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Search of human proteins with 169217530
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169217530 PREDICTED: similar to UPF0634 protein KIAA1641
[Homo sapiens]
(121 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169217530 PREDICTED: similar to UPF0634 protein KIAA1641 [Hom... 239 4e-64
gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 224 1e-59
gi|124517695 ankyrin repeat domain 36B [Homo sapiens] 224 1e-59
gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH po... 216 3e-57
gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH po... 209 3e-55
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 93 4e-20
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens] 49 7e-07
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo... 49 7e-07
gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo... 49 7e-07
gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens] 44 4e-05
gi|71061468 centromere protein E [Homo sapiens] 42 1e-04
gi|112420968 coiled-coil domain containing 158 [Homo sapiens] 41 2e-04
gi|15618995 keratin 71 [Homo sapiens] 36 0.006
gi|167614504 laminin, beta 1 precursor [Homo sapiens] 36 0.006
gi|38348344 hypothetical protein LOC374355 [Homo sapiens] 36 0.006
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 36 0.008
gi|194306559 kinesin light chain 1 isoform 3 [Homo sapiens] 35 0.013
gi|110735431 kinesin light chain 1 isoform 2 [Homo sapiens] 35 0.013
gi|33620730 kinesin light chain 1 isoform 1 [Homo sapiens] 35 0.013
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 35 0.013
gi|58530842 desmoplakin isoform II [Homo sapiens] 35 0.018
gi|58530840 desmoplakin isoform I [Homo sapiens] 35 0.018
gi|169217489 PREDICTED: similar to phosphodiesterase 4D interact... 35 0.018
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 35 0.018
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 35 0.018
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 35 0.018
gi|4504063 golgin 97 [Homo sapiens] 35 0.018
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 35 0.018
gi|192807309 TNFAIP3 interacting protein 3 [Homo sapiens] 34 0.023
gi|192807305 TNFAIP3 interacting protein 3 [Homo sapiens] 34 0.023
>gi|169217530 PREDICTED: similar to UPF0634 protein KIAA1641 [Homo
sapiens]
Length = 121
Score = 239 bits (610), Expect = 4e-64
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MCTHEEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQF 60
MCTHEEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQF
Sbjct: 1 MCTHEEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQF 60
Query: 61 QEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFE 120
QEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFE
Sbjct: 61 QEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFE 120
Query: 121 S 121
S
Sbjct: 121 S 121
>gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 1524
Score = 224 bits (571), Expect = 1e-59
Identities = 114/116 (98%), Positives = 116/116 (100%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 65
E++VAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD
Sbjct: 1409 EREVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 1468
Query: 66 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES 121
QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES
Sbjct: 1469 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES 1524
Score = 26.2 bits (56), Expect = 6.3
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 11 VRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTAT 70
+ +L+ ++D + N+ K L D + ++K + ++ + + L T
Sbjct: 1127 IARLRLEKDTIKNQNLEKKYLKD------------FEIVKRKHEDLQKALKRNGETLAKT 1174
Query: 71 IRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQ 110
I C G L E+ +R ++KQ + +RLE +Q
Sbjct: 1175 IAC---YSGQLAALTDENTTLRSKLEKQRESRQRLETEMQ 1211
>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
Length = 1121
Score = 224 bits (571), Expect = 1e-59
Identities = 114/116 (98%), Positives = 116/116 (100%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 65
E++VAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD
Sbjct: 1006 EREVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 1065
Query: 66 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES 121
QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES
Sbjct: 1066 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES 1121
Score = 26.2 bits (56), Expect = 6.3
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 11 VRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTAT 70
+ +L+ ++D + N+ K L D + ++K + ++ + + L T
Sbjct: 724 IARLRLEKDTIKNQNLEKKYLKD------------FEIVKRKHEDLQKALKRNGETLAKT 771
Query: 71 IRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQ 110
I C G L E+ +R ++KQ + +RLE +Q
Sbjct: 772 IAC---YSGQLAALTDENTTLRSKLEKQRESRQRLETEMQ 808
>gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 868
Score = 216 bits (551), Expect = 3e-57
Identities = 110/116 (94%), Positives = 114/116 (98%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 65
E++VAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD
Sbjct: 753 EREVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 812
Query: 66 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES 121
QLTATIRCTKEMEGD QKLEVE+VMMRKIIKKQD+QIER EKILQHSSLMLQVFES
Sbjct: 813 QLTATIRCTKEMEGDAQKLEVENVMMRKIIKKQDEQIERFEKILQHSSLMLQVFES 868
>gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 1430
Score = 209 bits (533), Expect = 3e-55
Identities = 107/116 (92%), Positives = 112/116 (96%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 65
E++VAVRQLQQK+DDVLNK SATKALLDASSRHC YLENGMQDSRKKLDQMRSQFQEIQD
Sbjct: 1315 EREVAVRQLQQKQDDVLNKRSATKALLDASSRHCIYLENGMQDSRKKLDQMRSQFQEIQD 1374
Query: 66 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES 121
QLTATIRCTKEMEGD QKLEVE+VMMRKIIKKQD+QIER EKILQHSSLMLQVFES
Sbjct: 1375 QLTATIRCTKEMEGDAQKLEVENVMMRKIIKKQDEQIERFEKILQHSSLMLQVFES 1430
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 93.2 bits (230), Expect = 4e-20
Identities = 48/109 (44%), Positives = 75/109 (68%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 65
E++V VRQLQQ+ D L K S ++A L+ +SR+ LE+ QD +KKL Q+R+Q QE QD
Sbjct: 1216 EREVVVRQLQQELADTLKKQSMSEASLEVTSRYRINLEDETQDLKKKLGQIRNQLQEAQD 1275
Query: 66 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSL 114
+ T +RC ++M+ QKLE ++ ++ +KKQ D+IE L+K L +++L
Sbjct: 1276 RHTEAVRCAEKMQDHKQKLEKDNAKLKVTVKKQMDKIEELQKNLLNANL 1324
Score = 32.7 bits (73), Expect = 0.067
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 42 LENGMQDSRKKLDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQ 101
LE +R L + + +Q L+ T KEME QK + E V + K I KQ+
Sbjct: 1076 LEIEFHHTRDALREKTLGLERVQKDLSQTQCQMKEME---QKYQNEQVKVNKYIGKQESV 1132
Query: 102 IERLEKILQHSSLMLQ 117
ERL ++ + L+ Q
Sbjct: 1133 EERLSQLQSENMLLRQ 1148
>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
Length = 917
Score = 49.3 bits (116), Expect = 7e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQ 59
EE++V RQLQ++ DD LNK +A+L+ SS LE+ Q +KKL QMRSQ
Sbjct: 851 EEREVVRRQLQREVDDALNKQLLLEAMLEISSERRINLEDEAQSLKKKLGQMRSQ 905
>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
sapiens]
Length = 917
Score = 49.3 bits (116), Expect = 7e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQ 59
EE++V RQLQ++ DD LNK +A+L+ SS LE+ Q +KKL QMRSQ
Sbjct: 851 EEREVVRRQLQREVDDALNKQLLLEAMLEISSERRINLEDEAQSLKKKLGQMRSQ 905
>gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo
sapiens]
Length = 917
Score = 49.3 bits (116), Expect = 7e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQ 59
EE++V RQLQ++ DD LNK +A+L+ SS LE+ Q +KKL QMRSQ
Sbjct: 851 EEREVVRRQLQREVDDALNKQLLLEAMLEISSERRINLEDEAQSLKKKLGQMRSQ 905
>gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens]
Length = 561
Score = 43.5 bits (101), Expect = 4e-05
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 65
E+ V VRQLQQ+ D L K + ++ L+ S + L+ Q +KKL Q+ SQF +
Sbjct: 395 ERVVVVRQLQQEAADSLKKLTMLESPLEGISHYHINLDE-TQVPKKKLFQVESQFDDFMA 453
Query: 66 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQ 117
+ A + + Q + E + M+K ++++ +++E +K+L+ L L+
Sbjct: 454 EKEAVSSKCVNLAKEIQVFQQELLSMKK-VQQECEKLEEDKKMLEEEILNLK 504
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 42.0 bits (97), Expect = 1e-04
Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQ--------- 55
+E + ++ L ++RD++ A + D H +Q+S+ K +Q
Sbjct: 1338 QESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDN 1397
Query: 56 ----MRSQFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQH 111
+ S+ ++ + + +A +R EM G +++L+ H M+ + K++DD ++RL+++LQ
Sbjct: 1398 ETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDD-LQRLQEVLQS 1456
Query: 112 SSLMLQ 117
S L+
Sbjct: 1457 ESDQLK 1462
Score = 31.6 bits (70), Expect = 0.15
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 32 LDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMM 91
L A+ L+ + +++KK+ +M ++I+DQ + E QKL E++
Sbjct: 1825 LKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLH-ENLEE 1883
Query: 92 RKIIKKQDDQIERLEKILQ 110
K + K+ D + R+E+ L+
Sbjct: 1884 MKSVMKERDNLRRVEETLK 1902
Score = 26.6 bits (57), Expect = 4.8
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 11 VRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTAT 70
+++ + RD L K L+ + + + L Q++ Q +DQL +
Sbjct: 892 LKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSD 951
Query: 71 IRCTKEMEGDTQK 83
I T M DTQ+
Sbjct: 952 IHDTVNMNIDTQE 964
>gi|112420968 coiled-coil domain containing 158 [Homo sapiens]
Length = 1113
Score = 40.8 bits (94), Expect = 2e-04
Identities = 28/110 (25%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLD----QMRSQFQ 61
E+ AV+ ++Q+RD +LN+ +++ L+ S L+ ++ ++++ +++ Q +
Sbjct: 643 ERLRAVKDIKQERDQLLNEVKTSRSELNNLSEEYEVLKRNFRNKSEEMEMTTNKLKMQLK 702
Query: 62 EIQDQLTATIRCTKEMEG-DTQKLEVEHVMMRKIIKKQDDQIERLEKILQ 110
Q +L T K MEG D ++V M ++I K+ QI+ L+ +Q
Sbjct: 703 SAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKR-GQIDALQSKIQ 751
>gi|15618995 keratin 71 [Homo sapiens]
Length = 523
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 3 THEEKKVAVRQLQQKRDDVLN----KGSATKALLDASSRHCTYLENGMQDSRKKLDQMRS 58
T E R +Q+ R ++ N + A+ DA R +N ++D+R KLD++
Sbjct: 344 TKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRG----DNALKDARAKLDELEG 399
Query: 59 QFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQD 99
+ +++L +R +E+ L++E RK+++ ++
Sbjct: 400 ALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLESEE 440
>gi|167614504 laminin, beta 1 precursor [Homo sapiens]
Length = 1786
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 65
E K+ + +Q +D+L K +ATK +D S+ L N ++ R L Q + I+
Sbjct: 1467 EAKLRADEAKQSAEDILLKTNATKEKMDKSNEE---LRNLIKQIRNFLTQDSADLDSIEA 1523
Query: 66 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSS 113
++ EM Q+L+ + + I+++ + + ++E ILQHS+
Sbjct: 1524 VANEVLK--MEMPSTPQQLQ----NLTEDIRERVESLSQVEVILQHSA 1565
>gi|38348344 hypothetical protein LOC374355 [Homo sapiens]
Length = 258
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/97 (21%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 32 LDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLE------ 85
L++ +H + E+ ++SR+ + ++RS+ ++++ + T+E+ + KLE
Sbjct: 3 LESLFQHIIFTEHQAEESRRLMREVRSEITRCREKIK---KATEELNEEKIKLESKVQQF 59
Query: 86 VEHVMMRKIIKKQDDQIER-LEKILQHSSLMLQVFES 121
E +++K ++ +E+ +I H +++LQ FE+
Sbjct: 60 FEKSFFLQLLKAHENALEKQYSEITNHRNMLLQTFEA 96
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 35.8 bits (81), Expect = 0.008
Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQ 64
E K+ RQ +Q R D+ + S+ D ++ LE + +++++MR+Q +E++
Sbjct: 1497 EAKEEFERQNKQLRADMEDLMSSK----DDVGKNVHELEKSKRALEQQVEEMRTQLEELE 1552
Query: 65 DQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKIL 109
D+L AT +E + Q ++ + + ++ +D+Q E +++L
Sbjct: 1553 DELQATEDAKLRLEVNMQAMKAQ---FERDLQTRDEQNEEKKRLL 1594
Score = 35.0 bits (79), Expect = 0.013
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTY----LENGMQDSRKKLDQMRSQF 60
EEK + QLQ + + + + +A L A + LE+ +++ ++ ++++
Sbjct: 887 EEKNILAEQLQAETE-LFAEAEEMRARLAAKKQELEEILHDLESRVEEEEERNQILQNEK 945
Query: 61 QEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLE----KILQHSSLM 115
+++Q + E EG QKL++E V IKK +++I LE K ++ LM
Sbjct: 946 KKMQAHIQDLEEQLDEEEGARQKLQLEKVTAEAKIKKMEEEILLLEDQNSKFIKEKKLM 1004
Score = 31.2 bits (69), Expect = 0.19
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 10 AVRQLQQKRDD----VLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQD 65
A R +Q+RD+ + N S ALLD R LE + ++L++ +S + + D
Sbjct: 1702 ARRHAEQERDELADEITNSASGKSALLDEKRR----LEARIAQLEEELEEEQSNMELLND 1757
Query: 66 QLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFE 120
+ T ++ DT L E R +K D+ ++LE+ + LQ E
Sbjct: 1758 RFRKT-----TLQVDT--LNAELAAERSAAQKSDNARQQLERQNKELKAKLQELE 1805
Score = 28.9 bits (63), Expect = 0.97
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 11 VRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTAT 70
+ QL+++ + + +A L+ + + + ++D R+ DQ + Q ++ ++
Sbjct: 1823 IGQLEEQLEQEAKERAAANKLVRRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQL 1882
Query: 71 IRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLM 115
R +E E + + RK+ ++ DD E E + + S +
Sbjct: 1883 KRQLEEAEEEATRANASR---RKLQRELDDATEANEGLSREVSTL 1924
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/98 (17%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 11 VRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTAT 70
+RQL+++++ + + + + L++ + D++KK+D + +++ A
Sbjct: 1338 IRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEE---AK 1394
Query: 71 IRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKI 108
+ K+ E +Q+LE + + K+ K ++ + L+ +
Sbjct: 1395 KKLLKDAEALSQRLEEKALAYDKLEKTKNRLQQELDDL 1432
>gi|194306559 kinesin light chain 1 isoform 3 [Homo sapiens]
Length = 618
Score = 35.0 bits (79), Expect = 0.013
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQ 64
EEK +R K ++L G + ++ A S H +E+ Q R ++ ++ + Q ++
Sbjct: 66 EEKSNMIR----KSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLR 121
Query: 65 DQLTATIRCTKEMEGDTQKLEVE--HVMMRKIIKKQDDQIERLE 106
D+L T + ++ E +LE E H+ +KK DD I E
Sbjct: 122 DELANTQQKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSE 165
>gi|110735431 kinesin light chain 1 isoform 2 [Homo sapiens]
Length = 573
Score = 35.0 bits (79), Expect = 0.013
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQ 64
EEK +R K ++L G + ++ A S H +E+ Q R ++ ++ + Q ++
Sbjct: 66 EEKSNMIR----KSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLR 121
Query: 65 DQLTATIRCTKEMEGDTQKLEVE--HVMMRKIIKKQDDQIERLE 106
D+L T + ++ E +LE E H+ +KK DD I E
Sbjct: 122 DELANTQQKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSE 165
>gi|33620730 kinesin light chain 1 isoform 1 [Homo sapiens]
Length = 560
Score = 35.0 bits (79), Expect = 0.013
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQ 64
EEK +R K ++L G + ++ A S H +E+ Q R ++ ++ + Q ++
Sbjct: 66 EEKSNMIR----KSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLR 121
Query: 65 DQLTATIRCTKEMEGDTQKLEVE--HVMMRKIIKKQDDQIERLE 106
D+L T + ++ E +LE E H+ +KK DD I E
Sbjct: 122 DELANTQQKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSE 165
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 35.0 bits (79), Expect = 0.013
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 37 RHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEVE----HVMMR 92
+HC+ LE QD KLD+ + +E QD+L A + + E T+ L E +
Sbjct: 524 QHCSILET--QDPCLKLDETSPRGEEYQDKLAAEEGTSSDEEERTKVLLKEGSDPQPPLG 581
Query: 93 KIIKKQDDQIERLEKILQHSSLMLQ 117
++K++ +I+RLE+ Q LQ
Sbjct: 582 SLLKEKTSKIQRLEEDWQSQKAKLQ 606
>gi|58530842 desmoplakin isoform II [Homo sapiens]
Length = 2272
Score = 34.7 bits (78), Expect = 0.018
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 40 TYLENGMQDSRKKLDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQD 99
TY + RK ++ Q + DQL +C KE G QKLE E K IK+++
Sbjct: 1115 TYEIEDEKRRRKSVEDRFDQQKNDYDQLQKARQCEKENLG-WQKLESE-----KAIKEKE 1168
Query: 100 DQIERLEKILQHSSLMLQVFES 121
+IERL +LQ + +E+
Sbjct: 1169 YEIERLRVLLQEEGTRKREYEN 1190
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 34.7 bits (78), Expect = 0.018
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 40 TYLENGMQDSRKKLDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQD 99
TY + RK ++ Q + DQL +C KE G QKLE E K IK+++
Sbjct: 1115 TYEIEDEKRRRKSVEDRFDQQKNDYDQLQKARQCEKENLG-WQKLESE-----KAIKEKE 1168
Query: 100 DQIERLEKILQHSSLMLQVFES 121
+IERL +LQ + +E+
Sbjct: 1169 YEIERLRVLLQEEGTRKREYEN 1190
Score = 32.3 bits (72), Expect = 0.087
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 36 SRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKII 95
S+ T + + + L +++ Q Q+++++L R E +KLE E MR+ +
Sbjct: 1546 SQERTVKDQDITRFQNSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSL 1605
Query: 96 KKQDDQIERLEKILQHSSLM 115
K+Q +I L + L+ +S++
Sbjct: 1606 KEQAIKITNLTQQLEQASIV 1625
>gi|169217489 PREDICTED: similar to phosphodiesterase 4D interacting
protein [Homo sapiens]
Length = 211
Score = 34.7 bits (78), Expect = 0.018
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 6 EKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENG---MQDSRKKLDQMRSQFQE 62
EK +R +Q + + S + LL Y +N ++ + L+++R Q
Sbjct: 28 EKYNEIRTQEQNIQHLNHSLSHKEQLLQEFRELLQYRDNSDKTLEANEMLLEKLR---QR 84
Query: 63 IQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQVFES 121
I+D+ A R E ++ E E +R ++++D +ERL +L + +Q ES
Sbjct: 85 IRDKAVALERAIDEKFSALEEKEKELRQLRLAVRERDHDLERLRDVLSSNEATMQTMES 143
Score = 27.3 bits (59), Expect = 2.8
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 53 LDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHS 112
++++R Q++Q+ E++ +Q+L I+ Q+ I+ L L H
Sbjct: 1 MEELRKALQQLQE----------ELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHK 50
Query: 113 SLMLQVF 119
+LQ F
Sbjct: 51 EQLLQEF 57
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 34.7 bits (78), Expect = 0.018
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 11 VRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTAT 70
+RQLQQ+ +LN+ + ++ +R TYL + RK+LDQ+ + E+++ T
Sbjct: 804 IRQLQQENRQLLNERIKLEGII---TRVETYLNENL---RKRLDQVEQELNELRETEGGT 857
Query: 71 IRCTKEMEGDTQKLEVEHVMMR-----KIIKKQDDQIERLEKILQ 110
+ E + V+ M R I K + I+ L+K ++
Sbjct: 858 VLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME 902
Score = 28.5 bits (62), Expect = 1.3
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 3 THEEKKVAVRQLQQ----KRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRS 58
T EK +R QQ K +D+ + K + A L Q+ K+ ++
Sbjct: 248 TSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLEL 307
Query: 59 QFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIE 103
+ +++QD+L K + + QKL + KI +KQ + E
Sbjct: 308 KAKDLQDELAGNSEQRKRLLKERQKL------LEKIEEKQKELAE 346
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 34.7 bits (78), Expect = 0.018
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 14/118 (11%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSR-HCTYLEN-GMQDSRKKLDQMRSQFQE 62
EE KVA+ Q ++ R + + LLDAS R + +N + +++KKL+ + +
Sbjct: 1690 EEMKVALEQTERTRR------LSEQELLDASDRVQLLHSQNTSLINTKKKLE---ADIAQ 1740
Query: 63 IQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDD---QIERLEKILQHSSLMLQ 117
Q ++ +I+ ++ E +K + MM + +KK+ D +ER++K L+ + LQ
Sbjct: 1741 CQAEVENSIQESRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQ 1798
Score = 30.8 bits (68), Expect = 0.25
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 13 QLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQDQLTATIR 72
+L+Q+ DD+ K L R LE ++ S++ + + + Q+I+++L
Sbjct: 1030 KLEQQTDDLEGSLEQEKKLRADLERAKRKLEGDLKMSQESIMDLENDKQQIEEKLKKKEF 1089
Query: 73 CTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQ 110
+++ +V + +K IK+ +IE LE+ ++
Sbjct: 1090 ELSQLQAKIDDEQVHSLQFQKKIKELQARIEELEEEIE 1127
Score = 28.5 bits (62), Expect = 1.3
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSR------HCTYLENGMQDSRKKL---DQ 55
EEK V++ LQ+K D L S T+ L+DA R LE +++ ++L ++
Sbjct: 878 EEKMVSL--LQEKNDLQLQVQSETENLMDAEERCEGLIKSKILLEAKVKELTERLEEEEE 935
Query: 56 MRSQF----QEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEK 107
M S+ + ++D+ ++ R ++E K+E E +K +++ LE+
Sbjct: 936 MNSELVAKKRNLEDKCSSLKRDIDDLELTLTKVEKEKHATENKVKNLSEEMTALEE 991
Score = 27.7 bits (60), Expect = 2.2
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQ 64
E A L +K+ + + K LD S + + +L +MR+ ++E+
Sbjct: 1437 ERSHTACATLDKKQRNFDKVLAEWKQKLDESQAELEAAQKESRSLSTELFKMRNAYEEVV 1496
Query: 65 DQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQV 118
DQL R K ++ + L + K ++ + E+ +K+++ LQV
Sbjct: 1497 DQLETLRRENKNLQEEISDLTEQIAETGKNLQ----EAEKTKKLVEQEKSDLQV 1546
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 34.7 bits (78), Expect = 0.018
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 46 MQDSRKKLDQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERL 105
+Q ++K D ++ QF++ +QL I+ KE Q+L E + + ++E L
Sbjct: 1520 LQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEEL 1579
Query: 106 EKILQHSSLMLQ 117
+ + LM+Q
Sbjct: 1580 TRQNNETKLMMQ 1591
Score = 30.8 bits (68), Expect = 0.25
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEIQ 64
E K +L+Q+ D++ +A + R TY N +Q + ++ ++
Sbjct: 1355 EHDKQKAEELKQQVDEL----TAANRKAEQDMRELTYELNALQLEKTSSEEKARLLKDKL 1410
Query: 65 DQLTATIRCTK-EMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSS 113
D+ T+RC K E+E Q + +R++ ++ + + E+ +Q +S
Sbjct: 1411 DETNNTLRCLKLELERKDQAEKGYSQQLRELGRQLNQTTGKAEEAMQEAS 1460
>gi|4504063 golgin 97 [Homo sapiens]
Length = 767
Score = 34.7 bits (78), Expect = 0.018
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Query: 5 EEKKVAVRQLQQKRDDVLNKGSATKALLDASSRH----CTYLENGMQDSRKKLDQMRSQF 60
E K A+ Q +Q+ ++ + S + A ++ T+L+ + K+L+Q S
Sbjct: 255 ESKITALEQKEQELQALIQQLSIDLQKVTAETQEKEDVITHLQEKVASLEKRLEQNLSGE 314
Query: 61 QEIQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQ 117
+ +Q+ L + +E Q+L K I + ++ LE+ LQ S LQ
Sbjct: 315 EHVQELLKEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEEQLQ 371
Score = 33.5 bits (75), Expect = 0.039
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 3 THEEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQE 62
TH ++KVA L+++ + L+ + LL + T E ++D+R++L RS +
Sbjct: 294 THLQEKVA--SLEKRLEQNLSGEEHVQELL----KEKTLAEQNLEDTRQQLLAARSSQAK 347
Query: 63 IQDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQ 117
+ L +R E+E Q E + + I+ Q+ QI+ L Q SS + Q
Sbjct: 348 AINTLETRVR---ELEQTLQASEEQLQQSKGIVAAQETQIQELAAANQESSHVQQ 399
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 34.7 bits (78), Expect = 0.018
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 4 HEEKKVAVRQLQQKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEI 63
H++ KV + LQ K + + K S ++ +++ L+ + ++R L + + +
Sbjct: 951 HDKMKVDMSGLQAKNEILSEKLSNAESKINS-------LQIQLHNTRDALGRESLILERV 1003
Query: 64 QDQLTATIRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERLEKILQHSSLMLQ 117
Q L+ T KE E Q ++E ++K I KQ+ ERL ++ + L+ Q
Sbjct: 1004 QRDLSQTQCQKKETE---QMYQIEQSKLKKYIAKQESVEERLSQLQSENMLLRQ 1054
>gi|192807309 TNFAIP3 interacting protein 3 [Homo sapiens]
Length = 325
Score = 34.3 bits (77), Expect = 0.023
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 29 KALLDASSRHCTYLENGMQDSRKKL--DQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEV 86
KAL DA + C++ E+ ++ SR + ++MR++ + ++ Q+ K+ D ++L
Sbjct: 164 KALQDALNIKCSFSEDCLRKSRVEFCHEEMRTEMEVLKQQVQIYEEDFKKERSDRERLNQ 223
Query: 87 EHVMMRKIIKKQDDQIERL 105
E +++I + Q+ RL
Sbjct: 224 EKEELQQINETSQSQLNRL 242
>gi|192807305 TNFAIP3 interacting protein 3 [Homo sapiens]
Length = 325
Score = 34.3 bits (77), Expect = 0.023
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 29 KALLDASSRHCTYLENGMQDSRKKL--DQMRSQFQEIQDQLTATIRCTKEMEGDTQKLEV 86
KAL DA + C++ E+ ++ SR + ++MR++ + ++ Q+ K+ D ++L
Sbjct: 164 KALQDALNIKCSFSEDCLRKSRVEFCHEEMRTEMEVLKQQVQIYEEDFKKERSDRERLNQ 223
Query: 87 EHVMMRKIIKKQDDQIERL 105
E +++I + Q+ RL
Sbjct: 224 EKEELQQINETSQSQLNRL 242
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.127 0.339
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,726,342
Number of Sequences: 37866
Number of extensions: 131543
Number of successful extensions: 1649
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 1087
Number of HSP's gapped (non-prelim): 701
length of query: 121
length of database: 18,247,518
effective HSP length: 89
effective length of query: 32
effective length of database: 14,877,444
effective search space: 476078208
effective search space used: 476078208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.