TUBA3D 5978

Name: TUBA3D	Sequence: fasta or formatted (450aa)		NCBI GI: 156564363
Description: tubulin, alpha 3d		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 40 2 C cysteine 2.7 12 2 D aspartate 6.0 27 2 E glutamate 8.0 36 2 F phenylalanine 4.4 20 2 G glycine 7.8 35 3 H histidine 2.9 13 1 I isoleucine 5.8 26 1 K lysine 4.2 19 2 L leucine 7.3 33 2 M methionine 2.2 10 1 N asparagine 3.6 16 2 P proline 4.4 20 2 Q glutamine 3.3 15 1 R arginine 4.7 21 2 S serine 4.4 20 2 T threonine 6.4 29 2 V valine 7.8 35 2 W tryptophan 0.9 4 1 Y tyrosine 4.2 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tubulin, alpha 3d TUBA3C 1.000 tubulin, alpha 3c TUBA3E 0.984 tubulin, alpha 3e TUBA1A 0.982 tubulin, alpha 1a TUBA1B 0.978 tubulin, alpha, ubiquitous TUBA1C 0.972 tubulin alpha 6 TUBA4A 0.952 tubulin, alpha 4a TUBA8 0.910 tubulin, alpha 8 TUBAL3 0.753 tubulin, alpha-like 3 TUBB 0.392 tubulin, beta TUBB2C 0.388 tubulin, beta, 2 TUBB4 0.387 tubulin, beta 4 TUBB6 0.386 tubulin, beta 6 TUBB2A 0.386 tubulin, beta 2 TUBB2B 0.385 tubulin, beta 2B TUBB3 0.384 tubulin, beta, 4 TUBB8 0.379 tubulin, beta 8 TUBB1 0.363 beta tubulin 1, class VI TUBB4Q 0.326 tubulin, beta polypeptide 4, member Q TUBG1 0.232 tubulin, gamma 1 TUBG2 0.230 tubulin, gamma 2 TUBE1 0.229 tubulin, epsilon 1 LOC100130736 0.117 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.117 PREDICTED: similar to tubulin, beta 5 TUBD1 0.098 delta-tubulin LOC442434 0.048 PREDICTED: similar to hCG1784562 LOC442434 0.048 PREDICTED: similar to hCG1784562 LOC442434 0.048 PREDICTED: similar to hCG1784562 LOC100130736 0.046 PREDICTED: similar to hCG1647990 LOC100133673 0.023 PREDICTED: similar to tubulin, gamma 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.