Guide to the Human Genome
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Name: UNC119 Sequence: fasta or formatted (220aa) NCBI GI: 16936535
Description:

unc119 (C.elegans) homolog isoform b

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [240aa] unc119 (C.elegans) homolog isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         12           1
 C cysteine            1.4          3           1
 D aspartate           5.5         12           1
 E glutamate           7.3         16           2
 F phenylalanine       6.4         14           1
 G glycine            10.5         23           4
 H histidine           1.4          3           1
 I isoleucine          5.0         11           1
 K lysine              5.0         11           2
 L leucine             5.9         13           2
 M methionine          1.4          3           1
 N asparagine          3.2          7           2
 P proline            10.5         23           2
 Q glutamine           3.6          8           1
 R arginine            7.7         17           2
 S serine              8.6         19           2
 T threonine           3.6          8           1
 V valine              5.5         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   unc119 (C.elegans) homolog isoform b 
UNC119                0.928   unc119 (C.elegans) homolog isoform a 
UNC119B               0.451   unc-119 homolog B 
PDE6D                 0.040   phosphodiesterase 6D 
COL1A1                0.035   alpha 1 type I collagen preproprotein 
BSN                   0.033   bassoon protein 
PDCD7                 0.028   programmed cell death 7 
LOC100291634          0.028   PREDICTED: hypothetical protein XP_002346062 
LOC100291096          0.028   PREDICTED: hypothetical protein XP_002346952 
LOC100287232          0.028   PREDICTED: hypothetical protein XP_002342816 
LOC100287232          0.028   PREDICTED: hypothetical protein 
DIAPH3                0.028   diaphanous homolog 3 isoform b 
DIAPH3                0.028   diaphanous homolog 3 isoform a 
COL6A1                0.028   collagen, type VI, alpha 1 precursor 
CCDC96                0.028   coiled-coil domain containing 96 
HCN2                  0.026   hyperpolarization activated cyclic nucleotide-gated...
BAI1                  0.026   brain-specific angiogenesis inhibitor 1 precursor [...
COL16A1               0.026   alpha 1 type XVI collagen precursor 
EHBP1L1               0.026   tangerin 
FOXA3                 0.026   forkhead box A3 
LOC646509             0.023   PREDICTED: hypothetical protein 
FAM110C               0.023   hypothetical protein LOC642273 
COL25A1               0.023   collagen, type XXV, alpha 1 isoform 1 
COL25A1               0.023   collagen, type XXV, alpha 1 isoform 2 
COL17A1               0.023   alpha 1 type XVII collagen 
SMARCA4               0.023   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.023   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.023   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.023   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.023   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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