TUBA1A 9688

Name: TUBA1A	Sequence: fasta or formatted (451aa)		NCBI GI: 17986283
Description: tubulin, alpha 1a		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 36 2 C cysteine 2.7 12 2 D aspartate 6.0 27 2 E glutamate 8.2 37 3 F phenylalanine 4.4 20 2 G glycine 8.2 37 3 H histidine 2.9 13 1 I isoleucine 6.0 27 2 K lysine 4.2 19 2 L leucine 7.1 32 2 M methionine 2.2 10 1 N asparagine 3.5 16 2 P proline 4.4 20 2 Q glutamine 3.5 16 1 R arginine 4.7 21 2 S serine 4.7 21 2 T threonine 6.7 30 2 V valine 7.5 34 2 W tryptophan 0.9 4 1 Y tyrosine 4.2 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tubulin, alpha 1a TUBA1B 0.996 tubulin, alpha, ubiquitous TUBA1C 0.980 tubulin alpha 6 TUBA3D 0.978 tubulin, alpha 3d TUBA3C 0.978 tubulin, alpha 3c TUBA3E 0.962 tubulin, alpha 3e TUBA4A 0.958 tubulin, alpha 4a TUBA8 0.902 tubulin, alpha 8 TUBAL3 0.756 tubulin, alpha-like 3 TUBB2C 0.391 tubulin, beta, 2 TUBB4 0.391 tubulin, beta 4 TUBB 0.391 tubulin, beta TUBB2A 0.387 tubulin, beta 2 TUBB6 0.387 tubulin, beta 6 TUBB2B 0.387 tubulin, beta 2B TUBB3 0.385 tubulin, beta, 4 TUBB8 0.377 tubulin, beta 8 TUBB1 0.362 beta tubulin 1, class VI TUBB4Q 0.330 tubulin, beta polypeptide 4, member Q TUBG1 0.232 tubulin, gamma 1 TUBG2 0.229 tubulin, gamma 2 TUBE1 0.228 tubulin, epsilon 1 LOC100130736 0.119 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.119 PREDICTED: similar to tubulin, beta 5 TUBD1 0.094 delta-tubulin LOC442434 0.049 PREDICTED: similar to hCG1784562 LOC442434 0.049 PREDICTED: similar to hCG1784562 LOC442434 0.049 PREDICTED: similar to hCG1784562 LOC100130736 0.047 PREDICTED: similar to hCG1647990 LOC100292044 0.023 PREDICTED: similar to hCG1642465 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.