Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KLC1 Sequence: fasta or formatted (560aa) NCBI GI: 33620730
Description:

kinesin light chain 1 isoform 1

Referenced in:

Kinesins
Tetratricopeptide Domains

Other entries for this name:
alt prot [573aa] kinesin light chain 1 isoform 2
alt prot [618aa] kinesin light chain 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         43           5
 C cysteine            1.4          8           1
 D aspartate           6.4         36           3
 E glutamate          10.5         59           3
 F phenylalanine       1.1          6           1
 G glycine             5.2         29           2
 H histidine           2.1         12           1
 I isoleucine          2.9         16           2
 K lysine             10.0         56           2
 L leucine            11.4         64           2
 M methionine          2.7         15           2
 N asparagine          5.7         32           2
 P proline             2.9         16           1
 Q glutamine           6.4         36           3
 R arginine            4.6         26           2
 S serine              5.2         29           2
 T threonine           3.9         22           3
 V valine              5.4         30           2
 W tryptophan          0.7          4           1
 Y tyrosine            3.8         21           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin light chain 1 isoform 1 
KLC1                  0.983   kinesin light chain 1 isoform 3 
KLC1                  0.983   kinesin light chain 1 isoform 2 
KLC4                  0.679   kinesin-like 8 isoform b 
KLC4                  0.679   kinesin-like 8 isoform a 
KLC4                  0.679   kinesin-like 8 isoform a 
KLC2                  0.656   kinesin light chain 2 isoform 1 
KLC2                  0.656   kinesin light chain 2 isoform 1 
KLC2                  0.656   kinesin light chain 2 isoform 1 
KLC2                  0.501   kinesin light chain 2 isoform 2 
KLC3                  0.447   kinesin light chain 3 
KLC4                  0.344   kinesin-like 8 isoform c 
NPHP3                 0.121   nephrocystin 3 
KIAA0664              0.037   hypothetical protein LOC23277 
APPBP2                0.033   amyloid beta precursor protein-binding protein 2 [Ho...
TTC19                 0.028   tetratricopeptide repeat domain 19 
OGT                   0.026   O-linked GlcNAc transferase isoform 2 
OGT                   0.026   O-linked GlcNAc transferase isoform 1 
CCDC110               0.023   coiled-coil domain containing 110 isoform b 
CCDC110               0.023   coiled-coil domain containing 110 isoform a 
CLIP1                 0.023   restin isoform b 
CLIP1                 0.023   restin isoform a 
TMTC1                 0.023   transmembrane and tetratricopeptide repeat containin...
CNTLN                 0.022   centlein isoform 1 
STIP1                 0.021   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
CEP110                0.020   centrosomal protein 110kDa 
GOLGB1                0.020   golgi autoantigen, golgin subfamily b, macrogolgin ...
KIF16B                0.020   kinesin-like motor protein C20orf23 
TTC28                 0.019   tetratricopeptide repeat domain 28 
CCDC147               0.019   coiled-coil domain containing 147 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press