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Search of human proteins with 169218002
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
(218 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169218002 PREDICTED: hypothetical protein [Homo sapiens] 467 e-132
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens] 459 e-130
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens] 458 e-129
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] 444 e-125
gi|169177385 PREDICTED: hypothetical protein [Homo sapiens] 150 8e-37
gi|169177307 PREDICTED: hypothetical protein [Homo sapiens] 150 8e-37
gi|54860079 nadrin isoform 1 [Homo sapiens] 47 1e-05
gi|54860105 nadrin isoform 2 [Homo sapiens] 47 1e-05
gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo ... 47 2e-05
gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo ... 47 2e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 45 4e-05
gi|55750053 atrophin-1 [Homo sapiens] 44 1e-04
gi|55750041 atrophin-1 [Homo sapiens] 44 1e-04
gi|41281612 zinc finger protein 828 [Homo sapiens] 44 1e-04
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 44 1e-04
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 1e-04
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 1e-04
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 1e-04
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 44 1e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 43 2e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 43 2e-04
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 43 2e-04
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo ... 43 2e-04
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 2e-04
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|21687188 hypothetical protein LOC146325 [Homo sapiens] 42 3e-04
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 42 3e-04
>gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
Length = 218
Score = 467 bits (1201), Expect = e-132
Identities = 218/218 (100%), Positives = 218/218 (100%)
Query: 1 MSNGGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP 60
MSNGGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP
Sbjct: 1 MSNGGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP 60
Query: 61 EPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLR 120
EPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLR
Sbjct: 61 EPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLR 120
Query: 121 WRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLG 180
WRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLG
Sbjct: 121 WRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLG 180
Query: 181 TRARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 218
TRARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP
Sbjct: 181 TRARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 218
>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 459 bits (1181), Expect = e-130
Identities = 214/217 (98%), Positives = 215/217 (99%)
Query: 2 SNGGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 61
+ GAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE
Sbjct: 29 ARAGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 88
Query: 62 PARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW 121
PARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW
Sbjct: 89 PARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW 148
Query: 122 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 181
RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT
Sbjct: 149 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 208
Query: 182 RARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 218
RARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP
Sbjct: 209 RARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 245
>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 458 bits (1178), Expect = e-129
Identities = 213/217 (98%), Positives = 215/217 (99%)
Query: 2 SNGGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 61
+ GAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE
Sbjct: 29 ARAGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 88
Query: 62 PARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW 121
PAR+PSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW
Sbjct: 89 PARSPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW 148
Query: 122 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 181
RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT
Sbjct: 149 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 208
Query: 182 RARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 218
RARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP
Sbjct: 209 RARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 245
>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 292
Score = 444 bits (1143), Expect = e-125
Identities = 207/217 (95%), Positives = 209/217 (96%)
Query: 2 SNGGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 61
+ GAGAGR PAARQVAPPGGP SLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE
Sbjct: 9 AGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 68
Query: 62 PARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW 121
PARAPSIAEPGPGIPVAA KP +LPGGGGCTGARTENPPLSPTRGDCRVPVPAA ISLRW
Sbjct: 69 PARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRW 128
Query: 122 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 181
RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT
Sbjct: 129 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 188
Query: 182 RARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVEDP 218
RARCPCGCGEARRSALQQLHGGGNRPSAPS VAVEDP
Sbjct: 189 RARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDP 225
Score = 31.6 bits (70), Expect = 0.55
Identities = 51/182 (28%), Positives = 63/182 (34%), Gaps = 24/182 (13%)
Query: 6 AGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARA 65
+G P Q G P + H + P AP PS R G+S A P
Sbjct: 130 SGREARPGGPQAGRAGDPKADQAMHLQ--PAWAPKLQPPSVCRQQPPGNS-RARPHSPHL 186
Query: 66 PSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGR 125
+ A G A + GGG N P +P+R P S R GR
Sbjct: 187 GTRARCPCGCGEARRSALQQLHGGG-------NRPSAPSRVAVEDPWLEVSSSGRGGPGR 239
Query: 126 EARPGGPQAGRAGDPKADQAM--HLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRA 183
G QA DP+A QAM HL + Q PGN +A + T A
Sbjct: 240 GQGLAGSQARGTRDPEAAQAMLHHLG------------AQLQAPGNFQAGWRAQPRRTGA 287
Query: 184 RC 185
RC
Sbjct: 288 RC 289
>gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 150 bits (379), Expect = 8e-37
Identities = 67/73 (91%), Positives = 68/73 (93%)
Query: 146 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 205
MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
Query: 206 RPSAPSPVAVEDP 218
RPSA SPVA E P
Sbjct: 61 RPSALSPVAAEGP 73
Score = 48.9 bits (115), Expect = 3e-06
Identities = 50/158 (31%), Positives = 63/158 (39%), Gaps = 34/158 (21%)
Query: 4 GGAGAGRSPA---ARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP 60
GGAG G+ A AR P ++ T + PS R ATP
Sbjct: 83 GGAGRGQGLAGSQARSTCDPEAAQAMLTTWA------------PSYRRQ--------ATP 122
Query: 61 EPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPP----------LSPTRGDCRV 110
+ A APS+A+PG + VAA KP L GGGCTGA T+ P +PT R
Sbjct: 123 KLAGAPSLADPGLDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRRR 181
Query: 111 PVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHL 148
V R G A G G+P + Q + L
Sbjct: 182 GVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFL 219
>gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 150 bits (379), Expect = 8e-37
Identities = 67/73 (91%), Positives = 68/73 (93%)
Query: 146 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 205
MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
Query: 206 RPSAPSPVAVEDP 218
RPSA SPVA E P
Sbjct: 61 RPSALSPVAAEGP 73
Score = 47.0 bits (110), Expect = 1e-05
Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 58 ATPEPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQI 117
ATP+ A APS+A+PG + VAA KP L GGGCTGA T+ P R AA
Sbjct: 120 ATPKLAGAPSLADPGMDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRW---LRTAPGAAPT 175
Query: 118 SLRWRSG 124
SLR R G
Sbjct: 176 SLRRRRG 182
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 47.0 bits (110), Expect = 1e-05
Identities = 51/229 (22%), Positives = 75/229 (32%), Gaps = 22/229 (9%)
Query: 4 GGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPA 63
G G S Q P P R+ S PPG+PS L A ++ P
Sbjct: 649 GHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPI 708
Query: 64 RAPSIAEPGPGIPVAAI-----------KPVILPGGGGC-----TGARTENPPLSPTRGD 107
+AP+ P P + P+ LP G T +T PP +P G
Sbjct: 709 QAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGK 768
Query: 108 CRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPP 167
+PA Q +G P AG P+ +P+ P QPP V
Sbjct: 769 QNPSLPAPQT----LAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDS 824
Query: 168 GNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVE 216
+ P + + T + E RS ++H P + ++
Sbjct: 825 SLTNTAPTASKIVTDSN--SRVSEPHRSIFPEMHSDSASKDVPGRILLD 871
Score = 39.7 bits (91), Expect = 0.002
Identities = 56/215 (26%), Positives = 74/215 (34%), Gaps = 32/215 (14%)
Query: 3 NGGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPL-CAGSSCLATPE 61
+G + P + V PG +S + + P A + S +P AG S
Sbjct: 573 DGSPPKPKDPVSAAVPAPGRNNSQIAS-GQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRR 631
Query: 62 PARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRW 121
+ P+ A P PG P P PGG +G P LSP + R P P Q
Sbjct: 632 AVKKPAPAPPKPGNP-----PPGHPGGQSSSGTSQHPPSLSP-KPPTRSPSPPTQ----- 680
Query: 122 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT 181
+G+ PG P A + L P AP PP QPP + H+
Sbjct: 681 HTGQP--PGQPSAPSQLSAPRRYSSSLSPIQAPNHPPP-----QPPTQATPLMHTK---- 729
Query: 182 RARCPCGCGEARRSALQQLHG----GGNRPSAPSP 212
P G AL HG P P+P
Sbjct: 730 ----PNSQGPPNPMALPSEHGLEQPSHTPPQTPTP 760
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 47.0 bits (110), Expect = 1e-05
Identities = 51/229 (22%), Positives = 75/229 (32%), Gaps = 22/229 (9%)
Query: 4 GGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPA 63
G G S Q P P R+ S PPG+PS L A ++ P
Sbjct: 571 GHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPI 630
Query: 64 RAPSIAEPGPGIPVAAI-----------KPVILPGGGGC-----TGARTENPPLSPTRGD 107
+AP+ P P + P+ LP G T +T PP +P G
Sbjct: 631 QAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGK 690
Query: 108 CRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPP 167
+PA Q +G P AG P+ +P+ P QPP V
Sbjct: 691 QNPSLPAPQT----LAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDS 746
Query: 168 GNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSPVAVE 216
+ P + + T + E RS ++H P + ++
Sbjct: 747 SLTNTAPTASKIVTDSN--SRVSEPHRSIFPEMHSDSASKDVPGRILLD 793
Score = 39.3 bits (90), Expect = 0.003
Identities = 55/208 (26%), Positives = 72/208 (34%), Gaps = 32/208 (15%)
Query: 10 RSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPL-CAGSSCLATPEPARAPSI 68
+ P + V PG +S + + P A + S +P AG S + P+
Sbjct: 502 KDPVSAAVPAPGRNNSQIAS-GQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAP 560
Query: 69 AEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREAR 128
A P PG P P PGG +G P LSP + R P P Q +G+
Sbjct: 561 APPKPGNP-----PPGHPGGQSSSGTSQHPPSLSP-KPPTRSPSPPTQ-----HTGQP-- 607
Query: 129 PGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCG 188
PG P A + L P AP PP QPP + H+ P
Sbjct: 608 PGQPSAPSQLSAPRRYSSSLSPIQAPNHPPP-----QPPTQATPLMHTK--------PNS 654
Query: 189 CGEARRSALQQLHG----GGNRPSAPSP 212
G AL HG P P+P
Sbjct: 655 QGPPNPMALPSEHGLEQPSHTPPQTPTP 682
>gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo
sapiens]
Length = 258
Score = 46.6 bits (109), Expect = 2e-05
Identities = 49/154 (31%), Positives = 63/154 (40%), Gaps = 39/154 (25%)
Query: 59 TPEPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAA--- 115
+P+P+ + S + G G PVA + PG G+ PP P GD + P P+A
Sbjct: 80 SPQPSSSGSSSSRGGGAPVARPE----PGRAASPGSMVPGPPAPPPSGD-QQPAPSAGSG 134
Query: 116 ------------QISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCR 163
Q+ L GR G GRAG+ +A A P+ AP+ P C
Sbjct: 135 STADLPEWPWPLQLLLLLAPGR-----GCARGRAGEGRAQCAG--SPSTAPR---PRTC- 183
Query: 164 QQPPGNSRARPHSP-----HLGTRARCPCGCGEA 192
PG RA PH P H G CP CG A
Sbjct: 184 -SSPG--RATPHRPAGQPSHPGGAGCCPRVCGPA 214
>gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo
sapiens]
Length = 258
Score = 46.6 bits (109), Expect = 2e-05
Identities = 49/154 (31%), Positives = 63/154 (40%), Gaps = 39/154 (25%)
Query: 59 TPEPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAA--- 115
+P+P+ + S + G G PVA + PG G+ PP P GD + P P+A
Sbjct: 80 SPQPSSSGSSSSRGGGAPVARPE----PGRAASPGSMVPGPPAPPPSGD-QQPAPSAGSG 134
Query: 116 ------------QISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCR 163
Q+ L GR G GRAG+ +A A P+ AP+ P C
Sbjct: 135 STADLPEWPWPLQLLLLLAPGR-----GCARGRAGEGRAQCAG--SPSTAPR---PRTC- 183
Query: 164 QQPPGNSRARPHSP-----HLGTRARCPCGCGEA 192
PG RA PH P H G CP CG A
Sbjct: 184 -SSPG--RATPHRPAGQPSHPGGAGCCPRVCGPA 214
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 45.4 bits (106), Expect = 4e-05
Identities = 57/222 (25%), Positives = 74/222 (33%), Gaps = 14/222 (6%)
Query: 7 GAGRSPAARQVAPPGGPSSLARTHSRRHPDHAP--PPGRPSCSRPLCAGSSCLATPEPAR 64
GA +PAA +P GGP++ + + P P P G P+ P A ATP +
Sbjct: 1055 GAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK 1114
Query: 65 APSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSG 124
P G P P G G T P +PT P P ++ G
Sbjct: 1115 GGLATPPHKGAPTTPAATPPSPKG----GLATPPPKGAPTTPAATPPSPKGGLATPPPKG 1170
Query: 125 R----EARPGGPQAGRA-GDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHL 179
A P P+ G A PK +PK + + P A P SP
Sbjct: 1171 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230
Query: 180 GTRARCPCGCGEARRSALQQLHGGGNRP---SAPSPVAVEDP 218
G P G + GG P AP+P A P
Sbjct: 1231 GLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP 1272
Score = 44.7 bits (104), Expect = 6e-05
Identities = 56/222 (25%), Positives = 75/222 (33%), Gaps = 14/222 (6%)
Query: 7 GAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAG--SSCLATPEPAR 64
GA PAA +P GGP++ + + P PP + + P G ++ ATP +
Sbjct: 1078 GAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Query: 65 APSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSG 124
P G P P G G T P +PT P P ++ G
Sbjct: 1138 GGLATPPPKGAPTTPAATPPSPKG----GLATPPPKGAPTTPAATPPSPKGGLATPSPKG 1193
Query: 125 R----EARPGGPQAGRA-GDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHL 179
A P P+ G A PK +PK + + P A P SP
Sbjct: 1194 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1253
Query: 180 GTRARCPCGCGEARRSALQQLHGGGNRP---SAPSPVAVEDP 218
G P G + L GG P AP+P V P
Sbjct: 1254 GPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPP 1295
Score = 43.9 bits (102), Expect = 1e-04
Identities = 45/172 (26%), Positives = 59/172 (34%), Gaps = 9/172 (5%)
Query: 7 GAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGR---PSCSRPLCAGSSCLATPEPA 63
GA PA +P G P+ A T S + P P + P G + P P
Sbjct: 1331 GAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPK 1390
Query: 64 RAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRS 123
R P+I P G P + + P T T +P++GD P +SL+
Sbjct: 1391 RGPAIPSP-KGDPTSPAVIPLSPKKAPATPV-TREGAATPSKGDL-TPPAVTPVSLKKAP 1447
Query: 124 GREARPGGPQA-GRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARP 174
A GGP GDP P P P V P + A P
Sbjct: 1448 ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPP--APKQVATSSSPKKAPATP 1497
Score = 42.0 bits (97), Expect = 4e-04
Identities = 52/205 (25%), Positives = 67/205 (32%), Gaps = 34/205 (16%)
Query: 7 GAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPP--------------PGRPSCSRPLCA 52
GA PAA +P GGP++ + + P PP P P+ + P
Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK 997
Query: 53 GSSCLATPEPARA---PSIAEPGP-GIPV-------AAIKPVILPGGGGCTGARTENPPL 101
G ATP P A P++ P P G P A+ P P + A T P
Sbjct: 998 GGP--ATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKG 1055
Query: 102 SPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSV 161
+PT +P P + G P G P P AP PP+
Sbjct: 1056 APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP-----SPKGAP--MPPAA 1108
Query: 162 CRQQPPGNSRARPHSPHLGTRARCP 186
P G PH T A P
Sbjct: 1109 TPPSPKGGLATPPHKGAPTTPAATP 1133
Score = 41.6 bits (96), Expect = 5e-04
Identities = 55/208 (26%), Positives = 70/208 (33%), Gaps = 36/208 (17%)
Query: 7 GAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPP--GRPSCSRPLCAGSSCLATPEPAR 64
GA +PAA +P GG ++ + + P PP G P+ P A + ATP +
Sbjct: 1216 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLK 1275
Query: 65 APSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSG 124
P G P A+ P GG P SP +G P P A
Sbjct: 1276 GGLATPPHKGAPNPAVVTPPSPKGG---------PATSPPKG---APTPPA--------- 1314
Query: 125 REARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRAR 184
A P P+ G G P P AP PP+V P G +P
Sbjct: 1315 --ATPPSPK-GSPGTP--------PPKGAP--TPPAVTPPSPKGTPTLPATTPSSKGGPT 1361
Query: 185 CPCGCGEARRSALQQLHGGGNRPSAPSP 212
P A H GG + PSP
Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPAMTPPSP 1389
Score = 36.6 bits (83), Expect = 0.017
Identities = 53/214 (24%), Positives = 65/214 (30%), Gaps = 31/214 (14%)
Query: 23 PSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEP-GPGIPVAAIK 81
PS + + P P P+ S + ATP P P+ P G P AA
Sbjct: 888 PSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATP 947
Query: 82 PVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPK 141
P P G G T +P +PT P P + G P G P
Sbjct: 948 P--SPKG----GPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPA 1001
Query: 142 ADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGT--------------RARCPC 187
P AP PP+V P G+ A P T P
Sbjct: 1002 TP-----SPKGAP--TPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPK 1054
Query: 188 GCGEARRSALQQLHGGGNRPS---APSPVAVEDP 218
G + L GG PS AP+P A P
Sbjct: 1055 GAPTTPAATLPSPKGGPATPSLKGAPTPPAATPP 1088
Score = 27.7 bits (60), Expect = 7.9
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 29 THSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGI-------PVAAIK 81
+HS + P APP + S PL A + P+P A A P P + PV +
Sbjct: 1755 SHSPKGP-LAPPESK--ASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLP 1811
Query: 82 P--VILPGGGGCTGARTENPPLSPTRGDCRVP-VPAAQIS 118
P LP G + + PL+P D +P +P IS
Sbjct: 1812 PKQQFLPSSPGLV-LESPSKPLAPADEDELLPLIPPEPIS 1850
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 43.9 bits (102), Expect = 1e-04
Identities = 51/190 (26%), Positives = 69/190 (36%), Gaps = 33/190 (17%)
Query: 11 SPAARQVAP-PGGPSSLARTHSRRHPDHAPPPGRP-----SCSRPLCAGSSCLATPEPAR 64
SP+ + P P GP+ L HS+ A P G P + S GS + P P++
Sbjct: 533 SPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQ 592
Query: 65 APSIAE-PGPGIPV-----AAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQIS 118
P A P P +P A + VI G +T +PP P G R P P A
Sbjct: 593 GPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGK-RAPSPGA--- 648
Query: 119 LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH 178
+ + +PG P + R G P P P G +P SP
Sbjct: 649 YKTATPPGYKPGSPPSFRTGTP-----------------PGYRGTSPPAGPGTFKPGSPT 691
Query: 179 LGTRARCPCG 188
+G P G
Sbjct: 692 VGPGPLPPAG 701
Score = 29.3 bits (64), Expect = 2.7
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 18/59 (30%)
Query: 19 PPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCA------GSSCLATPE----PARAPS 67
PP GPS L P PPP P+ PL A + TPE PAR+PS
Sbjct: 698 PPAGPSGL--------PSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPS 748
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 43.9 bits (102), Expect = 1e-04
Identities = 51/190 (26%), Positives = 69/190 (36%), Gaps = 33/190 (17%)
Query: 11 SPAARQVAP-PGGPSSLARTHSRRHPDHAPPPGRP-----SCSRPLCAGSSCLATPEPAR 64
SP+ + P P GP+ L HS+ A P G P + S GS + P P++
Sbjct: 533 SPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQ 592
Query: 65 APSIAE-PGPGIPV-----AAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQIS 118
P A P P +P A + VI G +T +PP P G R P P A
Sbjct: 593 GPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGK-RAPSPGA--- 648
Query: 119 LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPH 178
+ + +PG P + R G P P P G +P SP
Sbjct: 649 YKTATPPGYKPGSPPSFRTGTP-----------------PGYRGTSPPAGPGTFKPGSPT 691
Query: 179 LGTRARCPCG 188
+G P G
Sbjct: 692 VGPGPLPPAG 701
Score = 29.3 bits (64), Expect = 2.7
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 18/59 (30%)
Query: 19 PPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCA------GSSCLATPE----PARAPS 67
PP GPS L P PPP P+ PL A + TPE PAR+PS
Sbjct: 698 PPAGPSGL--------PSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPS 748
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 43.9 bits (102), Expect = 1e-04
Identities = 57/212 (26%), Positives = 80/212 (37%), Gaps = 35/212 (16%)
Query: 6 AGAGRSPAARQVAPPGGPSSLARTHSRRHP-DHAPPPGRPSCS------RPLCAGSSCLA 58
A + SP P GPS A SR+ +P P +PS S +P A S
Sbjct: 242 ASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPR 301
Query: 59 TPEPARAPSIAEPGP--------GIPVAAIKP--VILPGGGGCTGARTENPPLSPTRGDC 108
P PA +P +PGP P A+ P P G P +SP G
Sbjct: 302 RPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSP--GPW 359
Query: 109 RVPVPAAQISLRWRSGR------EARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVC 162
+ P P+ S W+S ++ P P++ ++G P+ + AP L P
Sbjct: 360 K-PTPSVS-SASWKSSSVSPSSWKSPPASPESWKSGPPELRKT-------APTLSPEH-W 409
Query: 163 RQQPPGNSRARPHSPHLGTRARCPCGCGEARR 194
+ PP + R P L R P G E R+
Sbjct: 410 KAVPPVSPELRKPGPPLSPEIRSPAGSPELRK 441
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 43.5 bits (101), Expect = 1e-04
Identities = 50/177 (28%), Positives = 62/177 (35%), Gaps = 31/177 (17%)
Query: 4 GGAGAGRSPAARQVA--PPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPE 61
GG G SP A PP P + + P APPPG P + P + PE
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPG-PGPAPPQHPPRAEALPPE 64
Query: 62 PA---------RAPSIAEPGPGIPVAAIKPVILPGGG------GCTGARTENPPLSPT-- 104
A R+ + PG P AA P G C+ A E P P
Sbjct: 65 AADEGGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGPKVS 124
Query: 105 ---RGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQP 158
RG P P G G +AG AG+P+ QA +Q + LQP
Sbjct: 125 FSCRGAASGPAPGP--------GPAEEAGSEEAGPAGEPRGSQASFMQRQFGALLQP 173
Score = 42.0 bits (97), Expect = 4e-04
Identities = 48/171 (28%), Positives = 56/171 (32%), Gaps = 22/171 (12%)
Query: 19 PPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLAT-PEPARAPSIAEPG----- 72
PP S++A P RP PL GS L P P AP+ A PG
Sbjct: 720 PPQVTSAIATLQQAAAMSFCPQVARPLVG-PLALGSPRLVRRPPPGPAPAAASPGPPPPA 778
Query: 73 --PGIPVAAIKPVILPGGGGCTGARTENP------------PLSPTRGDCRVPVPAAQIS 118
PG P + P P GG A P PLS ++ P S
Sbjct: 779 SPPGAPASPRAPRTSP-YGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGAPGPAAS 837
Query: 119 LRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGN 169
R S R G A RA P D+ P A L P R + N
Sbjct: 838 TRPASSSTPRLGPTPAARAAAPSPDRRDSASPGAAGGLDPQDSARSRLSSN 888
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 43.5 bits (101), Expect = 1e-04
Identities = 43/140 (30%), Positives = 54/140 (38%), Gaps = 18/140 (12%)
Query: 33 RHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIA----EPGPGIPVAAIKPVILP-- 86
RH PPP P+ P + P PARAP IA + P +PV P LP
Sbjct: 173 RHISTEPPPPPPAA--PATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQ 230
Query: 87 --GGGGCTGARTENPPLSPTRGDC--RVPVPAAQ-ISLRWRSGREARPGGPQAGRAGDPK 141
GG TG +P + + R P P AQ R R+G E P GR G
Sbjct: 231 LRAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCE-----PSCGRLGRGY 285
Query: 142 ADQAMHLQPAWAPKLQPPSV 161
+ P AP P++
Sbjct: 286 QQRLPSRSPHAAPAAPAPAL 305
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.5 bits (101), Expect = 1e-04
Identities = 63/227 (27%), Positives = 78/227 (34%), Gaps = 34/227 (14%)
Query: 5 GAGAGRSPAARQVAPPGGP---SSLA--RTHSRRHPDHAPPPGR---PSCSRPLCAGSSC 56
G G P APP GP SS+A T+ + APPPG P+ S P S
Sbjct: 383 GNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISH 442
Query: 57 LATPEPARA------PSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRV 110
+ EP S +PG G+P A P+ PG G G + P +PTR
Sbjct: 443 QSV-EPVVMMHMNIQDSGTQPG-GVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIAR 500
Query: 111 PVPAAQISLRWRSGREARPGGPQA-----GRAGDPKADQAMHLQPAWAPKLQPPSVCRQQ 165
P P R + PGGP G A A + L P + Q
Sbjct: 501 PTPP--------QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG 552
Query: 166 PPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
PG A P +P A G +A G P P P
Sbjct: 553 TPG--MAPPPAP---ATASASAGTTNTATTAGPAPGGPAQPPPTPQP 594
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.5 bits (101), Expect = 1e-04
Identities = 63/227 (27%), Positives = 78/227 (34%), Gaps = 34/227 (14%)
Query: 5 GAGAGRSPAARQVAPPGGP---SSLA--RTHSRRHPDHAPPPGR---PSCSRPLCAGSSC 56
G G P APP GP SS+A T+ + APPPG P+ S P S
Sbjct: 383 GNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISH 442
Query: 57 LATPEPARA------PSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRV 110
+ EP S +PG G+P A P+ PG G G + P +PTR
Sbjct: 443 QSV-EPVVMMHMNIQDSGTQPG-GVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIAR 500
Query: 111 PVPAAQISLRWRSGREARPGGPQA-----GRAGDPKADQAMHLQPAWAPKLQPPSVCRQQ 165
P P R + PGGP G A A + L P + Q
Sbjct: 501 PTPP--------QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG 552
Query: 166 PPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
PG A P +P A G +A G P P P
Sbjct: 553 TPG--MAPPPAP---ATASASAGTTNTATTAGPAPGGPAQPPPTPQP 594
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.5 bits (101), Expect = 1e-04
Identities = 63/227 (27%), Positives = 78/227 (34%), Gaps = 34/227 (14%)
Query: 5 GAGAGRSPAARQVAPPGGP---SSLA--RTHSRRHPDHAPPPGR---PSCSRPLCAGSSC 56
G G P APP GP SS+A T+ + APPPG P+ S P S
Sbjct: 383 GNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISH 442
Query: 57 LATPEPARA------PSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRV 110
+ EP S +PG G+P A P+ PG G G + P +PTR
Sbjct: 443 QSV-EPVVMMHMNIQDSGTQPG-GVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIAR 500
Query: 111 PVPAAQISLRWRSGREARPGGPQA-----GRAGDPKADQAMHLQPAWAPKLQPPSVCRQQ 165
P P R + PGGP G A A + L P + Q
Sbjct: 501 PTPP--------QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG 552
Query: 166 PPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
PG A P +P A G +A G P P P
Sbjct: 553 TPG--MAPPPAP---ATASASAGTTNTATTAGPAPGGPAQPPPTPQP 594
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 43.5 bits (101), Expect = 1e-04
Identities = 63/227 (27%), Positives = 78/227 (34%), Gaps = 34/227 (14%)
Query: 5 GAGAGRSPAARQVAPPGGP---SSLA--RTHSRRHPDHAPPPGR---PSCSRPLCAGSSC 56
G G P APP GP SS+A T+ + APPPG P+ S P S
Sbjct: 389 GNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISH 448
Query: 57 LATPEPARA------PSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRV 110
+ EP S +PG G+P A P+ PG G G + P +PTR
Sbjct: 449 QSV-EPVVMMHMNIQDSGTQPG-GVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIAR 506
Query: 111 PVPAAQISLRWRSGREARPGGPQA-----GRAGDPKADQAMHLQPAWAPKLQPPSVCRQQ 165
P P R + PGGP G A A + L P + Q
Sbjct: 507 PTPP--------QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG 558
Query: 166 PPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
PG A P +P A G +A G P P P
Sbjct: 559 TPG--MAPPPAP---ATASASAGTTNTATTAGPAPGGPAQPPPTPQP 600
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 43.1 bits (100), Expect = 2e-04
Identities = 57/235 (24%), Positives = 75/235 (31%), Gaps = 47/235 (20%)
Query: 9 GRSPAARQVAPPGGPSSLA---------------------RTHSRRHPDHAPPPGRPSCS 47
GRS +A+ +PP GP R PD PPP PS
Sbjct: 133 GRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPV-PSTP 191
Query: 48 RPLCAGSSCLATPEPARAPSIAEPGPGIPVAAIKPVILPGGG-------GCTGARTENPP 100
RP+ + +P P PGP P GGG + + PP
Sbjct: 192 RPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPP 251
Query: 101 LSPTRG---DCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQ 157
L PT D + P P + R REA P P +P +
Sbjct: 252 LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNN------------KPPVPSTPR 299
Query: 158 PPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
P + + PP +RP P L + G E R + L + P PSP
Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSS---SGNDETPRLPQRNLSLSSSTPPLPSP 351
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/141 (27%), Positives = 47/141 (33%), Gaps = 23/141 (16%)
Query: 81 KPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDP 140
+P +LP GG T A+ P SP G R PVP+ G + P PQ R P
Sbjct: 125 RPPLLPPGGRSTSAK----PFSPPSGPGRFPVPS--------PGHRSGPPEPQRNRMPPP 172
Query: 141 KADQAMHLQPAWAPKLQPPSVCRQQP--------PGNSR---ARPHSPHLGTRARCPCGC 189
+ D P P + P PG R P P G
Sbjct: 173 RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGG 232
Query: 190 GEARRSALQQLHGGGNRPSAP 210
G R+S L NRP P
Sbjct: 233 GSIRQSPLSSSSPFSNRPPLP 253
Score = 38.1 bits (87), Expect = 0.006
Identities = 58/219 (26%), Positives = 77/219 (35%), Gaps = 32/219 (14%)
Query: 5 GAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPAR 64
G G+ R +P L T SR D PPP P +RP + P
Sbjct: 231 GGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNN 290
Query: 65 APSI-AEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSP-TRGDCRVP-VPAAQISLRW 121
P + + P P A P P +R PPL P + G+ P +P +SL
Sbjct: 291 KPPVPSTPRPSASSQAPPPPPPP-------SRPGPPPLPPSSSGNDETPRLPQRNLSL-- 341
Query: 122 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPP--------GNSRAR 173
+ P P GR+G + P P PP PP SRA
Sbjct: 342 ---SSSTPPLPSPGRSGPLPPPPSERPPP---PVRDPPGRSGPLPPPPPVSRNGSTSRAL 395
Query: 174 PHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
P +P L +R+ G R L +RPSA +P
Sbjct: 396 PATPQLPSRS----GVDSPRSGPRPPL--PPDRPSAGAP 428
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 43.1 bits (100), Expect = 2e-04
Identities = 57/235 (24%), Positives = 75/235 (31%), Gaps = 47/235 (20%)
Query: 9 GRSPAARQVAPPGGPSSLA---------------------RTHSRRHPDHAPPPGRPSCS 47
GRS +A+ +PP GP R PD PPP PS
Sbjct: 133 GRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPV-PSTP 191
Query: 48 RPLCAGSSCLATPEPARAPSIAEPGPGIPVAAIKPVILPGGG-------GCTGARTENPP 100
RP+ + +P P PGP P GGG + + PP
Sbjct: 192 RPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPP 251
Query: 101 LSPTRG---DCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQ 157
L PT D + P P + R REA P P +P +
Sbjct: 252 LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNN------------KPPVPSTPR 299
Query: 158 PPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
P + + PP +RP P L + G E R + L + P PSP
Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSS---SGNDETPRLPQRNLSLSSSTPPLPSP 351
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/141 (27%), Positives = 47/141 (33%), Gaps = 23/141 (16%)
Query: 81 KPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDP 140
+P +LP GG T A+ P SP G R PVP+ G + P PQ R P
Sbjct: 125 RPPLLPPGGRSTSAK----PFSPPSGPGRFPVPS--------PGHRSGPPEPQRNRMPPP 172
Query: 141 KADQAMHLQPAWAPKLQPPSVCRQQP--------PGNSR---ARPHSPHLGTRARCPCGC 189
+ D P P + P PG R P P G
Sbjct: 173 RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGG 232
Query: 190 GEARRSALQQLHGGGNRPSAP 210
G R+S L NRP P
Sbjct: 233 GSIRQSPLSSSSPFSNRPPLP 253
Score = 38.1 bits (87), Expect = 0.006
Identities = 58/219 (26%), Positives = 77/219 (35%), Gaps = 32/219 (14%)
Query: 5 GAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPAR 64
G G+ R +P L T SR D PPP P +RP + P
Sbjct: 231 GGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNN 290
Query: 65 APSI-AEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSP-TRGDCRVP-VPAAQISLRW 121
P + + P P A P P +R PPL P + G+ P +P +SL
Sbjct: 291 KPPVPSTPRPSASSQAPPPPPPP-------SRPGPPPLPPSSSGNDETPRLPQRNLSL-- 341
Query: 122 RSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPP--------GNSRAR 173
+ P P GR+G + P P PP PP SRA
Sbjct: 342 ---SSSTPPLPSPGRSGPLPPPPSERPPP---PVRDPPGRSGPLPPPPPVSRNGSTSRAL 395
Query: 174 PHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
P +P L +R+ G R L +RPSA +P
Sbjct: 396 PATPQLPSRS----GVDSPRSGPRPPL--PPDRPSAGAP 428
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 43.1 bits (100), Expect = 2e-04
Identities = 53/215 (24%), Positives = 68/215 (31%), Gaps = 45/215 (20%)
Query: 5 GAGAGRSPAARQVAPPG----GPSSLARTHSRRHPDH---------APPPGRPSCSRPLC 51
G+ G+ P P G SS + TH H H P G+ S+
Sbjct: 1210 GSKRGKGPFQMPPPPTGQASASSSSASSTHHHHHHHHHGHSHGGLGVLPDGQ---SKLQA 1266
Query: 52 AGSSCLATPEPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRG-DCRV 110
+ P PA P + P +P +P LP G PP+ P R
Sbjct: 1267 LHAQYCQGPGPAPPPYLPPQQPSLPPPPQQPPPLPQLGSIPPPPASAPPVGPHRHFHAHG 1326
Query: 111 PVPAAQISLRWRSGREARPGG---PQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQ--- 164
PVP Q R GR R G PQ G Q P ++P Q P +Q
Sbjct: 1327 PVPGPQHYTLGRPGRAPRRGAGGHPQFAPHGRHPLHQPTSPLPLYSPAPQHPPAHKQGPK 1386
Query: 165 ----------------------QPPGNSRARPHSP 177
+PPG S + PH P
Sbjct: 1387 HFIFSHHPQMMPAAGAAGGPGSRPPGGSYSHPHHP 1421
Score = 30.0 bits (66), Expect = 1.6
Identities = 29/100 (29%), Positives = 34/100 (34%), Gaps = 16/100 (16%)
Query: 6 AGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARA 65
AGA P +R PPGG S HP H P P P L P P
Sbjct: 1400 AGAAGGPGSR---PPGGSYS--------HPHHPQSPLSPHSPIPPHPSYPPLPPPSPHTP 1448
Query: 66 PSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTR 105
S P P + P+ G G + NP P+R
Sbjct: 1449 HS-----PLPPTSPHGPLHASGPPGTANPPSANPKAKPSR 1483
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 42.7 bits (99), Expect = 2e-04
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 15/118 (12%)
Query: 95 RTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAP 154
R+ PPLSP +G + P G P P+ GR G P + PA P
Sbjct: 41 RSFKPPLSPEKGT-KASGPQTSAPSPRDPGLHTPPCSPRRGRRGRPTQEVC----PAPGP 95
Query: 155 KLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
QP C P G + RPH G R C G R AL L RP A P
Sbjct: 96 CAQPAGTCPPPPTGEKQPRPH----GFR----CSHGSKRAPAL--LGAPARRPPAHIP 143
>gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo
sapiens]
Length = 225
Score = 42.7 bits (99), Expect = 2e-04
Identities = 53/174 (30%), Positives = 64/174 (36%), Gaps = 16/174 (9%)
Query: 10 RSPAARQVAPPGGPSSLARTHSRRHPDHA-PPPGRPSCSRPLCAGSSCLATPEPARAPSI 68
RSP + V PPG P S+ R PD PPPG P S L S P P R+P
Sbjct: 53 RSPDS-VVPPPGSPDSVVLPP--RSPDSVVPPPGSPD-SVVLPPRSPDSVVP-PPRSPDS 107
Query: 69 AEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREAR 128
P PG P + + P P ++ L P D VP PA R+G
Sbjct: 108 VVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP-PARSPDSGGRAGSPRS 166
Query: 129 PGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTR 182
P A RA P WA + + R P SR S L +R
Sbjct: 167 LAPPAAARAEG---------APGWAGRWGRVPLARSPPQVPSRPPSLSQPLSSR 211
Score = 30.4 bits (67), Expect = 1.2
Identities = 54/205 (26%), Positives = 71/205 (34%), Gaps = 30/205 (14%)
Query: 24 SSLARTHS----RRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAA 79
S+ THS R PD P R S L GS + P+R+P P PG P +
Sbjct: 10 STWPSTHSVVLPSRSPDSVVLPSRSPDSVVLPPGSPD-SVVLPSRSPDSVVPPPGSPDSV 68
Query: 80 IKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQA----G 135
+ P P ++ L P D VP P + S+ PG P +
Sbjct: 69 VLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPRSPDSV------VPPPGSPDSVVLPP 122
Query: 136 RAGD-----PKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCG 190
R+ D P + ++ L P + PP+ R G P S AR G
Sbjct: 123 RSPDSVVPPPGSPDSVVLPPRSPDSVVPPA--RSPDSGGRAGSPRSLAPPAAARAEGAPG 180
Query: 191 EARRSALQQLHGGGNRPSAPSPVAV 215
A R G P A SP V
Sbjct: 181 WAGR--------WGRVPLARSPPQV 197
>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 42.7 bits (99), Expect = 2e-04
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 15/118 (12%)
Query: 95 RTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAP 154
R+ PPLSP +G + P G P P+ GR G P + PA P
Sbjct: 41 RSFKPPLSPEKGT-KASGPQTSAPSPRDPGLHTPPCSPRRGRRGRPTQEVC----PAPGP 95
Query: 155 KLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
QP C P G + RPH G R C G R AL L RP A P
Sbjct: 96 CAQPAGTCPPPPTGEKQPRPH----GFR----CSHGSKRAPAL--LGAPARRPPAHIP 143
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.7 bits (99), Expect = 2e-04
Identities = 56/194 (28%), Positives = 70/194 (36%), Gaps = 39/194 (20%)
Query: 17 VAPPG---GPSSLARTHSRRHPDHAPPPGR-------------PSCSRP--LCAGSSCLA 58
+APP P+SL P APPP + P C P L A S L
Sbjct: 518 LAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLT 577
Query: 59 TPEPARAPSIAEPGPGIPVAAIKPVI--LPGGGGCTGARTENPPLSPTRGDCRVPVPAA- 115
TP P SIA P P P A P + LP +PPLSP P P A
Sbjct: 578 TPPPETPSSIATPPPQAPPALASPPLQGLP-----------SPPLSP----LATPPPQAP 622
Query: 116 -QISLRWRSGREARPGGPQAG--RAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRA 172
++L + P P P+A A+ + AP PPS Q P +
Sbjct: 623 PXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 682
Query: 173 RPHSPHLGTRARCP 186
P SP ++ P
Sbjct: 683 PPVSPSATPPSQAP 696
Score = 40.0 bits (92), Expect = 0.002
Identities = 62/244 (25%), Positives = 83/244 (34%), Gaps = 44/244 (18%)
Query: 4 GGAGA-GRSPAARQV-----------APPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLC 51
G AGA GR P A + AP GP+ A T SR P GR + P
Sbjct: 48 GAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPP-A 106
Query: 52 AGSSCLATPEPARAPSIAEPGP----GIPVAAIKPVILPGGGGCTGARTENPPLSPTRGD 107
+S P RA PGP G+ ++A + V G T A + + R D
Sbjct: 107 KNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETV---ARGKATEAPKRSALSAGARRD 163
Query: 108 CRVPVPAAQISLRWRSGR-------------EARPGGPQAG-RAGDPKADQAMHLQPAWA 153
P P R R ARP P G R A + +P+ A
Sbjct: 164 TSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPA 223
Query: 154 PKLQPPSVCRQQPPGNSRARPHSPHLGTRARC-PCGCGEARRSALQQLHGGGNRPSAPSP 212
+ +P + Q P + + L + AR P G R A PS P P
Sbjct: 224 ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA---------HPSQPKP 274
Query: 213 VAVE 216
++
Sbjct: 275 KGLQ 278
Score = 39.7 bits (91), Expect = 0.002
Identities = 47/171 (27%), Positives = 61/171 (35%), Gaps = 30/171 (17%)
Query: 12 PAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEP 71
P+ PP PSS+A + P A PP + S PL S LATP P P +A P
Sbjct: 573 PSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPL----SPLATPPPQAPPXLALP 628
Query: 72 GPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAA--QISLRWRSGREARP 129
P+ P +PP SP P P A +++ + P
Sbjct: 629 ----------PLQAP----------PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 668
Query: 130 GGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCR---QQPPGNSRARPHSP 177
P P A + A P PPS+ Q PP + P SP
Sbjct: 669 PSPPVQAPFSPPASPPVS-PSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 718
Score = 37.7 bits (86), Expect = 0.008
Identities = 53/191 (27%), Positives = 65/191 (34%), Gaps = 48/191 (25%)
Query: 19 PPGGPSSLARTHSRRHPDHAPP---------------------PGRPSCSRPLCAGSSCL 57
PP P+SL + + P APP P PS S P+ S L
Sbjct: 769 PPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPM----SPL 824
Query: 58 ATPEPARAPSIAEPGPGIP--------VAAIKPVILPG------GGGCTGARTENPPLSP 103
ATP P P +A P +P + A + PG G T A PP P
Sbjct: 825 ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPP 884
Query: 104 TRGDCRV---PVPAAQISLRWRSGREAR--PGGPQAGRAGDPKAD---QAMHLQPAWAPK 155
+R P A S + E R GP+ G A P D A H AW+
Sbjct: 885 SRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH-PAAWSRG 943
Query: 156 LQPPSVCRQQP 166
PP R P
Sbjct: 944 PAPPLAFRGAP 954
Score = 36.2 bits (82), Expect = 0.022
Identities = 45/168 (26%), Positives = 62/168 (36%), Gaps = 18/168 (10%)
Query: 10 RSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIA 69
++P + +PP PS A S+ P A PP + S P S ATP P P +A
Sbjct: 674 QAPFSPPASPPVSPS--ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA 731
Query: 70 EPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARP 129
P +P + P + + T P + P + VP S + P
Sbjct: 732 APPLQVPPSP------PASPPMSPSATPPPRVPPLLAAPPLQVPP--------SPPASLP 777
Query: 130 GGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSP 177
P A P+A A+ P A P S Q P S + P SP
Sbjct: 778 MSPLA--KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 823
Score = 29.6 bits (65), Expect = 2.1
Identities = 46/176 (26%), Positives = 58/176 (32%), Gaps = 47/176 (26%)
Query: 7 GAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAP 66
G R+PA P G +L P PP + + SS LATP P+
Sbjct: 261 GTPRAPAHPSQPKPKGLQAL-------RPPQVTPPRKDAAPALGPLSSSPLATPSPSGTK 313
Query: 67 SIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGRE 126
+ P P A P LP +PPL+ P+P A
Sbjct: 314 ARPVPPPD-NAATPLPATLP----------PSPPLA-------TPLPLA----------- 344
Query: 127 ARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVC---RQQPPGNSRARP-HSPH 178
P P A P + Q + PA P PPS+ Q PP P PH
Sbjct: 345 --PPSPSA-----PPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPH 393
>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 42.7 bits (99), Expect = 2e-04
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 15/118 (12%)
Query: 95 RTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAP 154
R+ PPLSP +G + P G P P+ GR G P + PA P
Sbjct: 41 RSFKPPLSPEKGT-KASGPQTSAPSPRDPGLHTPPCSPRRGRRGRPTQEVC----PAPGP 95
Query: 155 KLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSP 212
QP C P G + RPH G R C G R AL L RP A P
Sbjct: 96 CAQPAGTCPPPPTGEKQPRPH----GFR----CSHGSKRAPAL--LGAPARRPPAHIP 143
>gi|21687188 hypothetical protein LOC146325 [Homo sapiens]
Length = 571
Score = 42.4 bits (98), Expect = 3e-04
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 23 PSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPVAAIKP 82
P R S HAP P RP S P P+ AR P+ A P P + VA I
Sbjct: 72 PDWACRRGSTTPRPHAPTPDRPGESDPG-------RQPQGAR-PTGAAPAPDLVVADIHS 123
Query: 83 VILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKA 142
+ GG + PP R + P P+ + W+ G P G AG
Sbjct: 124 LHCGGGPKSRAKGSPGPPPPVARATRKGPGPSGLLPESWKPGMGGDPRGVGAGDMASAGP 183
Query: 143 DQAMHLQPAWAP 154
+ ++ P AP
Sbjct: 184 EGSVPCYPPPAP 195
Score = 29.6 bits (65), Expect = 2.1
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 21/95 (22%)
Query: 18 APPGGPSSLARTHSRRHPDHAP--------PPGR--PSCSRPLCAGSSCLATPEPARAPS 67
AP GP +L R P+ P PPG P+ +P ++ A S
Sbjct: 472 APAKGPQALGEAWGR--PELGPVLTGGTPEPPGMLGPAAPQPFSGHTT------KCEADS 523
Query: 68 IAEPGPGIPVAAIKPVILPGG--GGCTGARTENPP 100
P PG+P+AA ++PG G C R+ P
Sbjct: 524 SVPP-PGLPLAAPDDPVIPGSGWGTCVATRSSQTP 557
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 42.4 bits (98), Expect = 3e-04
Identities = 42/173 (24%), Positives = 56/173 (32%), Gaps = 22/173 (12%)
Query: 9 GRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPAR---- 64
G + R PPG P + PPPG+P P S P P +
Sbjct: 43 GGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERP 102
Query: 65 APSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSG 124
P G P KP P GG R PP P R P P + G
Sbjct: 103 PPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPER-----PPP--------QGG 149
Query: 125 REARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSP 177
+++ P G+ P + + A +P +P Q PP +P P
Sbjct: 150 NQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKP-----QGPPQQEGNKPQGP 197
Score = 30.4 bits (67), Expect = 1.2
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 10 RSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIA 69
+S +AR +PPG P + + P PPPG+P P AG + P+ +AP
Sbjct: 172 KSRSAR--SPPGKPQGPPQQEGNK-PQGPPPPGKPQGPPP--AGGN----PQQPQAPPAG 222
Query: 70 EP-GPGIPVAAIKP 82
+P GP P +P
Sbjct: 223 KPQGPPPPPQGGRP 236
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,383,371
Number of Sequences: 37866
Number of extensions: 1051079
Number of successful extensions: 6415
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 851
Number of HSP's that attempted gapping in prelim test: 5053
Number of HSP's gapped (non-prelim): 1938
length of query: 218
length of database: 18,247,518
effective HSP length: 98
effective length of query: 120
effective length of database: 14,536,650
effective search space: 1744398000
effective search space used: 1744398000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.