LOC100133673 9258

Name: LOC100133673	Sequence: fasta or formatted (158aa)		NCBI GI: 169218027
Description: PREDICTED: similar to tubulin, gamma 1		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 9 2 C cysteine 1.3 2 1 D aspartate 5.7 9 1 E glutamate 6.3 10 1 F phenylalanine 3.8 6 1 G glycine 3.2 5 1 H histidine 3.2 5 1 I isoleucine 7.0 11 2 K lysine 5.1 8 1 L leucine 7.6 12 2 M methionine 3.8 6 2 N asparagine 3.8 6 1 P proline 4.4 7 1 Q glutamine 7.6 12 2 R arginine 10.1 16 2 S serine 7.6 12 2 T threonine 5.1 8 1 V valine 4.4 7 1 W tryptophan 1.3 2 1 Y tyrosine 3.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to tubulin, gamma 1 TUBG1 1.000 tubulin, gamma 1 TUBG2 0.953 tubulin, gamma 2 TUBB6 0.104 tubulin, beta 6 TUBB3 0.101 tubulin, beta, 4 TUBB2B 0.094 tubulin, beta 2B TUBB2A 0.094 tubulin, beta 2 TUBB1 0.091 beta tubulin 1, class VI TUBB2C 0.091 tubulin, beta, 2 TUBB 0.091 tubulin, beta TUBB8 0.088 tubulin, beta 8 TUBB4 0.088 tubulin, beta 4 TUBAL3 0.081 tubulin, alpha-like 3 TUBA3D 0.071 tubulin, alpha 3d TUBA3C 0.071 tubulin, alpha 3c TUBA1A 0.071 tubulin, alpha 1a TUBA8 0.071 tubulin, alpha 8 TUBA1B 0.067 tubulin, alpha, ubiquitous TUBA4A 0.067 tubulin, alpha 4a TUBA1C 0.067 tubulin alpha 6 TUBB4Q 0.067 tubulin, beta polypeptide 4, member Q TUBA3E 0.067 tubulin, alpha 3e LOC442434 0.040 PREDICTED: similar to hCG1784562 LOC442434 0.040 PREDICTED: similar to hCG1784562 LOC442434 0.040 PREDICTED: similar to hCG1784562 MLL2 0.020 myeloid/lymphoid or mixed-lineage leukemia 2 CDSN 0.017 corneodesmosin precursor USH1C 0.010 harmonin isoform b3 USH1C 0.010 harmonin isoform a UGT1A9 0.010 UDP glycosyltransferase 1 family, polypeptide A9 pre... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.