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Search of human proteins with 169217599
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169217599 PREDICTED: hypothetical protein [Homo sapiens]
(322 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169217599 PREDICTED: hypothetical protein [Homo sapiens] 681 0.0
gi|169216125 PREDICTED: hypothetical protein [Homo sapiens] 560 e-160
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 40 0.003
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 39 0.005
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 39 0.005
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 39 0.005
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 39 0.006
gi|148596968 tripartite motif-containing 8 [Homo sapiens] 39 0.008
gi|39995080 hypothetical protein LOC79567 [Homo sapiens] 38 0.014
gi|71999153 hypothetical protein LOC23334 [Homo sapiens] 37 0.031
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 36 0.040
gi|46094081 development and differentiation enhancing factor 1 [... 35 0.069
gi|164565408 common-site lymphoma/leukemia guanine nucleotide ex... 35 0.069
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 35 0.090
gi|12232415 hypothetical protein LOC64762 [Homo sapiens] 35 0.090
gi|110815800 WD repeat domain 32 [Homo sapiens] 35 0.12
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 35 0.12
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 35 0.12
gi|186910323 hypothetical protein LOC79969 isoform 2 [Homo sapiens] 35 0.12
gi|18079216 CASK interacting protein 1 [Homo sapiens] 34 0.15
gi|58532587 BTB (POZ) domain containing 7 isoform 1 [Homo sapiens] 34 0.15
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 34 0.20
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 34 0.20
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 34 0.20
gi|61966923 forkhead box B2 [Homo sapiens] 34 0.20
gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens] 33 0.26
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
>gi|169217599 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 681 bits (1758), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MAAPLQASMTSGLGNVPPSELEGHWFPPAGNRGNLYKPTNTSSLFLPLGPWRLLRGPNGT 60
MAAPLQASMTSGLGNVPPSELEGHWFPPAGNRGNLYKPTNTSSLFLPLGPWRLLRGPNGT
Sbjct: 1 MAAPLQASMTSGLGNVPPSELEGHWFPPAGNRGNLYKPTNTSSLFLPLGPWRLLRGPNGT 60
Query: 61 WRKAFITSPLGTVHRVPGAASGTEVNAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPL 120
WRKAFITSPLGTVHRVPGAASGTEVNAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPL
Sbjct: 61 WRKAFITSPLGTVHRVPGAASGTEVNAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPL 120
Query: 121 TTGPPGRRVACSEAGPETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHR 180
TTGPPGRRVACSEAGPETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHR
Sbjct: 121 TTGPPGRRVACSEAGPETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHR 180
Query: 181 RCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRS 240
RCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRS
Sbjct: 181 RCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRS 240
Query: 241 CASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDKLLGAKVLTAGP 300
CASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDKLLGAKVLTAGP
Sbjct: 241 CASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDKLLGAKVLTAGP 300
Query: 301 LSNVFRHPDKMSVFTAAVNFLP 322
LSNVFRHPDKMSVFTAAVNFLP
Sbjct: 301 LSNVFRHPDKMSVFTAAVNFLP 322
>gi|169216125 PREDICTED: hypothetical protein [Homo sapiens]
Length = 309
Score = 560 bits (1444), Expect = e-160
Identities = 281/345 (81%), Positives = 282/345 (81%), Gaps = 59/345 (17%)
Query: 1 MAAPLQASMTSGLGNVPPSELEGHWFPPAGNR-----------------------GNLYK 37
MAAPLQASMTSGLGNVPPSELEGHWFPPAGNR GNLYK
Sbjct: 1 MAAPLQASMTSGLGNVPPSELEGHWFPPAGNRNTVSPSFLQDPRLSSELPESSGCGNLYK 60
Query: 38 PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPPPDPQ 97
PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPP P
Sbjct: 61 PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPTP--- 117
Query: 98 DERAFREESAVSQEGVTAVHSPLTTGPPGRRVACSEAGPETPQHPWSLYSGLTVSSQELD 157
R+ R ES PQHPWSLYSGLTVSSQELD
Sbjct: 118 --RSPRRESV-------------------------------PQHPWSLYSGLTVSSQELD 144
Query: 158 LCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPG 217
LCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPG
Sbjct: 145 LCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPG 204
Query: 218 RQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLC 277
RQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLC
Sbjct: 205 RQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLC 264
Query: 278 PDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSVFTAAVNFLP 322
PDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSVFTAAVNFLP
Sbjct: 265 PDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSVFTAAVNFLP 309
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 17/138 (12%)
Query: 177 PHHRRCASEHNLFLPIHPPPP-----PPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKG 231
P +R A+ L P P PP PPR H P+AH PG RG R +G
Sbjct: 137 PEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPG-----RGSGRVPRG 191
Query: 232 RPCIPGWRSCASALLVRTLSLCKL-------SEPPPAPASRLSWFLGPRSLLCPDLPGPD 284
+P W +S L S+ L P PAP +R G R + P
Sbjct: 192 QPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAAR 251
Query: 285 GNPDKLLGAKVLTAGPLS 302
G+ + A++L A +S
Sbjct: 252 GSAQQPPLARLLLASAVS 269
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 17/138 (12%)
Query: 177 PHHRRCASEHNLFLPIHPPPP-----PPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKG 231
P +R A+ L P P PP PPR H P+AH PG RG R +G
Sbjct: 137 PEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPG-----RGSGRVPRG 191
Query: 232 RPCIPGWRSCASALLVRTLSLCKL-------SEPPPAPASRLSWFLGPRSLLCPDLPGPD 284
+P W +S L S+ L P PAP +R G R + P
Sbjct: 192 QPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAAR 251
Query: 285 GNPDKLLGAKVLTAGPLS 302
G+ + A++L A +S
Sbjct: 252 GSAQQPPLARLLLASAVS 269
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 40.0 bits (92), Expect = 0.003
Identities = 58/213 (27%), Positives = 82/213 (38%), Gaps = 37/213 (17%)
Query: 85 VNAEAIPPP---PDPQ---DERAFREESAVSQEGVTAVHSPLTT-----GPPGRRVACSE 133
+ A+A+ PP P+PQ + F + A+ G PL G PG + +
Sbjct: 259 LEAQALEPPSPEPEPQLLDPQPRFLDPQALEPLGEALELPPLQPLADPLGLPGLALQALD 318
Query: 134 AGPETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHR---RCASEHNLFL 190
P+ SL S L + Q LD K L PG RL + C L L
Sbjct: 319 TLPD------SLESQL-LDPQALDPL------PKLLDVPGRRLEPQQPLGHCPLAEPLRL 365
Query: 191 PI---HPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLV 247
+ H PP P P++A R R R ++ RR+ +GR G L +
Sbjct: 366 DLCSPHGPPGPEGHPKYALR-------RTDRPKILCRRRKAGRGRKADAGPEGRLLPLPM 418
Query: 248 RTLSLCKLSEPPPAPASRLSWFLGPRSLLCPDL 280
T + L+EPPP P GP + P+L
Sbjct: 419 PTGLVAALAEPPPPPPPPPPALPGPGPVSVPEL 451
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 39.3 bits (90), Expect = 0.005
Identities = 42/140 (30%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 86 NAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPLTTGPPGRRVACSEAGPETPQHPWSL 145
N P P PQD + + SA Q+ + P P G A S A P TPQ P
Sbjct: 154 NRSTSPSIPSPQDNESDSDSSA--QQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP--- 208
Query: 146 YSGLTVSSQELDLCFCTNITE--KRLQTPGARLP----------HHRRCASEHNLFLPIH 193
G T S+ + ++ + Q P A +P H +R S H P H
Sbjct: 209 TPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP---PPH 265
Query: 194 PPPPPPRAPRHAGRSGLPTA 213
P P PP P G +G P+A
Sbjct: 266 PSPHPPLQPL-TGSAGQPSA 284
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 39.3 bits (90), Expect = 0.005
Identities = 42/140 (30%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 86 NAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPLTTGPPGRRVACSEAGPETPQHPWSL 145
N P P PQD + + SA Q+ + P P G A S A P TPQ P
Sbjct: 708 NRSTSPSIPSPQDNESDSDSSA--QQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP--- 762
Query: 146 YSGLTVSSQELDLCFCTNITE--KRLQTPGARLP----------HHRRCASEHNLFLPIH 193
G T S+ + ++ + Q P A +P H +R S H P H
Sbjct: 763 TPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP---PPH 819
Query: 194 PPPPPPRAPRHAGRSGLPTA 213
P P PP P G +G P+A
Sbjct: 820 PSPHPPLQPL-TGSAGQPSA 838
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 39.3 bits (90), Expect = 0.005
Identities = 42/140 (30%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 86 NAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPLTTGPPGRRVACSEAGPETPQHPWSL 145
N P P PQD + + SA Q+ + P P G A S A P TPQ P
Sbjct: 708 NRSTSPSIPSPQDNESDSDSSA--QQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP--- 762
Query: 146 YSGLTVSSQELDLCFCTNITE--KRLQTPGARLP----------HHRRCASEHNLFLPIH 193
G T S+ + ++ + Q P A +P H +R S H P H
Sbjct: 763 TPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP---PPH 819
Query: 194 PPPPPPRAPRHAGRSGLPTA 213
P P PP P G +G P+A
Sbjct: 820 PSPHPPLQPL-TGSAGQPSA 838
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 38.9 bits (89), Expect = 0.006
Identities = 56/215 (26%), Positives = 78/215 (36%), Gaps = 46/215 (21%)
Query: 77 PGAASGTEVNAEAIPPPPDPQD------------------ERAFREESAVSQEGVTAVHS 118
P G+E A A P PP+P + ER S S + T
Sbjct: 536 PPTTGGSE-GAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLP 594
Query: 119 PL-TTGPPGRRVACSEAGPETPQHPWSLYS-GLTVSSQELDLCFCTNI------TEKRLQ 170
P GPP + +A P P+ SL S G +VSS LC ++ + ++
Sbjct: 595 PKGLAGPPA---SPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQIL 651
Query: 171 TP-GAR--LPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRR 227
TP G R +P H + + P PPP PR+P P A +V G
Sbjct: 652 TPLGDRFVIPPHPKVPA------PFSPPPSKPRSPN-------PAAPALAAPAVVPGPVS 698
Query: 228 TSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAP 262
T+ P P L + + K PPP+P
Sbjct: 699 TTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSP 733
Score = 30.4 bits (67), Expect = 2.2
Identities = 45/183 (24%), Positives = 64/183 (34%), Gaps = 31/183 (16%)
Query: 91 PPPPDPQDERAFREESAVSQEGVTAVHSPLTTGPPGRRVACSEAGPETPQHPWSLYSGLT 150
PPPP P+++ + +E +V SP GP G PE L S
Sbjct: 772 PPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSG--------SPE-------LVSSPA 816
Query: 151 VSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGL 210
SS ++ T ++Q PG+ P A P H P + P + G
Sbjct: 817 ASS--------SSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGG 868
Query: 211 PTAH-------RPGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPA 263
P P +VR R + G P A +R +L + P PAP+
Sbjct: 869 PPREDVGAPLVTPSLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRR-ALSGRASPVPAPS 927
Query: 264 SRL 266
S L
Sbjct: 928 SGL 930
Score = 30.0 bits (66), Expect = 2.9
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 248 RTLSLCKLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDK 289
R++SL KL PPP P R + L R L PD GP G P K
Sbjct: 487 RSVSLRKLKRPPPPP--RRTHSLHQRGLAVPD--GPLGLPPK 524
Score = 29.6 bits (65), Expect = 3.8
Identities = 62/297 (20%), Positives = 96/297 (32%), Gaps = 87/297 (29%)
Query: 8 SMTSGLGNVPPSELEGHWFPPAG-NRGNLYKPTNTSSLFLPLGPWRLLRGPNGTWRKAFI 66
S SG +PP L G PPA + KP +SL R P + +
Sbjct: 585 SSQSGTPTLPPKGLAG---PPASPGKAQPPKPERVTSL----------RSPGASVSSSLT 631
Query: 67 TSPLGTVHRVPGAASGTEVNA---EAIPPPPDPQDERAFREESAVSQE---GVTAVHSPL 120
+ + P SG ++ + PP P+ F + + A+ +P
Sbjct: 632 SLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPA 691
Query: 121 TTGPPGRRVACSEAGPETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHR 180
P V+ ++A P++P P + + L S + K P + P +
Sbjct: 692 VVPGP---VSTTDASPQSPPTPQTTLTPLQESP----------VISKDQSPPPSPPPSY- 737
Query: 181 RCASEHNLFLPIHPPPPPPRAPRHA--GRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGW 238
HPPPPP + P S TA P + P W
Sbjct: 738 ------------HPPPPPTKKPEVVVEAPSASETAEEPLQD----------------PNW 769
Query: 239 RSCASALLVRTLSLCKLSEPPPAPASR---LSWFLGPR----SLLCPDLPGPDGNPD 288
PPPAP + ++ F P S+ P+ GP G+P+
Sbjct: 770 P----------------PPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPE 810
>gi|148596968 tripartite motif-containing 8 [Homo sapiens]
Length = 551
Score = 38.5 bits (88), Expect = 0.008
Identities = 37/158 (23%), Positives = 55/158 (34%), Gaps = 13/158 (8%)
Query: 67 TSPLGTVHRVPGAASGTEVNAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPLTTGPPG 126
+ P+G + G ASG + + + P Q A G VHS P
Sbjct: 393 SGPVGGQYGAAGTASGEGQSGQPLGPCSSTQHLVAL-------PGGAQPVHSSPVFPPSQ 445
Query: 127 RRVACSEAGPETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEH 186
+ P PQ Y G + +D C+C+++ P R H
Sbjct: 446 YPNGSAAQQPMLPQ-----YGGRKILVCSVDNCYCSSVANHGGHQPYPRSGHFPWTVPSQ 500
Query: 187 NLFLPIHPPPPPPRA-PRHAGRSGLPTAHRPGRQGLVR 223
P+ P P P++ P A R L + +PG Q R
Sbjct: 501 EYSHPLPPTPSVPQSLPSLAVRDWLDASQQPGHQDFYR 538
>gi|39995080 hypothetical protein LOC79567 [Homo sapiens]
Length = 1219
Score = 37.7 bits (86), Expect = 0.014
Identities = 50/242 (20%), Positives = 77/242 (31%), Gaps = 32/242 (13%)
Query: 79 AASGTEVNAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPL--TTGPPGRRVACSEAGP 136
A S T ++P DP + G + + P TTG + + + P
Sbjct: 504 ATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTTGSTYSAITTTHSAP 563
Query: 137 ETPQHPWS------LYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFL 190
H + + S LT + L++ T T + P H + H
Sbjct: 564 SPLTHTTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHTMPS--PTHTTASPTHTSTS 621
Query: 191 PIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRTL 250
P H P +P H PT P G+ + TS P S +L+
Sbjct: 622 PTHTPT----SPTHKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPTTSPILINV- 676
Query: 251 SLCKLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDK 310
P+ + L+ P P LPG D P + P+SN + D
Sbjct: 677 --------SPSTSLELATLSSPSKHSDPTLPGTDSLP---------CSPPVSNSYTQADP 719
Query: 311 MS 312
M+
Sbjct: 720 MA 721
>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
Length = 2533
Score = 36.6 bits (83), Expect = 0.031
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 169 LQTPGARLPHHRRCASEHNLFLP--------------IHPPPPPPRAPRHAGRSGLPTAH 214
++ P A P H R SE + P + PP PPP RH G S L T H
Sbjct: 728 VELPTASDPQHHRSTSESSASFPRSPGQPSSLRSDDGLGPPLPPPEEERHPGLSNLATPH 787
Query: 215 R 215
R
Sbjct: 788 R 788
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 36.2 bits (82), Expect = 0.040
Identities = 44/171 (25%), Positives = 65/171 (38%), Gaps = 33/171 (19%)
Query: 77 PGAASGTEVNAEAIPPPPDPQDERAFREESAVSQEGVTA--VHSPLTTGPPGRRVACSEA 134
PGA G + +PPPP + S+ Q G + L TGP ++ E
Sbjct: 946 PGARGGLGLPEHFLPPPPSSRSP-----SSSPGQLGQPPGELSLGLATGP----LSTPET 996
Query: 135 GPETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHH---------RRCASE 185
P P+ P SL +G + + + T + +P P R S
Sbjct: 997 PPRQPEPP-SLVAGASGGASPV------GFTPRGGLSPPGHSPGPPRTFPSAPPRASGSH 1049
Query: 186 HNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIP 236
+L LP PPPP+ P+ G L PGR L + + S +P +P
Sbjct: 1050 GSLLLPPASSPPPPQVPQRRGTPPL----TPGR--LTQDLKLISASQPALP 1094
>gi|46094081 development and differentiation enhancing factor 1
[Homo sapiens]
Length = 1129
Score = 35.4 bits (80), Expect = 0.069
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 22/118 (18%)
Query: 38 PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPPPDPQ 97
PT+ ++ PL P +GP G P T+ +SG+ ++ PPPP P
Sbjct: 783 PTSPTTEAPPLPPRNAGKGPTG---------PPSTLPLSTQTSSGSSTLSKKRPPPPPPG 833
Query: 98 DERAFREESAVSQEGVTAVHSPLTTGPPGRRVA--CSEAGPETPQHPWSLYSGLTVSS 153
+R + SPL GPP + ++ GP + + + GL+ S
Sbjct: 834 HKRTLSDPP-----------SPLPHGPPNKGAVPWGNDGGPSSSSKTTNKFEGLSQQS 880
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 172 PGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLV 222
P + LP + +S + PPPPPP R P H P +G V
Sbjct: 805 PPSTLPLSTQTSSGSSTLSKKRPPPPPPGHKRTLSDPPSPLPHGPPNKGAV 855
>gi|164565408 common-site lymphoma/leukemia guanine nucleotide
exchange factor [Homo sapiens]
Length = 1386
Score = 35.4 bits (80), Expect = 0.069
Identities = 59/220 (26%), Positives = 76/220 (34%), Gaps = 52/220 (23%)
Query: 61 WRKAFITSPL-GTVHRVPGAASGTEVNAEAIPPPPDPQ--DERAFREESAVSQEGVTAVH 117
W +A TSP G++ + G A A PP P+P D + + ++ Q+ + H
Sbjct: 1156 WVQALPTSPKQGSLPDIQGPA--------AAPPLPEPSLTDTQVQKLTPSLEQKSLIDAH 1207
Query: 118 SPLTTGPPGRRVACSEAG-PETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARL 176
P T P R + G TP T L PG L
Sbjct: 1208 VPAATPLPERGGSLDIQGLSPTPVQ-----------------------TTMVLSKPGGSL 1244
Query: 177 PHHRRCASEHNLFLPIHPPPPPPR---APRHAGRSGLPTAHRPG-----RQGLVRGRRRT 228
H +L P H PPP R P A S A RQG G
Sbjct: 1245 ASHVARLESSDL-TPPHSPPPSSRQLLGPNAAALSRYLAASYISQSLARRQGPGGGAPAA 1303
Query: 229 SKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSW 268
S+G S +SA R S +PPP PA RLS+
Sbjct: 1304 SRG--------SWSSAPTSRASSPPPQPQPPPPPARRLSY 1335
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 35.0 bits (79), Expect = 0.090
Identities = 44/176 (25%), Positives = 63/176 (35%), Gaps = 19/176 (10%)
Query: 104 EESAVSQEGVTAVHSPLTTGPPGRRVACSEAGPETPQHPWSLYSGLTVSSQELDLCFCTN 163
+E+A+ QE V + G+RV P PQ + S + Q + FC
Sbjct: 686 QENAIIQEIVKYDREMVQQAELGQRVGLFPPPPPPPQ----VTSAIATLQQAAAMSFCPQ 741
Query: 164 ITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPP----------RAPRHAGRSGLPTA 213
+ + P R P PPPP RAPR + GLP A
Sbjct: 742 VARPLVGPLALGSPRLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAA 801
Query: 214 HRPG----RQGLVRGRRRTSKGRPCIP-GWRSCASALLVRTLSLCKLSEPPPAPAS 264
G + L R R S +P +P G A++ + S +L P A A+
Sbjct: 802 PLAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAA 857
Score = 32.7 bits (73), Expect = 0.44
Identities = 41/137 (29%), Positives = 49/137 (35%), Gaps = 32/137 (23%)
Query: 191 PIHPPPPPPRAPRHAGRSGLPTAHRPG--------------------RQGLVRGR---RR 227
P PPPPPP P+ P A PG +G RGR R
Sbjct: 20 PGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRD 79
Query: 228 TSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGPR-SLLCPDL---PGP 283
+S GRP PG S A C EP +PA GP+ S C P P
Sbjct: 80 SSCGRPGTPGAASTAKG---SPNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAASGPAP 136
Query: 284 DGNPDKLLGAKVLTAGP 300
P + G++ AGP
Sbjct: 137 GPGPAEEAGSE--EAGP 151
>gi|12232415 hypothetical protein LOC64762 [Homo sapiens]
Length = 875
Score = 35.0 bits (79), Expect = 0.090
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 59 GTWRKAFITSPLGTVHRVPGAASGTEVNAE-AIPPPPDPQDERAFREESAVSQEGVTAVH 117
G+ R TSPL +PG +++ A+PPPP P A REE +
Sbjct: 483 GSVRSKCATSPLP----IPGTLGAAVKSSDTALPPPPVPPKSEAVREECRLLNAPPVPPR 538
Query: 118 S--PLTTGP--PGRRVACSEAGPETPQHPWSLYS 147
S PL+T P P R V + +P S YS
Sbjct: 539 SAKPLSTSPSIPPRTVKPARQQTRSPSPTLSYYS 572
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.12
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 191 PIHP------PPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIP 236
P+HP PPPP R+PR G L A R G GL ++ P P
Sbjct: 37 PLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESSTASAPGEP 88
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 34.7 bits (78), Expect = 0.12
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 25/93 (26%)
Query: 191 PIHPPPPPPRAPRHAG------------------RSGLPTAHRPGRQGLVRGRRRTSKGR 232
P PPPPPP AP G S P +P R G +GRR ++ R
Sbjct: 69 PEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRGPVGTKPKRPG--QGRRAGARMR 126
Query: 233 PCIPGWRSCASALLVRTLSLCKLSEPPPAPASR 265
P AS ++ S PPP P SR
Sbjct: 127 SAAP-----ASPRARAARAISNQSSPPPPPPSR 154
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 34.7 bits (78), Expect = 0.12
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 25/93 (26%)
Query: 191 PIHPPPPPPRAPRHAG------------------RSGLPTAHRPGRQGLVRGRRRTSKGR 232
P PPPPPP AP G S P +P R G +GRR ++ R
Sbjct: 69 PEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRGPVGTKPKRPG--QGRRAGARMR 126
Query: 233 PCIPGWRSCASALLVRTLSLCKLSEPPPAPASR 265
P AS ++ S PPP P SR
Sbjct: 127 SAAP-----ASPRARAARAISNQSSPPPPPPSR 154
>gi|186910323 hypothetical protein LOC79969 isoform 2 [Homo sapiens]
Length = 333
Score = 34.7 bits (78), Expect = 0.12
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 15/79 (18%)
Query: 188 LFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLV 247
L + + PP P RAPR A P AH P R + RP +P L+
Sbjct: 243 LKVAVEPPWPLNRAPRRA----TPPAHPPPRSSSLGNSPERGPLRPFVP------EQELL 292
Query: 248 RTLSLCKLSEPPPAPASRL 266
R+L LC PP P +RL
Sbjct: 293 RSLRLC-----PPHPTARL 306
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 34.3 bits (77), Expect = 0.15
Identities = 41/158 (25%), Positives = 54/158 (34%), Gaps = 35/158 (22%)
Query: 71 GTVHRVPGAASGTEVNAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPLTTGPPGRRVA 130
GTV R P + + +PPPP P + H P P G A
Sbjct: 1175 GTVRRRPASE---QAGPPELPPPPPPAEPPP-----------TDLAHLPPLPPPEGE--A 1218
Query: 131 CSEAGPETPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFL 190
A P P ++ L T K++ PG P +R H
Sbjct: 1219 RKPAKPPVSPKP-------VLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRA---HGTPP 1268
Query: 191 PIHP-PPPPPRAPR--------HAGRSGLPTAHRPGRQ 219
P+ P PPPPP AP+ +G +G A P RQ
Sbjct: 1269 PVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQ 1306
>gi|58532587 BTB (POZ) domain containing 7 isoform 1 [Homo sapiens]
Length = 1132
Score = 34.3 bits (77), Expect = 0.15
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 10 TSGLGNVPPSELEGHWFPPAGNRGNLYKPTNTSSLFLPLGPWRLLRGPNGTWRKAFITSP 69
T L PS +G +F P N P+ S +L P + R+ + SP
Sbjct: 957 TPALSRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYL---PGQTSPKKQEEARREYPLSP 1013
Query: 70 LGTVHRVPGAASGTEVNAEAIPPPPDPQDERAFREESA----VSQEGVTAVHSPLTTGPP 125
G +HR ++ + + PP D E+A G TAV + LT G
Sbjct: 1014 DGHLHR----QKNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLT 1069
Query: 126 GRRVACSEAGPETPQ 140
R + S E P+
Sbjct: 1070 PNRPSLSACSSEAPE 1084
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 33.9 bits (76), Expect = 0.20
Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 165 TEKRLQTPGARLPHHRRCASEHNLFLPIHPPP-PPPR----APRHAGRSGLPTAHRPGRQ 219
T R +PGAR P S L P PPP P PR APRH G G P R RQ
Sbjct: 170 TGPRHASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEG--GRPGRGRTRRQ 227
Query: 220 GLVRG 224
+ G
Sbjct: 228 PHLAG 232
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 33.9 bits (76), Expect = 0.20
Identities = 49/193 (25%), Positives = 65/193 (33%), Gaps = 54/193 (27%)
Query: 91 PPPPDPQDERAFREESAVSQEGVTAVHSPLTTGPPGRRVACSEAGPETPQHPWSLYSGLT 150
PPPP P S +S + V +PL P P P P Y GL
Sbjct: 226 PPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPP---------IPPPLPLLPPCGYPGLK 276
Query: 151 V--SSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLP---------IHPPPPPP 199
+S D + P LP + C+ +L P PPP PP
Sbjct: 277 AEPASPAQD--------AQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPP 328
Query: 200 RA------PRHAGRSGLPTAHR-PGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSL 252
++ P+ AG LP PG Q ++ +R GRP G +
Sbjct: 329 KSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRH---GRPGAGGGK------------- 372
Query: 253 CKLSEPPPAPASR 265
PPPAP +R
Sbjct: 373 ---LNPPPAPPAR 382
Score = 29.3 bits (64), Expect = 4.9
Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 14/105 (13%)
Query: 191 PIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPC----IPGWRSCASALL 246
P+H PP PP P LP PG + + ++ P +P + SC+
Sbjct: 254 PLHLPPIPPPLPL------LPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRAS 307
Query: 247 VRTLSLCKLSE----PPPAPASRLSWFLGPRSLLCPDLPGPDGNP 287
+ L ++ PPP P S+ P+ LP P P
Sbjct: 308 LPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPP 352
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 33.9 bits (76), Expect = 0.20
Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 24/147 (16%)
Query: 77 PGAASGTEVNAEAIPPPPDPQDERAFREESAVSQEGVTAVHSPLTTGPPGRRVACSEAGP 136
P A +N + PP P P+ E + G+ S GPP RR A G
Sbjct: 386 PPPAEPRTLNGVSSPPHPSPKSPVQLEEAPFSRRFGLLKTGSSGALGPPERRTAEGAPGA 445
Query: 137 ETPQHPWSLY-SGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPP 195
+ S + G + ++EL L T TP +LP E ++ + P
Sbjct: 446 GLQRSASSSWLEGTSTQAKELRLARIT-------PTPSPKLP-------EPSVLSEVTKP 491
Query: 196 PP------PPR---APRHAGRSGLPTA 213
PP PP P + +PTA
Sbjct: 492 PPCLENSSPPSRIPEPESPAKPNVPTA 518
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 33.9 bits (76), Expect = 0.20
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 178 HHRRCASEHNLFLPIHPPPPPPRAPRH 204
HH A H+ P PPPPPP P H
Sbjct: 149 HHHAAAHHHHHHHPPQPPPPPPPPPPH 175
Score = 29.3 bits (64), Expect = 4.9
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 178 HHRRCASEHNLF----LPIHPPPPPPRAPRHAGRSGLPTAHRP 216
HH A+ H+ P PPPPPP H PTA +P
Sbjct: 148 HHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQP 190
>gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens]
Length = 326
Score = 33.5 bits (75), Expect = 0.26
Identities = 38/142 (26%), Positives = 50/142 (35%), Gaps = 22/142 (15%)
Query: 175 RLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPC 234
R P+ RC HN + P PP + SGLP+ RRTS P
Sbjct: 155 RCPYGSRCHFIHNPSEDLAAPGHPPVLRQSISFSGLPSG------------RRTSPPPPG 202
Query: 235 IPGWRSCASALLVRTLSLCKLSEPPP---APASRLSWFLGPRSLLCPDLPGPDGNPDKLL 291
+ G +S S S PPP P S ++ P + L P P P
Sbjct: 203 LAGPSLSSS-------SFSPSSSPPPPGDLPLSPSAFSAAPGTPLARRDPTPVCCPSCRR 255
Query: 292 GAKVLTAGPLSNVFRHPDKMSV 313
+ GPL + R P S+
Sbjct: 256 ATPISVWGPLGGLVRTPSVQSL 277
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 33.5 bits (75), Expect = 0.26
Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 30/112 (26%)
Query: 179 HRRCASEHNLFL----------PIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRT 228
HR +EH L P PP PP P R PT+ PGR
Sbjct: 205 HRAATAEHQLGAGFSVRNGPGPPARLPPAPPGPPLRPARPHNPTSRGPGRL--------- 255
Query: 229 SKGRPCIPGWRSCASALLVRTLSLCK---LSEPPPAPASRLSWFLGPRSLLC 277
C P S L L LC+ + PPP RL P +LLC
Sbjct: 256 ---LTCEP-----PSRKLPPPLPLCRSRWVLAPPPTVRPRLRVLTPPFTLLC 299
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 33.5 bits (75), Expect = 0.26
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 18/102 (17%)
Query: 194 PPPPPPRAPRHAGRSGLPTAHRPGRQGL-VRGRRRTSKGRPCIPGWRSCASALLVR-TLS 251
PPPPPP PR LP PG + L ++ P +P R +S L R ++
Sbjct: 34 PPPPPPPTPRPPPPPPLPP---PGPRLLRACSLLLPTEPAPDLPPRRRSSSRSLARGRIT 90
Query: 252 LCKLSE----PPPAPASRLSWFLGPRSLLCPDLP--GPDGNP 287
C+++ PPPAP PR LLC LP GP G P
Sbjct: 91 QCQVAASPLVPPPAPPH------CPRPLLC-FLPAAGPAGLP 125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,579,473
Number of Sequences: 37866
Number of extensions: 1166716
Number of successful extensions: 9724
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 8617
Number of HSP's gapped (non-prelim): 1176
length of query: 322
length of database: 18,247,518
effective HSP length: 102
effective length of query: 220
effective length of database: 14,385,186
effective search space: 3164740920
effective search space used: 3164740920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.