Guide to the Human Genome
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Name: FAM108A5 Sequence: fasta or formatted (403aa) NCBI GI: 169215726
Description:

PREDICTED: family with sequence similarity 108, member A5

Not currently referenced in the text

Other entries for this name:
alt mRNA {403aa} PREDICTED: family with sequence similarity 108, member A5
alt mRNA {403aa} PREDICTED: hypothetical protein LOC729495
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         40           2
 C cysteine            3.5         14           2
 D aspartate           4.2         17           1
 E glutamate           5.0         20           1
 F phenylalanine       3.2         13           2
 G glycine            12.2         49           3
 H histidine           3.0         12           1
 I isoleucine          4.0         16           2
 K lysine              1.7          7           1
 L leucine             8.4         34           2
 M methionine          1.7          7           1
 N asparagine          2.2          9           1
 P proline             9.9         40           3
 Q glutamine           2.0          8           1
 R arginine            6.7         27           2
 S serine              6.7         27           2
 T threonine           3.5         14           1
 V valine              5.5         22           2
 W tryptophan          2.5         10           2
 Y tyrosine            4.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: family with sequence similarity 108, mem... 
FAM108A5              1.000   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              1.000   PREDICTED: hypothetical protein LOC729495 
LOC100289252          0.726   PREDICTED: hypothetical protein XP_002342156 
FAM108A4              0.706   PREDICTED: hypothetical protein 
FAM108A1              0.643   hypothetical protein LOC81926 isoform 2 
FAM108A1              0.615   hypothetical protein LOC81926 isoform 1 
FAM108C1              0.521   hypothetical protein LOC58489 
FAM108B1              0.505   family with sequence similarity 108, member B1 isofo...
FAM108B1              0.505   family with sequence similarity 108, member B1 isofo...
ABHD13                0.058   abhydrolase domain containing 13 
ABHD12B               0.050   abhydrolase domain containing 12B isoform c 
ABHD12B               0.050   abhydrolase domain containing 12B isoform b 
ABHD12                0.045   abhydrolase domain containing 12 isoform a 
ABHD12                0.045   abhydrolase domain containing 12 isoform b 
PPP1R10               0.021   protein phosphatase 1, regulatory subunit 10 
PRDM6                 0.018   PR domain containing 6 
LOC100293149          0.018   PREDICTED: similar to protein phosphatase 1, regula...
PPP1R3F               0.018   protein phosphatase 1, regulatory (inhibitor) subuni...
PRR13                 0.017   proline rich 13 isoform 1 
BAT5                  0.017   HLA-B associated transcript 5 
MAPK1IP1L             0.017   MAPK-interacting and spindle-stabilizing protein [Ho...
IER5                  0.016   immediate early response 5 
SYNGAP1               0.014   synaptic Ras GTPase activating protein 1 
WTIP                  0.014   Wilms tumor 1 interacting protein 
LTBP1                 0.014   latent transforming growth factor beta binding prote...
WAS                   0.013   Wiskott-Aldrich syndrome protein 
ATOH8                 0.013   atonal homolog 8 
TAF4                  0.013   TBP-associated factor 4 
IRS2                  0.013   insulin receptor substrate 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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