Guide to the Human Genome
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Name: LOC100131109 Sequence: fasta or formatted (136aa) NCBI GI: 169211629
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {136aa} PREDICTED: hypothetical protein
alt mRNA {136aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         16           2
 C cysteine            5.1          7           1
 D aspartate           0.7          1           1
 E glutamate           3.7          5           2
 F phenylalanine       5.1          7           2
 G glycine             8.8         12           1
 H histidine           1.5          2           1
 I isoleucine          1.5          2           1
 K lysine              1.5          2           1
 L leucine             5.1          7           1
 M methionine          1.5          2           1
 N asparagine          1.5          2           1
 P proline            16.2         22           2
 Q glutamine           3.7          5           1
 R arginine           11.8         16           2
 S serine             11.0         15           2
 T threonine           2.9          4           1
 V valine              5.1          7           1
 W tryptophan          1.5          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100131109          1.000   PREDICTED: hypothetical protein 
LOC100131109          0.989   PREDICTED: hypothetical protein 
LOC100131225          0.071   PREDICTED: hypothetical protein 
LOC100131225          0.071   PREDICTED: hypothetical protein 
LOC100131225          0.071   PREDICTED: hypothetical protein 
LOC100131225          0.071   PREDICTED: hypothetical protein 
LOC645321             0.064   PREDICTED: hypothetical protein 
LOC645321             0.064   PREDICTED: hypothetical protein 
SAMD1                 0.053   sterile alpha motif domain containing 1 
LOC730036             0.053   PREDICTED: hypothetical protein 
DLGAP3                0.053   discs, large (Drosophila) homolog-associated protei...
SH3BP1                0.053   SH3-domain binding protein 1 
MAPK1IP1L             0.053   MAPK-interacting and spindle-stabilizing protein [Ho...
FOXE3                 0.049   forkhead box E3 
TAF4                  0.045   TBP-associated factor 4 
TMPRSS13              0.045   transmembrane protease, serine 13 
NACAD                 0.045   NAC alpha domain containing 
NACAD                 0.045   PREDICTED: NAC alpha domain containing 
NACAD                 0.045   PREDICTED: NAC alpha domain containing 
NACAD                 0.045   PREDICTED: NAC alpha domain containing 
NACAD                 0.045   PREDICTED: NAC alpha domain containing 
COL9A1                0.045   alpha 1 type IX collagen isoform 1 precursor 
SF3B4                 0.045   splicing factor 3b, subunit 4 
COL9A1                0.045   alpha 1 type IX collagen isoform 2 precursor 
HCN2                  0.045   hyperpolarization activated cyclic nucleotide-gated...
WAS                   0.045   Wiskott-Aldrich syndrome protein 
WASL                  0.045   Wiskott-Aldrich syndrome gene-like protein 
LOC100132234          0.045   PREDICTED: hypothetical protein LOC100132234 
LOC100132234          0.045   PREDICTED: hypothetical protein LOC100132234 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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