PDE6D 29103

Name: PDE6D	Sequence: fasta or formatted (150aa)		NCBI GI: 4505671
Description: phosphodiesterase 6D		Referenced in: Cyclic Nucleotides Ran and Rag Photoreceptors and Related Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 8 2 C cysteine 1.3 2 1 D aspartate 4.0 6 3 E glutamate 10.7 16 2 F phenylalanine 7.3 11 2 G glycine 4.7 7 1 H histidine 0.7 1 1 I isoleucine 4.7 7 2 K lysine 7.3 11 2 L leucine 9.3 14 2 M methionine 3.3 5 2 N asparagine 4.0 6 1 P proline 3.3 5 1 Q glutamine 4.0 6 1 R arginine 6.0 9 1 S serine 7.3 11 2 T threonine 5.3 8 1 V valine 7.3 11 1 W tryptophan 2.7 4 1 Y tyrosine 1.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phosphodiesterase 6D UNC119 0.068 unc119 (C.elegans) homolog isoform a UNC119 0.061 unc119 (C.elegans) homolog isoform b UNC119B 0.054 unc-119 homolog B XPC 0.018 xeroderma pigmentosum, complementation group C isof... RDX 0.007 radixin ARHGEF19 0.007 Rho guanine nucleotide exchange factor (GEF) 19 [Hom... CROP 0.007 cisplatin resistance-associated overexpressed protei... CROP 0.007 cisplatin resistance-associated overexpressed protei... TFAM 0.007 transcription factor A, mitochondrial SCNN1D 0.007 sodium channel, nonvoltage-gated 1, delta isoform 2 ... SCNN1D 0.007 sodium channel, nonvoltage-gated 1, delta isoform 1... KIF17 0.007 kinesin family member 17 isoform b KIF17 0.007 kinesin family member 17 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.