631 DDEEIGGPKEELIPEKLAKVETPLEEAI 658
D++ I E + + K E ++A+
Sbjct: 977 DEKRIQAEVEAQLARQ--KEEESQQQAV 1002
Score = 33.1 bits (74), Expect = 1.1
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 556 KAARIAIEIYL-KLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQ-IEEEKK 613
K I+I+ + K+ +T E + E D S +EL K+++ +++A+ + ++
Sbjct: 872 KNLEISIDTLMAKIKSTMMTQEQIQKEYDALVKSSEELLSALQKKKQQEEEAERLRRIQE 931
Query: 614 NAEKEKQQRNQKKKKDDDDEE 634
EKE+++R + +K+ +EE
Sbjct: 932 EMEKERKRREEDEKRRRKEEE 952
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,317,103
Number of Sequences: 37866
Number of extensions: 1464635
Number of successful extensions: 17505
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 383
Number of HSP's that attempted gapping in prelim test: 10109
Number of HSP's gapped (non-prelim): 4880
length of query: 866
length of database: 18,247,518
effective HSP length: 111
effective length of query: 755
effective length of database: 14,044,392
effective search space: 10603515960
effective search space used: 10603515960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.