Guide to the Human Genome
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Name: KLC1 Sequence: fasta or formatted (573aa) NCBI GI: 110735431
Description:

kinesin light chain 1 isoform 2

Referenced in:

Kinesins
Tetratricopeptide Domains

Other entries for this name:
alt prot [618aa] kinesin light chain 1 isoform 3
alt prot [560aa] kinesin light chain 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         44           5
 C cysteine            1.6          9           1
 D aspartate           6.3         36           3
 E glutamate          10.3         59           3
 F phenylalanine       1.2          7           1
 G glycine             5.6         32           2
 H histidine           2.3         13           1
 I isoleucine          2.8         16           2
 K lysine              9.6         55           2
 L leucine            10.8         62           2
 M methionine          2.3         13           2
 N asparagine          5.4         31           2
 P proline             3.0         17           1
 Q glutamine           7.0         40           4
 R arginine            5.2         30           2
 S serine              5.4         31           2
 T threonine           3.8         22           3
 V valine              5.2         30           2
 W tryptophan          0.9          5           1
 Y tyrosine            3.7         21           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin light chain 1 isoform 2 
KLC1                  0.955   kinesin light chain 1 isoform 3 
KLC1                  0.955   kinesin light chain 1 isoform 1 
KLC4                  0.662   kinesin-like 8 isoform b 
KLC4                  0.662   kinesin-like 8 isoform a 
KLC4                  0.662   kinesin-like 8 isoform a 
KLC2                  0.639   kinesin light chain 2 isoform 1 
KLC2                  0.639   kinesin light chain 2 isoform 1 
KLC2                  0.639   kinesin light chain 2 isoform 1 
KLC2                  0.490   kinesin light chain 2 isoform 2 
KLC3                  0.435   kinesin light chain 3 
KLC4                  0.334   kinesin-like 8 isoform c 
NPHP3                 0.118   nephrocystin 3 
KIAA0664              0.036   hypothetical protein LOC23277 
APPBP2                0.032   amyloid beta precursor protein-binding protein 2 [Ho...
TTC19                 0.028   tetratricopeptide repeat domain 19 
OGT                   0.025   O-linked GlcNAc transferase isoform 2 
OGT                   0.025   O-linked GlcNAc transferase isoform 1 
CCDC110               0.022   coiled-coil domain containing 110 isoform b 
CCDC110               0.022   coiled-coil domain containing 110 isoform a 
CLIP1                 0.022   restin isoform b 
CLIP1                 0.022   restin isoform a 
TMTC1                 0.022   transmembrane and tetratricopeptide repeat containin...
CNTLN                 0.021   centlein isoform 1 
STIP1                 0.020   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
CEP110                0.020   centrosomal protein 110kDa 
GOLGB1                0.020   golgi autoantigen, golgin subfamily b, macrogolgin ...
KIF16B                0.020   kinesin-like motor protein C20orf23 
TTC28                 0.019   tetratricopeptide repeat domain 28 
CCDC147               0.019   coiled-coil domain containing 147 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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