Guide to the Human Genome
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Name: ABHD12B Sequence: fasta or formatted (255aa) NCBI GI: 32451492
Description:

abhydrolase domain containing 12B isoform b

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [285aa] abhydrolase domain containing 12B isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         17           2
 C cysteine            2.7          7           2
 D aspartate           5.5         14           2
 E glutamate           5.5         14           2
 F phenylalanine       3.5          9           1
 G glycine             7.8         20           2
 H histidine           3.1          8           1
 I isoleucine          5.9         15           2
 K lysine              7.1         18           2
 L leucine            11.0         28           2
 M methionine          1.6          4           1
 N asparagine          3.9         10           1
 P proline             5.5         14           2
 Q glutamine           0.8          2           1
 R arginine            5.5         14           1
 S serine              5.5         14           2
 T threonine           5.5         14           2
 V valine              7.1         18           1
 W tryptophan          2.4          6           1
 Y tyrosine            3.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain containing 12B isoform b 
ABHD12B               0.976   abhydrolase domain containing 12B isoform c 
ABHD12                0.448   abhydrolase domain containing 12 isoform a 
ABHD12                0.436   abhydrolase domain containing 12 isoform b 
FAM108A4              0.089   PREDICTED: hypothetical protein 
ABHD13                0.087   abhydrolase domain containing 13 
FAM108A1              0.087   hypothetical protein LOC81926 isoform 2 
FAM108A1              0.087   hypothetical protein LOC81926 isoform 1 
FAM108A5              0.083   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              0.083   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              0.083   PREDICTED: hypothetical protein LOC729495 
FAM108B1              0.081   family with sequence similarity 108, member B1 isofo...
FAM108B1              0.081   family with sequence similarity 108, member B1 isofo...
LOC100289252          0.077   PREDICTED: hypothetical protein XP_002342156 
FAM108C1              0.073   hypothetical protein LOC58489 
BAT5                  0.026   HLA-B associated transcript 5 
C20orf135             0.022   hypothetical protein LOC140701 
EPHX3                 0.020   abhydrolase domain containing 9 
EPHX3                 0.020   abhydrolase domain containing 9 
PPME1                 0.020   protein phosphatase methylesterase 1 
ABHD14A               0.016   abhydrolase domain containing 14A 
EPHX2                 0.014   epoxide hydrolase 2, cytoplasmic 
ABHD11                0.014   abhydrolase domain containing 11 isoform 2 
ABHD11                0.012   abhydrolase domain containing 11 isoform 1 
ABHD11                0.012   abhydrolase domain containing 11 isoform 8 
EPHX4                 0.010   abhydrolase domain containing 7 
APEH                  0.010   N-acylaminoacyl-peptide hydrolase 
LYPLA2                0.008   lysophospholipase II 
NLGN1                 0.008   neuroligin 1 
ACACB                 0.006   acetyl-Coenzyme A carboxylase beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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