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Search of human proteins with 169216125
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169216125 PREDICTED: hypothetical protein [Homo sapiens]
(309 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169216125 PREDICTED: hypothetical protein [Homo sapiens] 653 0.0
gi|169217599 PREDICTED: hypothetical protein [Homo sapiens] 560 e-160
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|148596968 tripartite motif-containing 8 [Homo sapiens] 39 0.006
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 38 0.013
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 37 0.017
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 37 0.017
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 37 0.017
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 37 0.022
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 37 0.022
gi|71999153 hypothetical protein LOC23334 [Homo sapiens] 37 0.029
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 36 0.038
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 36 0.038
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 35 0.065
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 35 0.065
gi|39995080 hypothetical protein LOC79567 [Homo sapiens] 35 0.084
gi|110815800 WD repeat domain 32 [Homo sapiens] 35 0.11
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 35 0.11
gi|186910323 hypothetical protein LOC79969 isoform 2 [Homo sapiens] 35 0.11
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 35 0.11
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 34 0.19
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 34 0.19
gi|40804761 nanos homolog 1 [Homo sapiens] 34 0.19
gi|144953905 hypothetical protein LOC55138 [Homo sapiens] 34 0.19
gi|61966923 forkhead box B2 [Homo sapiens] 34 0.19
gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens] 33 0.25
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 33 0.25
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 33 0.25
>gi|169216125 PREDICTED: hypothetical protein [Homo sapiens]
Length = 309
Score = 653 bits (1684), Expect = 0.0
Identities = 309/309 (100%), Positives = 309/309 (100%)
Query: 1 MAAPLQASMTSGLGNVPPSELEGHWFPPAGNRNTVSPSFLQDPRLSSELPESSGCGNLYK 60
MAAPLQASMTSGLGNVPPSELEGHWFPPAGNRNTVSPSFLQDPRLSSELPESSGCGNLYK
Sbjct: 1 MAAPLQASMTSGLGNVPPSELEGHWFPPAGNRNTVSPSFLQDPRLSSELPESSGCGNLYK 60
Query: 61 PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPTPRSP 120
PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPTPRSP
Sbjct: 61 PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPTPRSP 120
Query: 121 RRESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIH 180
RRESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIH
Sbjct: 121 RRESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIH 180
Query: 181 PPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLC 240
PPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLC
Sbjct: 181 PPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLC 240
Query: 241 KLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSV 300
KLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSV
Sbjct: 241 KLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSV 300
Query: 301 FTAAVNFLP 309
FTAAVNFLP
Sbjct: 301 FTAAVNFLP 309
>gi|169217599 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 560 bits (1444), Expect = e-160
Identities = 281/345 (81%), Positives = 282/345 (81%), Gaps = 59/345 (17%)
Query: 1 MAAPLQASMTSGLGNVPPSELEGHWFPPAGNRNTVSPSFLQDPRLSSELPESSGCGNLYK 60
MAAPLQASMTSGLGNVPPSELEGHWFPPAGNR GNLYK
Sbjct: 1 MAAPLQASMTSGLGNVPPSELEGHWFPPAGNR-----------------------GNLYK 37
Query: 61 PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPTP--- 117
PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPP P
Sbjct: 38 PTNTSSLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPPPDPQ 97
Query: 118 --RSPRRESV-------------------------------PQHPWSLYSGLTVSSQELD 144
R+ R ES PQHPWSLYSGLTVSSQELD
Sbjct: 98 DERAFREESAVSQEGVTAVHSPLTTGPPGRRVACSEAGPETPQHPWSLYSGLTVSSQELD 157
Query: 145 LCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPG 204
LCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPG
Sbjct: 158 LCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPG 217
Query: 205 RQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLC 264
RQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLC
Sbjct: 218 RQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLC 277
Query: 265 PDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSVFTAAVNFLP 309
PDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSVFTAAVNFLP
Sbjct: 278 PDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMSVFTAAVNFLP 322
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 43.5 bits (101), Expect = 2e-04
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 17/138 (12%)
Query: 164 PHHRRCASEHNLFLPIHPPPP-----PPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKG 218
P +R A+ L P P PP PPR H P+AH PG RG R +G
Sbjct: 137 PEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPG-----RGSGRVPRG 191
Query: 219 RPCIPGWRSCASALLVRTLSLCKL-------SEPPPAPASRLSWFLGPRSLLCPDLPGPD 271
+P W +S L S+ L P PAP +R G R + P
Sbjct: 192 QPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAAR 251
Query: 272 GNPDKLLGAKVLTAGPLS 289
G+ + A++L A +S
Sbjct: 252 GSAQQPPLARLLLASAVS 269
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 43.5 bits (101), Expect = 2e-04
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 17/138 (12%)
Query: 164 PHHRRCASEHNLFLPIHPPPP-----PPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKG 218
P +R A+ L P P PP PPR H P+AH PG RG R +G
Sbjct: 137 PEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPG-----RGSGRVPRG 191
Query: 219 RPCIPGWRSCASALLVRTLSLCKL-------SEPPPAPASRLSWFLGPRSLLCPDLPGPD 271
+P W +S L S+ L P PAP +R G R + P
Sbjct: 192 QPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAAR 251
Query: 272 GNPDKLLGAKVLTAGPLS 289
G+ + A++L A +S
Sbjct: 252 GSAQQPPLARLLLASAVS 269
>gi|148596968 tripartite motif-containing 8 [Homo sapiens]
Length = 551
Score = 38.9 bits (89), Expect = 0.006
Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 5/124 (4%)
Query: 92 PLG----TVHRVPGAASGTEVNAEAIPPTPRSPRRESVPQHPWSLYSGLTVSSQELDLCF 147
PLG T H V V++ + P + P + Q Y G + +D C+
Sbjct: 415 PLGPCSSTQHLVALPGGAQPVHSSPVFPPSQYPNGSAAQQPMLPQYGGRKILVCSVDNCY 474
Query: 148 CTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRA-PRHAGRSGLPTAHRPGRQ 206
C+++ P R H P+ P P P++ P A R L + +PG Q
Sbjct: 475 CSSVANHGGHQPYPRSGHFPWTVPSQEYSHPLPPTPSVPQSLPSLAVRDWLDASQQPGHQ 534
Query: 207 GLVR 210
R
Sbjct: 535 DFYR 538
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 37.7 bits (86), Expect = 0.013
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 13/120 (10%)
Query: 154 KRLQTPGARLPHHR---RCASEHNLFLPI---HPPPPPPRAPRHAGRSGLPTAHRPGRQG 207
K L PG RL + C L L + H PP P P++A R R R
Sbjct: 339 KLLDVPGRRLEPQQPLGHCPLAEPLRLDLCSPHGPPGPEGHPKYALR-------RTDRPK 391
Query: 208 LVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGPRSLLCPDL 267
++ RR+ +GR G L + T + L+EPPP P GP + P+L
Sbjct: 392 ILCRRRKAGRGRKADAGPEGRLLPLPMPTGLVAALAEPPPPPPPPPPALPGPGPVSVPEL 451
>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
sapiens]
Length = 1235
Score = 37.4 bits (85), Expect = 0.017
Identities = 46/186 (24%), Positives = 67/186 (36%), Gaps = 28/186 (15%)
Query: 37 PSFLQDP--RLSSELPESSGCGNLYKPTNTSSLFL-----PLGPWRLLRGPNGTWRKAFI 89
P L+DP +++ +P+ L P+ L P P + P G
Sbjct: 292 PVVLKDPCPQVAQPIPQPQTEPQLRAPSPDPDLVQRTEAPPQPPPLSTQPPQGPPEAQLQ 351
Query: 90 TSPLGTVHRVPGAASGTEVNAEAIPPTPRSPRRESVPQHPWSLYSGLTVSSQELDLCFCT 149
+P V R P S T++ + +PP P +S+ Q P S Y+ ++S
Sbjct: 352 PAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQ-PLSAYNSSSLS--------LN 402
Query: 150 NITEKRLQTPGARLP-----HHRRCASEHNLFLPIH-------PPPPPPRAPRHAGRSGL 197
+++ R TP P H AS L LP H P PP H
Sbjct: 403 SLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAP 462
Query: 198 PTAHRP 203
PTA P
Sbjct: 463 PTALPP 468
>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
sapiens]
Length = 1259
Score = 37.4 bits (85), Expect = 0.017
Identities = 46/186 (24%), Positives = 67/186 (36%), Gaps = 28/186 (15%)
Query: 37 PSFLQDP--RLSSELPESSGCGNLYKPTNTSSLFL-----PLGPWRLLRGPNGTWRKAFI 89
P L+DP +++ +P+ L P+ L P P + P G
Sbjct: 292 PVVLKDPCPQVAQPIPQPQTEPQLRAPSPDPDLVQRTEAPPQPPPLSTQPPQGPPEAQLQ 351
Query: 90 TSPLGTVHRVPGAASGTEVNAEAIPPTPRSPRRESVPQHPWSLYSGLTVSSQELDLCFCT 149
+P V R P S T++ + +PP P +S+ Q P S Y+ ++S
Sbjct: 352 PAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQ-PLSAYNSSSLS--------LN 402
Query: 150 NITEKRLQTPGARLP-----HHRRCASEHNLFLPIH-------PPPPPPRAPRHAGRSGL 197
+++ R TP P H AS L LP H P PP H
Sbjct: 403 SLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAP 462
Query: 198 PTAHRP 203
PTA P
Sbjct: 463 PTALPP 468
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 37.4 bits (85), Expect = 0.017
Identities = 41/131 (31%), Positives = 49/131 (37%), Gaps = 8/131 (6%)
Query: 70 PLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPTPRSPRRESVPQHP 129
PL P R G+ + I L + P AASG A PP RSP +S P
Sbjct: 106 PLEPGGAGRAEQGSTLRRRIREHLLPAVKGPAAASGA---AGGTPPGGRSP--DSAPSSS 160
Query: 130 WSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLP--IHPPPPPPR 187
S S L+ S Q R Q PGA L H + + L + PPPPP
Sbjct: 161 -SASSSLSSSPQPPPRGDRARDEGARRQGPGAHLCHQKSSSLPGTACLEQLLEPPPPPAE 219
Query: 188 APRHAGRSGLP 198
R S P
Sbjct: 220 PARSPAESRAP 230
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 37.0 bits (84), Expect = 0.022
Identities = 40/136 (29%), Positives = 50/136 (36%), Gaps = 51/136 (37%)
Query: 115 PTPRSPRRESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHN 174
P+PR+ R P+ PWSLY +PG R P +
Sbjct: 279 PSPRASPRPWTPEDPWSLYG----------------------PSPGGRGP--------ED 308
Query: 175 LFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLV 234
+L + P P P +PR A G RR +S G P S AS L
Sbjct: 309 SWLLLSAPGPTPASPRPASPCG--------------KRRYSSSGTP------SSASPALS 348
Query: 235 RTLSLCKL-SEPPPAP 249
R SL + SEPPP P
Sbjct: 349 RRGSLGEEGSEPPPPP 364
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 37.0 bits (84), Expect = 0.022
Identities = 40/136 (29%), Positives = 50/136 (36%), Gaps = 51/136 (37%)
Query: 115 PTPRSPRRESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHN 174
P+PR+ R P+ PWSLY +PG R P +
Sbjct: 216 PSPRASPRPWTPEDPWSLYG----------------------PSPGGRGP--------ED 245
Query: 175 LFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLV 234
+L + P P P +PR A G RR +S G P S AS L
Sbjct: 246 SWLLLSAPGPTPASPRPASPCG--------------KRRYSSSGTP------SSASPALS 285
Query: 235 RTLSLCKL-SEPPPAP 249
R SL + SEPPP P
Sbjct: 286 RRGSLGEEGSEPPPPP 301
>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
Length = 2533
Score = 36.6 bits (83), Expect = 0.029
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 156 LQTPGARLPHHRRCASEHNLFLP--------------IHPPPPPPRAPRHAGRSGLPTAH 201
++ P A P H R SE + P + PP PPP RH G S L T H
Sbjct: 728 VELPTASDPQHHRSTSESSASFPRSPGQPSSLRSDDGLGPPLPPPEEERHPGLSNLATPH 787
Query: 202 R 202
R
Sbjct: 788 R 788
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 36.2 bits (82), Expect = 0.038
Identities = 50/183 (27%), Positives = 62/183 (33%), Gaps = 37/183 (20%)
Query: 70 PLGPWRLLRGPN--GTWRKAFITSPLGTVHRV------PGAASGTEVNAEAIPPTPRSPR 121
P W L P GTW F + G H+ GA + A P PR R
Sbjct: 326 PASTWALAARPRAGGTWTSRF-EAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQR 384
Query: 122 RESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTP-----GARLPHHRRCASEHNLF 176
+P+ + L + C + + P GA P H R
Sbjct: 385 PRRLPR------ASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQ-- 436
Query: 177 LPIHPPPPPPRAPR--------HAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSC 228
P P PRAPR HAG S PG G R RRR ++GR C+ RS
Sbjct: 437 ----DPEPGPRAPRGGPASSGWHAG-SAAGRGWDPG--GGSRARRRAARGRGCLRSARSS 489
Query: 229 ASA 231
A
Sbjct: 490 PHA 492
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 36.2 bits (82), Expect = 0.038
Identities = 50/183 (27%), Positives = 62/183 (33%), Gaps = 37/183 (20%)
Query: 70 PLGPWRLLRGPN--GTWRKAFITSPLGTVHRV------PGAASGTEVNAEAIPPTPRSPR 121
P W L P GTW F + G H+ GA + A P PR R
Sbjct: 326 PASTWALAARPRAGGTWTSRF-EAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQR 384
Query: 122 RESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTP-----GARLPHHRRCASEHNLF 176
+P+ + L + C + + P GA P H R
Sbjct: 385 PRRLPR------ASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQ-- 436
Query: 177 LPIHPPPPPPRAPR--------HAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSC 228
P P PRAPR HAG S PG G R RRR ++GR C+ RS
Sbjct: 437 ----DPEPGPRAPRGGPASSGWHAG-SAAGRGWDPG--GGSRARRRAARGRGCLRSARSS 489
Query: 229 ASA 231
A
Sbjct: 490 PHA 492
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 35.4 bits (80), Expect = 0.065
Identities = 44/143 (30%), Positives = 52/143 (36%), Gaps = 25/143 (17%)
Query: 115 PTPRSPRRESVP--QHPWSLY-SGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCAS 171
P P + RR P W Y G S+ C C R ++P + P H AS
Sbjct: 49 PGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGAS 108
Query: 172 EHNLFLPIHPPPPPPR-APRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCAS 230
PPPPPPR A AG P PG L RR +P R C S
Sbjct: 109 A--------PPPPPPRLAQPRAG----PAPPPPGPPSL----RRAPINQP-----RRCQS 147
Query: 231 ALLVRTLSLCKLSEPPPAPASRL 253
+ C PAPAS+L
Sbjct: 148 SGGSPRRCHCSSVPGAPAPASQL 170
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 35.4 bits (80), Expect = 0.065
Identities = 44/143 (30%), Positives = 52/143 (36%), Gaps = 25/143 (17%)
Query: 115 PTPRSPRRESVP--QHPWSLY-SGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCAS 171
P P + RR P W Y G S+ C C R ++P + P H AS
Sbjct: 49 PGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGAS 108
Query: 172 EHNLFLPIHPPPPPPR-APRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCAS 230
PPPPPPR A AG P PG L RR +P R C S
Sbjct: 109 A--------PPPPPPRLAQPRAG----PAPPPPGPPSL----RRAPINQP-----RRCQS 147
Query: 231 ALLVRTLSLCKLSEPPPAPASRL 253
+ C PAPAS+L
Sbjct: 148 SGGSPRRCHCSSVPGAPAPASQL 170
>gi|39995080 hypothetical protein LOC79567 [Homo sapiens]
Length = 1219
Score = 35.0 bits (79), Expect = 0.084
Identities = 61/284 (21%), Positives = 90/284 (31%), Gaps = 56/284 (19%)
Query: 16 VPPSELEGHWFPPAGNRNTVSPSFLQDPRLSSELPESSGCGNLYKPTNTSSLFLPLGPWR 75
VPP+ GH + T S DP S+ L +++K T++ LP GP
Sbjct: 494 VPPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLD------SVHKSTDSGPSELP-GPTH 546
Query: 76 LLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPTPRSPRRESVPQHPWSLYSG 135
G S + T H P + T + P + S
Sbjct: 547 TTTGST--------YSAITTTHSAPSPLTHTTTGSTHKP-----------------IIST 581
Query: 136 LTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRS 195
LT + L++ T T + P H + H P H P +P H
Sbjct: 582 LTTTGPTLNIIGPVQTTTSPTHTMPS--PTHTTASPTHTSTSPTHTPT----SPTHKTSM 635
Query: 196 GLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSW 255
PT P G+ + TS P S +L+ P+ + L+
Sbjct: 636 SPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPTTSPILINV---------SPSTSLELAT 686
Query: 256 FLGPRSLLCPDLPGPDGNPDKLLGAKVLTAGPLSNVFRHPDKMS 299
P P LPG D P + P+SN + D M+
Sbjct: 687 LSSPSKHSDPTLPGTDSLP---------CSPPVSNSYTQADPMA 721
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 178 PIHP------PPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIP 223
P+HP PPPP R+PR G L A R G GL ++ P P
Sbjct: 37 PLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESSTASAPGEP 88
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 34.7 bits (78), Expect = 0.11
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 25/93 (26%)
Query: 178 PIHPPPPPPRAPRHAG------------------RSGLPTAHRPGRQGLVRGRRRTSKGR 219
P PPPPPP AP G S P +P R G +GRR ++ R
Sbjct: 69 PEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRGPVGTKPKRPG--QGRRAGARMR 126
Query: 220 PCIPGWRSCASALLVRTLSLCKLSEPPPAPASR 252
P AS ++ S PPP P SR
Sbjct: 127 SAAP-----ASPRARAARAISNQSSPPPPPPSR 154
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 34.7 bits (78), Expect = 0.11
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 25/93 (26%)
Query: 178 PIHPPPPPPRAPRHAG------------------RSGLPTAHRPGRQGLVRGRRRTSKGR 219
P PPPPPP AP G S P +P R G +GRR ++ R
Sbjct: 69 PEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRGPVGTKPKRPG--QGRRAGARMR 126
Query: 220 PCIPGWRSCASALLVRTLSLCKLSEPPPAPASR 252
P AS ++ S PPP P SR
Sbjct: 127 SAAP-----ASPRARAARAISNQSSPPPPPPSR 154
>gi|186910323 hypothetical protein LOC79969 isoform 2 [Homo sapiens]
Length = 333
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 15/79 (18%)
Query: 175 LFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLV 234
L + + PP P RAPR A P AH P R + RP +P L+
Sbjct: 243 LKVAVEPPWPLNRAPRRA----TPPAHPPPRSSSLGNSPERGPLRPFVP------EQELL 292
Query: 235 RTLSLCKLSEPPPAPASRL 253
R+L LC PP P +RL
Sbjct: 293 RSLRLC-----PPHPTARL 306
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 34.7 bits (78), Expect = 0.11
Identities = 54/213 (25%), Positives = 78/213 (36%), Gaps = 36/213 (16%)
Query: 52 SSGCGNLYKPTNTSSLFLP-LGPWRLLRGPNGTWR----KAFITSPLGTVHRVPGAASGT 106
S G G P N ++ ++P L P R P R + +S GT P +G
Sbjct: 542 SEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAG- 600
Query: 107 EVNAEAIPPTPRSPRRESVPQHPWSLYS-GLTVSSQELDLCFCTNI------TEKRLQTP 159
PP + P+ SL S G +VSS LC ++ + ++ TP
Sbjct: 601 -------PPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTP 653
Query: 160 -GAR--LPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTS 216
G R +P H + + P PPP PR+P P A +V G T+
Sbjct: 654 LGDRFVIPPHPKVPA------PFSPPPSKPRSPN-------PAAPALAAPAVVPGPVSTT 700
Query: 217 KGRPCIPGWRSCASALLVRTLSLCKLSEPPPAP 249
P P L + + K PPP+P
Sbjct: 701 DASPQSPPTPQTTLTPLQESPVISKDQSPPPSP 733
Score = 30.0 bits (66), Expect = 2.7
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 235 RTLSLCKLSEPPPAPASRLSWFLGPRSLLCPDLPGPDGNPDK 276
R++SL KL PPP P R + L R L PD GP G P K
Sbjct: 487 RSVSLRKLKRPPPPP--RRTHSLHQRGLAVPD--GPLGLPPK 524
Score = 29.6 bits (65), Expect = 3.5
Identities = 68/286 (23%), Positives = 97/286 (33%), Gaps = 78/286 (27%)
Query: 8 SMTSGLGNVPPSELEGHWFPPAGNRNTVSP-----SFLQDPRLSSELPESSGCGNLYKPT 62
S SG +PP L G PPA P + L+ P S +S C + P
Sbjct: 585 SSQSGTPTLPPKGLAG---PPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPA 641
Query: 63 NTS----SLFLPLGPWRLLRGPNGTWRKAFITSPLGTVHRVPGAASGTEVNAEAIPPTPR 118
+ + PLG R + P+ F SP + R P A+ + A A+ P P
Sbjct: 642 PSDRSGPQILTPLGD-RFVIPPHPKVPAPF--SPPPSKPRSPNPAAPA-LAAPAVVPGPV 697
Query: 119 SPRRESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLP 178
S S PQ P + + LT + + + K P + P +
Sbjct: 698 STTDAS-PQSPPTPQTTLTPLQE-------SPVISKDQSPPPSPPPSY------------ 737
Query: 179 IHPPPPPPRAPRHA--GRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRT 236
HPPPPP + P S TA P + P W
Sbjct: 738 -HPPPPPTKKPEVVVEAPSASETAEEPLQD----------------PNWP---------- 770
Query: 237 LSLCKLSEPPPAPASR---LSWFLGPR----SLLCPDLPGPDGNPD 275
PPPAP + ++ F P S+ P+ GP G+P+
Sbjct: 771 ------PPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPE 810
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 33.9 bits (76), Expect = 0.19
Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 152 TEKRLQTPGARLPHHRRCASEHNLFLPIHPPP-PPPR----APRHAGRSGLPTAHRPGRQ 206
T R +PGAR P S L P PPP P PR APRH G G P R RQ
Sbjct: 170 TGPRHASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEG--GRPGRGRTRRQ 227
Query: 207 GLVRG 211
+ G
Sbjct: 228 PHLAG 232
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 33.9 bits (76), Expect = 0.19
Identities = 46/177 (25%), Positives = 63/177 (35%), Gaps = 32/177 (18%)
Query: 100 PGAASGTEVNAEAIPPTPRSPRRESVPQH------------PWSLYSGLT-----VSSQE 142
P A+ + A PPTP PR P+H P L+ G Q
Sbjct: 462 PAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQP 521
Query: 143 LDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPP-----PPPRAPR-HAGRSG 196
+ T + + +P A P +FL P P PPR PR H R+G
Sbjct: 522 PPKVYVTRVRPGQRASPRAPAP-RAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTG 580
Query: 197 LPTAHRP-------GRQGLVRGRRRT-SKGRPCIPGWRSCASALLVRTLSLCKLSEP 245
P A +P QG G+ RT P + S + + LSL ++S P
Sbjct: 581 GPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGP 637
>gi|40804761 nanos homolog 1 [Homo sapiens]
Length = 292
Score = 33.9 bits (76), Expect = 0.19
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 100 PGAASGTEVNAEAIPPTPRSPRRESVPQ-HPWSLYSGLTVSSQELDLC-FCTNITEKR-- 155
P AA+ +EA P R+P + P+ H S + + EL +C FC N E
Sbjct: 167 PAAAAAATTTSEATPREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMAL 226
Query: 156 -----LQTPGARL--PHHRR-----CASE----HNL-FLPIHP-PPPPPRAPRHAGRSGL 197
L+ P R+ P RR C + H + + P+ PPPP R P + R G
Sbjct: 227 YTTHILKGPDGRVLCPVLRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGP 286
Query: 198 P 198
P
Sbjct: 287 P 287
>gi|144953905 hypothetical protein LOC55138 [Homo sapiens]
Length = 464
Score = 33.9 bits (76), Expect = 0.19
Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 90 TSPLGTVHRVPGAASGTEVNAEAIPPTPRSPRRESVPQ-------HPWSLYSGLTVS--- 139
+SP G VP AAS T +A+ P + R Q H L S L+
Sbjct: 231 SSPAGGCREVPQAASKTHGLLQAVSPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290
Query: 140 --SQELDLCFCTNITEKRLQTPGARLPHHRRCASEHNLFLPIHPPPPPPR-APRHAGRSG 196
S + C N +K P ++P E + PPP PR + ++G
Sbjct: 291 KRSAPAPIQACLNFPKKPRLGP-FQIPESAIQGGELGAPENLQPPPAATELGPRTSPQTG 349
Query: 197 LPTAHRPGRQGLVRGRRRTSKGRPCIPGWRSC 228
T + ++ G R+ RPC+P ++C
Sbjct: 350 TRTPAQ-----VLSGDRQPPHSRPCLPTAQAC 376
Score = 28.9 bits (63), Expect = 6.0
Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 19/136 (13%)
Query: 17 PPS--ELEGHWFPPAGNRNT--VSPSFLQDPRLSSELPESSGCGNLYKPTNTSSLFLPLG 72
PP+ EL P G R V Q P LP + C + P + PL
Sbjct: 334 PPAATELGPRTSPQTGTRTPAQVLSGDRQPPHSRPCLPTAQACTMSHHPAASHDGAQPL- 392
Query: 73 PWRLL--RGPNGTWRKAFITSPLGTVHRVPGA--ASGTEVNAEAIPPTPRSPRRESVPQH 128
R+L R NG W + +T+P PGA A V+ ++ P R P
Sbjct: 393 --RVLFRRLENGRWSSSLLTAPSFHSPEKPGAFLAQSPHVSEKSEGPCVRVP-------- 442
Query: 129 PWSLYSGLTVSSQELD 144
P LY L V S D
Sbjct: 443 PSVLYEDLQVPSSSED 458
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 33.9 bits (76), Expect = 0.19
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 165 HHRRCASEHNLFLPIHPPPPPPRAPRH 191
HH A H+ P PPPPPP P H
Sbjct: 149 HHHAAAHHHHHHHPPQPPPPPPPPPPH 175
Score = 29.3 bits (64), Expect = 4.6
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 165 HHRRCASEHNLF----LPIHPPPPPPRAPRHAGRSGLPTAHRP 203
HH A+ H+ P PPPPPP H PTA +P
Sbjct: 148 HHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQP 190
>gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens]
Length = 326
Score = 33.5 bits (75), Expect = 0.25
Identities = 38/142 (26%), Positives = 50/142 (35%), Gaps = 22/142 (15%)
Query: 162 RLPHHRRCASEHNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPC 221
R P+ RC HN + P PP + SGLP+ RRTS P
Sbjct: 155 RCPYGSRCHFIHNPSEDLAAPGHPPVLRQSISFSGLPSG------------RRTSPPPPG 202
Query: 222 IPGWRSCASALLVRTLSLCKLSEPPP---APASRLSWFLGPRSLLCPDLPGPDGNPDKLL 278
+ G +S S S PPP P S ++ P + L P P P
Sbjct: 203 LAGPSLSSS-------SFSPSSSPPPPGDLPLSPSAFSAAPGTPLARRDPTPVCCPSCRR 255
Query: 279 GAKVLTAGPLSNVFRHPDKMSV 300
+ GPL + R P S+
Sbjct: 256 ATPISVWGPLGGLVRTPSVQSL 277
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 33.5 bits (75), Expect = 0.25
Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 30/112 (26%)
Query: 166 HRRCASEHNLFL----------PIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRT 215
HR +EH L P PP PP P R PT+ PGR
Sbjct: 205 HRAATAEHQLGAGFSVRNGPGPPARLPPAPPGPPLRPARPHNPTSRGPGRL--------- 255
Query: 216 SKGRPCIPGWRSCASALLVRTLSLCK---LSEPPPAPASRLSWFLGPRSLLC 264
C P S L L LC+ + PPP RL P +LLC
Sbjct: 256 ---LTCEP-----PSRKLPPPLPLCRSRWVLAPPPTVRPRLRVLTPPFTLLC 299
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 33.5 bits (75), Expect = 0.25
Identities = 52/177 (29%), Positives = 68/177 (38%), Gaps = 44/177 (24%)
Query: 98 RVPGAASGTEVNAEAI----PPTPRSPRRESVPQHPWSLYSGLTVSSQELDLCFCTNITE 153
+ PG G A+ I P PR P E +P ++ SGLT
Sbjct: 129 QAPGRPLGACARAKGIRLVNPSPPRPP--EPIPASA-AVTSGLTARGPNTSA-------- 177
Query: 154 KRLQTPGARLPHHRRCASEHNLFLP-----IHPPPPP--PRAPRHAGRSGL----PTAHR 202
TPG P R ++E +P + PPPP PR P G SGL P H
Sbjct: 178 ----TPG---PQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHA 230
Query: 203 PGRQGLVRGRRRTSKGRPCIPGWRSCASALLVRTLSLCKLSEPPPAPASRLSWFLGP 259
GR R++ ++ RP +P S S + T LC S AP L +F P
Sbjct: 231 GGR------RKKFTRTRP-LPRTSSFLSE-VPSTRPLCATSSSHSAP---LPFFWSP 276
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,128,548
Number of Sequences: 37866
Number of extensions: 1049205
Number of successful extensions: 8835
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 224
Number of HSP's that attempted gapping in prelim test: 7858
Number of HSP's gapped (non-prelim): 1115
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.