TUBA1C 4007

Name: TUBA1C	Sequence: fasta or formatted (449aa)		NCBI GI: 14389309
Description: tubulin alpha 6		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 38 2 C cysteine 2.7 12 2 D aspartate 6.5 29 2 E glutamate 7.6 34 2 F phenylalanine 4.5 20 2 G glycine 7.8 35 3 H histidine 2.9 13 1 I isoleucine 5.8 26 2 K lysine 4.2 19 2 L leucine 7.1 32 2 M methionine 2.2 10 1 N asparagine 3.6 16 2 P proline 4.5 20 2 Q glutamine 3.6 16 1 R arginine 4.7 21 2 S serine 4.7 21 2 T threonine 6.9 31 2 V valine 7.3 33 2 W tryptophan 0.9 4 1 Y tyrosine 4.2 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tubulin alpha 6 TUBA1B 0.984 tubulin, alpha, ubiquitous TUBA1A 0.984 tubulin, alpha 1a TUBA3D 0.972 tubulin, alpha 3d TUBA3C 0.972 tubulin, alpha 3c TUBA4A 0.967 tubulin, alpha 4a TUBA3E 0.957 tubulin, alpha 3e TUBA8 0.911 tubulin, alpha 8 TUBAL3 0.758 tubulin, alpha-like 3 TUBB 0.396 tubulin, beta TUBB2C 0.394 tubulin, beta, 2 TUBB2A 0.392 tubulin, beta 2 TUBB6 0.391 tubulin, beta 6 TUBB2B 0.391 tubulin, beta 2B TUBB3 0.391 tubulin, beta, 4 TUBB4 0.390 tubulin, beta 4 TUBB8 0.384 tubulin, beta 8 TUBB1 0.362 beta tubulin 1, class VI TUBB4Q 0.333 tubulin, beta polypeptide 4, member Q TUBG1 0.235 tubulin, gamma 1 TUBG2 0.233 tubulin, gamma 2 TUBE1 0.231 tubulin, epsilon 1 LOC100130736 0.123 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.123 PREDICTED: similar to tubulin, beta 5 TUBD1 0.097 delta-tubulin LOC100130736 0.049 PREDICTED: similar to hCG1647990 LOC442434 0.048 PREDICTED: similar to hCG1784562 LOC442434 0.048 PREDICTED: similar to hCG1784562 LOC442434 0.048 PREDICTED: similar to hCG1784562 LOC100292044 0.023 PREDICTED: similar to hCG1642465 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.