LOC442434 8093

Name: LOC442434	Sequence: fasta or formatted (316aa)		NCBI GI: 169178090
Description: PREDICTED: similar to hCG1784562		Referenced in: Tubulins and Microtubules
Other entries for this name: alt mRNA [316aa] PREDICTED: similar to hCG1784562 alt mRNA [316aa] PREDICTED: similar to hCG1784562
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 26 2 C cysteine 3.5 11 1 D aspartate 3.2 10 1 E glutamate 7.0 22 2 F phenylalanine 5.1 16 2 G glycine 7.6 24 2 H histidine 2.8 9 1 I isoleucine 4.1 13 1 K lysine 5.4 17 2 L leucine 7.6 24 2 M methionine 3.5 11 1 N asparagine 4.4 14 2 P proline 4.7 15 3 Q glutamine 4.7 15 1 R arginine 5.1 16 1 S serine 7.6 24 2 T threonine 4.1 13 1 V valine 5.4 17 1 W tryptophan 2.5 8 1 Y tyrosine 3.5 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1784562 LOC442434 1.000 PREDICTED: similar to hCG1784562 LOC442434 1.000 PREDICTED: similar to hCG1784562 TUBB8 0.263 tubulin, beta 8 TUBB2C 0.257 tubulin, beta, 2 TUBB2B 0.257 tubulin, beta 2B TUBB2A 0.257 tubulin, beta 2 TUBB 0.255 tubulin, beta TUBB4Q 0.252 tubulin, beta polypeptide 4, member Q TUBB4 0.249 tubulin, beta 4 TUBB3 0.248 tubulin, beta, 4 TUBB6 0.240 tubulin, beta 6 TUBB1 0.191 beta tubulin 1, class VI LOC100130736 0.121 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.121 PREDICTED: similar to tubulin, beta 5 LOC100292044 0.096 PREDICTED: similar to hCG1642465 TUBA1B 0.071 tubulin, alpha, ubiquitous TUBA4A 0.069 tubulin, alpha 4a TUBA1A 0.069 tubulin, alpha 1a TUBA3D 0.067 tubulin, alpha 3d TUBA3C 0.067 tubulin, alpha 3c TUBA1C 0.067 tubulin alpha 6 TUBA8 0.064 tubulin, alpha 8 TUBA3E 0.063 tubulin, alpha 3e LOC100130736 0.061 PREDICTED: similar to hCG1647990 TUBAL3 0.061 tubulin, alpha-like 3 TUBE1 0.053 tubulin, epsilon 1 TUBG2 0.020 tubulin, gamma 2 TUBG1 0.019 tubulin, gamma 1 LOC100133673 0.019 PREDICTED: similar to tubulin, gamma 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.