TUBA1B 33255

Name: TUBA1B	Sequence: fasta or formatted (451aa)		NCBI GI: 57013276
Description: tubulin, alpha, ubiquitous		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 36 2 C cysteine 2.7 12 2 D aspartate 6.0 27 2 E glutamate 8.2 37 3 F phenylalanine 4.4 20 2 G glycine 8.0 36 3 H histidine 2.9 13 1 I isoleucine 6.0 27 2 K lysine 4.2 19 2 L leucine 7.1 32 2 M methionine 2.2 10 1 N asparagine 3.5 16 2 P proline 4.4 20 2 Q glutamine 3.5 16 1 R arginine 4.7 21 2 S serine 5.1 23 2 T threonine 6.4 29 2 V valine 7.5 34 2 W tryptophan 0.9 4 1 Y tyrosine 4.2 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tubulin, alpha, ubiquitous TUBA1A 0.997 tubulin, alpha 1a TUBA1C 0.981 tubulin alpha 6 TUBA3D 0.974 tubulin, alpha 3d TUBA3C 0.974 tubulin, alpha 3c TUBA4A 0.962 tubulin, alpha 4a TUBA3E 0.959 tubulin, alpha 3e TUBA8 0.903 tubulin, alpha 8 TUBAL3 0.758 tubulin, alpha-like 3 TUBB2C 0.394 tubulin, beta, 2 TUBB4 0.394 tubulin, beta 4 TUBB 0.394 tubulin, beta TUBB2A 0.391 tubulin, beta 2 TUBB6 0.391 tubulin, beta 6 TUBB2B 0.390 tubulin, beta 2B TUBB3 0.389 tubulin, beta, 4 TUBB8 0.381 tubulin, beta 8 TUBB1 0.364 beta tubulin 1, class VI TUBB4Q 0.332 tubulin, beta polypeptide 4, member Q TUBG1 0.233 tubulin, gamma 1 TUBG2 0.231 tubulin, gamma 2 TUBE1 0.230 tubulin, epsilon 1 LOC100130736 0.121 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.121 PREDICTED: similar to tubulin, beta 5 TUBD1 0.097 delta-tubulin LOC442434 0.050 PREDICTED: similar to hCG1784562 LOC442434 0.050 PREDICTED: similar to hCG1784562 LOC442434 0.050 PREDICTED: similar to hCG1784562 LOC100130736 0.047 PREDICTED: similar to hCG1647990 LOC100292044 0.023 PREDICTED: similar to hCG1642465 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.