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Search of human proteins with 11141881
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
(237 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens] 476 e-134
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 196 1e-50
gi|4507473 TG-interacting factor isoform c [Homo sapiens] 196 1e-50
gi|28178855 TG-interacting factor isoform d [Homo sapiens] 196 1e-50
gi|28178853 TG-interacting factor isoform d [Homo sapiens] 196 1e-50
gi|28178851 TG-interacting factor isoform d [Homo sapiens] 196 1e-50
gi|28178857 TG-interacting factor isoform d [Homo sapiens] 196 1e-50
gi|28178849 TG-interacting factor isoform c [Homo sapiens] 196 1e-50
gi|28178845 TG-interacting factor isoform b [Homo sapiens] 196 1e-50
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ... 158 4e-39
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ... 114 1e-25
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 80 1e-15
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 79 4e-15
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 77 2e-14
gi|4505151 Meis homeobox 1 [Homo sapiens] 73 2e-13
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens] 73 2e-13
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens] 73 2e-13
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens] 73 2e-13
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens] 73 2e-13
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens] 73 2e-13
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens] 72 3e-13
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens] 72 3e-13
gi|178057337 mohawk homeobox [Homo sapiens] 57 1e-08
gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho... 57 1e-08
gi|42544241 iroquois homeobox protein 6 [Homo sapiens] 57 1e-08
gi|7705555 iroquois homeobox 4 [Homo sapiens] 56 3e-08
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 55 5e-08
gi|226371735 iroquois homeobox 3 [Homo sapiens] 55 5e-08
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens] 55 7e-08
gi|197100900 iroquois homeobox 2 [Homo sapiens] 53 2e-07
>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
Length = 237
Score = 476 bits (1224), Expect = e-134
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MSDSDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNL 60
MSDSDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNL
Sbjct: 1 MSDSDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNL 60
Query: 61 SVLQICNWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPA 120
SVLQICNWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPA
Sbjct: 61 SVLQICNWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPA 120
Query: 121 PTNVLSLSVCSMPLHSGQGEKPAAPFPRGELESPKPLVTPGSTLTLLTRAEAGSPTGGLF 180
PTNVLSLSVCSMPLHSGQGEKPAAPFPRGELESPKPLVTPGSTLTLLTRAEAGSPTGGLF
Sbjct: 121 PTNVLSLSVCSMPLHSGQGEKPAAPFPRGELESPKPLVTPGSTLTLLTRAEAGSPTGGLF 180
Query: 181 NTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQKQQDPSLPLLHTPIPLVSENPQ 237
NTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQKQQDPSLPLLHTPIPLVSENPQ
Sbjct: 181 NTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQKQQDPSLPLLHTPIPLVSENPQ 237
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 162 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 221
Query: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 222 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 281
Query: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 282 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 341
Query: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 342 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 396
>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 33 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92
Query: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 93 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 152
Query: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 153 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 212
Query: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 213 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 267
>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 13 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
Query: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 73 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 132
Query: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 133 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 192
Query: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 193 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 247
>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 13 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
Query: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 73 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 132
Query: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 133 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 192
Query: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 193 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 247
>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 13 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
Query: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 73 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 132
Query: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 133 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 192
Query: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 193 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 247
>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 13 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
Query: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 73 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 132
Query: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 133 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 192
Query: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 193 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 247
>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 33 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92
Query: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 93 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 152
Query: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 153 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 212
Query: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 213 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 267
>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
Length = 286
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 47 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 106
Query: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 107 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 166
Query: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 167 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 226
Query: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 227 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 281
>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
sapiens]
Length = 241
Score = 158 bits (399), Expect = 4e-39
Identities = 93/208 (44%), Positives = 125/208 (60%), Gaps = 21/208 (10%)
Query: 18 KRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRLL 77
K+KR+GNLP ESVKILRDW+Y HR+ AYPSE+EK LS +TNLS+LQI NWFINARRR+L
Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRIL 109
Query: 78 PDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPA-PTNVLSLSVCSMPLHS 136
PDML++ DP I + GK + + + SV A S P+ P NV SL
Sbjct: 110 PDMLQQRRNDP---IIGHKTGKDAHATHLQSTEASVPAKSGPSGPDNVQSL--------- 157
Query: 137 GQGEKPAAPFPRGEL---ESPKPLVTPGSTLTLLTRAEAGSPTGGLFNTPPPTPPEQDKE 193
P P P+G++ + P P P LT + + + + P ++
Sbjct: 158 -----PLWPLPKGQMSREKQPDPESAPSQKLTGIAQPKKKVKVSVTSPSSPELVSPEEHA 212
Query: 194 DFSSFQLLVEVALQRAAEMELQKQQDPS 221
DFSSF LLV+ A+QRAAE+EL+K+Q+P+
Sbjct: 213 DFSSFLLLVDAAVQRAAELELEKKQEPN 240
>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
sapiens]
Length = 185
Score = 114 bits (284), Expect = 1e-25
Identities = 59/113 (52%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 18 KRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRLL 77
K+KR+GNLP ESVKILRDW+Y HR+ AYPSE+EK LS +TNLS+L+I NWFINARRR+L
Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRIL 109
Query: 78 PDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPAPTNVLSLSVC 130
PDML++ DP I + GK + + + SV A S P + C
Sbjct: 110 PDMLQQRRNDP---IIGHKTGKDAHATHLQSTEASVPAKSGPVVQTMYKACPC 159
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 80.5 bits (197), Expect = 1e-15
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 19 RKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRLLP 78
+ +RG LPK + I+R WL+ H + YP+E EK ++ QTNL++LQ+ NWFINARRR+L
Sbjct: 289 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 348
Query: 79 DMLRKDGKDP 88
ML DP
Sbjct: 349 PMLDASNPDP 358
>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 2 [Homo sapiens]
Length = 358
Score = 78.6 bits (192), Expect = 4e-15
Identities = 39/96 (40%), Positives = 56/96 (58%)
Query: 2 SDSDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLS 61
S S GEDE L + K+RG PK + I+R WL+ H + YPSE++K L+ T L+
Sbjct: 229 SPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLT 288
Query: 62 VLQICNWFINARRRLLPDMLRKDGKDPNQFTISRRG 97
+LQ+ NWFINARRR++ M+ + + S G
Sbjct: 289 ILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEG 324
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 76.6 bits (187), Expect = 2e-14
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 4 SDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVL 63
S L +D+G + +RG LPK + ++R WL+ H + YP+E EK ++ QTNL++L
Sbjct: 250 SILHQDDG-----SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLL 304
Query: 64 QICNWFINARRRLLPDML 81
Q+ NWFINARRR+L ML
Sbjct: 305 QVNNWFINARRRILQPML 322
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 73.2 bits (178), Expect = 2e-13
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 7 GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66
G+D+ + K+RG PK + I+R WL+ H + YPSE++K L+ T L++LQ+
Sbjct: 261 GDDDDPDKDKKRHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 320
Query: 67 NWFINARRRLLPDMLRKDGKDPNQFT 92
NWFINARRR++ M+ + + +Q T
Sbjct: 321 NWFINARRRIVQPMIDQSNRAVSQGT 346
>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
Length = 306
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 7 GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66
G+D+ ++K+RG PK + I+R WL+ H + YPSE++K L+ T L++LQ+
Sbjct: 177 GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 236
Query: 67 NWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGS 109
NWFINARRR++ M+ + + +Q G S P GS
Sbjct: 237 NWFINARRRIVQPMIDQSNRAVSQ------GAAYSPEGQPMGS 273
>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
Length = 470
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 7 GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66
G+D+ ++K+RG PK + I+R WL+ H + YPSE++K L+ T L++LQ+
Sbjct: 265 GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 324
Query: 67 NWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGS 109
NWFINARRR++ M+ + + +Q G S P GS
Sbjct: 325 NWFINARRRIVQPMIDQSNRAVSQ------GAAYSPEGQPMGS 361
>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
Length = 477
Score = 73.2 bits (178), Expect = 2e-13
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 7 GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66
G+D+ ++K+RG PK + I+R WL+ H + YPSE++K L+ T L++LQ+
Sbjct: 265 GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 324
Query: 67 NWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPAPTNVLS 126
NWFINARRR++ M+ + S R G D ++ +G++ S P + VL
Sbjct: 325 NWFINARRRIVQPMIDQ----------SNRAGFLLDPSVSQGAAYS--PEGQPMGSFVLD 372
Query: 127 ----LSVCSMPLHSGQGEKPAAPFPRGELESPKPLVTPGSTLTLLTRAEAGSPTGGLFNT 182
+ + L S G+ + P G + +P TP T+ G P +
Sbjct: 373 GQQHMGIRPAGLQSMPGDYVSQGGPMG-MSMAQPSYTPPQMTPHPTQLRHGPPMHSYLPS 431
Query: 183 PPPTP 187
P P
Sbjct: 432 HPHHP 436
>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
Length = 394
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 7 GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66
G+D+ ++K+RG PK + I+R WL+ H + YPSE++K L+ T L++LQ+
Sbjct: 265 GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 324
Query: 67 NWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGS 109
NWFINARRR++ M+ + + +Q G S P GS
Sbjct: 325 NWFINARRRIVQPMIDQSNRAVSQ------GAAYSPEGQPMGS 361
>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
Length = 381
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 7 GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66
G+D+ ++K+RG PK + I+R WL+ H + YPSE++K L+ T L++LQ+
Sbjct: 252 GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 311
Query: 67 NWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGS 109
NWFINARRR++ M+ + + +Q G S P GS
Sbjct: 312 NWFINARRRIVQPMIDQSNRAVSQ------GAAYSPEGQPMGS 348
>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
Length = 388
Score = 72.4 bits (176), Expect = 3e-13
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 7 GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66
G+D+ ++K+RG PK + I+R WL+ H + YPSE++K L+ T L++LQ+
Sbjct: 252 GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 311
Query: 67 NWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPS 112
NWFINARRR++ M+ + S R G D ++ +G++ S
Sbjct: 312 NWFINARRRIVQPMIDQ----------SNRAGFLLDPSVSQGAAYS 347
>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
Length = 401
Score = 72.4 bits (176), Expect = 3e-13
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 7 GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66
G+D+ ++K+RG PK + I+R WL+ H + YPSE++K L+ T L++LQ+
Sbjct: 265 GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 324
Query: 67 NWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPS 112
NWFINARRR++ M+ + S R G D ++ +G++ S
Sbjct: 325 NWFINARRRIVQPMIDQ----------SNRAGFLLDPSVSQGAAYS 360
>gi|178057337 mohawk homeobox [Homo sapiens]
Length = 352
Score = 57.0 bits (136), Expect = 1e-08
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 17 GKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76
GK + + ++ + L+ WLY HR N YP++ EK+ L+ + ++++Q+ NWF NARRRL
Sbjct: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
>gi|57863281 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 1 [Homo sapiens]
Length = 421
Score = 57.0 bits (136), Expect = 1e-08
Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 46/142 (32%)
Query: 2 SDSDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHR-------------------- 41
S S GEDE L + K+RG PK + I+R WL+ H
Sbjct: 246 SPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPS 305
Query: 42 --------------------------YNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
+ YPSE++K L+ T L++LQ+ NWFINARRR
Sbjct: 306 PGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 365
Query: 76 LLPDMLRKDGKDPNQFTISRRG 97
++ M+ + + S G
Sbjct: 366 IVQPMIDQSNRTGQGAAFSPEG 387
>gi|42544241 iroquois homeobox protein 6 [Homo sapiens]
Length = 446
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 13 LSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINA 72
LS AG+RK N +E+ L+ WL HR N YP++ EK+ L+ T +++ Q+ WF NA
Sbjct: 144 LSGAGRRK---NATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 200
Query: 73 RRRL 76
RRRL
Sbjct: 201 RRRL 204
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 55.8 bits (133), Expect = 3e-08
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 21 RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76
RR N +E+ L+ WL HR N YP++ EK+ L+ T +++ Q+ WF NARRRL
Sbjct: 145 RRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 200
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 55.1 bits (131), Expect = 5e-08
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 17 GKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76
G R N +ES L+ WL HR N YP++ EK+ L+ T +++ Q+ WF NARRRL
Sbjct: 126 GDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185
Query: 77 LPDMLRKDGKDPNQFTISRRGGKASDVAL 105
K N+ T R D AL
Sbjct: 186 ---------KKENKVTWGARSKDQEDGAL 205
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 55.1 bits (131), Expect = 5e-08
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 17 GKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76
G R N +ES L+ WL HR N YP++ EK+ L+ T +++ Q+ WF NARRRL
Sbjct: 126 GDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185
>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 7e-08
Identities = 47/165 (28%), Positives = 65/165 (39%), Gaps = 34/165 (20%)
Query: 15 LAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARR 74
L R++R N K++ ++L ++ Y H N YPSE+ K L+ + L++ Q+ NWF N R
Sbjct: 207 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 266
Query: 75 RLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPAPTNVLSLSVCSMPL 134
R +M GK + A +V V P N S S P
Sbjct: 267 RYKKNM-----------------GKFQEEATIYTGKTAVDTTEVGVPGN--HASCLSTPS 307
Query: 135 HSGQGEKPAAPFPRGELESPKPLVTPGST-LTLLTRAEAGSPTGG 178
G P PL + G LTL T A P GG
Sbjct: 308 SGSSG--------------PFPLPSAGDAFLTLRTLASLQPPPGG 338
>gi|197100900 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 53.1 bits (126), Expect = 2e-07
Identities = 43/149 (28%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 22 RGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRLLPDML 81
R N +++ L+ WL HR N YP++ EK+ L+ T +++ Q+ WF NARRRL
Sbjct: 118 RKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL----- 172
Query: 82 RKDGKDPNQFTISRRGGK------ASDVALPRGSSPSVL--AVSVPAPTNVLSLSVCSMP 133
K N+ T + R D + SP A +SL V S+
Sbjct: 173 ----KKENKMTWAPRNKSEDEDEDEGDATRSKDESPDKAQEGTETSAEDEGISLHVDSLT 228
Query: 134 LHSGQGEKPAAPFPRGELESPKPLVTPGS 162
HS E P + PL GS
Sbjct: 229 DHSCSAESDGEKLP---CRAGDPLCESGS 254
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,462,676
Number of Sequences: 37866
Number of extensions: 674714
Number of successful extensions: 2703
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 2485
Number of HSP's gapped (non-prelim): 381
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.