Search of human proteins with 169210878

Search of human proteins with 169210878

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169210878 PREDICTED: germ cell-specific gene 1-like protein
2-like [Homo sapiens]
         (293 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169211272 PREDICTED: germ cell-specific gene 1-like protein 2...   608   e-174
gi|169211660 PREDICTED: germ cell-specific gene 1-like protein 2...   608   e-174
gi|169210878 PREDICTED: germ cell-specific gene 1-like protein 2...   608   e-174
gi|157951718 GSG1-like isoform 1 [Homo sapiens]                       243   2e-64
gi|123317861 germ cell associated 1 isoform 2 [Homo sapiens]          187   9e-48
gi|123317881 germ cell associated 1 isoform 4 [Homo sapiens]          176   3e-44
gi|21389571 GSG1-like isoform 2 [Homo sapiens]                        132   5e-31
gi|123317847 germ cell associated 1 isoform 1 [Homo sapiens]           82   6e-16
gi|123317872 germ cell associated 1 isoform 3 [Homo sapiens]           70   2e-12
gi|4505907 peripheral myelin protein 22 [Homo sapiens]                 44   1e-04
gi|24430165 peripheral myelin protein 22 [Homo sapiens]                44   1e-04
gi|24430163 peripheral myelin protein 22 [Homo sapiens]                44   1e-04
gi|5729756 voltage-dependent calcium channel gamma-3 subunit [Ho...    44   2e-04
gi|5174405 voltage-dependent calcium channel gamma-2 subunit [Ho...    39   0.005
gi|10863887 claudin 1 [Homo sapiens]                                   38   0.009
gi|13899273 transmembrane protein 47 [Homo sapiens]                    35   0.060
gi|21361975 voltage-dependent calcium channel gamma-7 subunit [H...    35   0.10 
gi|22027551 voltage-dependent calcium channel gamma-5 subunit is...    34   0.13 
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H...    32   0.66 
gi|183979973 claudin 19 isoform a [Homo sapiens]                       31   1.1  
gi|183979975 claudin 19 isoform b [Homo sapiens]                       31   1.1  
gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Ho...    30   1.9  
gi|21361581 solute carrier family 6 (neurotransmitter transporte...    30   3.3  
gi|22748765 claudin domain containing 2 [Homo sapiens]                 29   4.3  
gi|4502539 voltage-dependent calcium channel gamma-1 subunit [Ho...    29   4.3  
gi|7656950 voltage-dependent calcium channel gamma-5 subunit iso...    29   4.3  
gi|33457316 pleckstrin homology domain containing, family O memb...    28   7.3  
gi|10938016 claudin 11 [Homo sapiens]                                  28   9.6  
gi|11225266 transient receptor potential cation channel, subfami...    28   9.6  

>gi|169211272 PREDICTED: germ cell-specific gene 1-like protein
           2-like [Homo sapiens]
          Length = 293

 Score =  608 bits (1569), Expect = e-174
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 1   MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS 60
           MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS
Sbjct: 1   MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS 60

Query: 61  SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG 120
           SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG
Sbjct: 61  SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG 120

Query: 121 VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM 180
           VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM
Sbjct: 121 VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM 180

Query: 181 YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ 240
           YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ
Sbjct: 181 YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ 240

Query: 241 AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC 293
           AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC
Sbjct: 241 AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC 293


>gi|169211660 PREDICTED: germ cell-specific gene 1-like protein
           2-like [Homo sapiens]
          Length = 293

 Score =  608 bits (1569), Expect = e-174
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 1   MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS 60
           MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS
Sbjct: 1   MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS 60

Query: 61  SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG 120
           SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG
Sbjct: 61  SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG 120

Query: 121 VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM 180
           VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM
Sbjct: 121 VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM 180

Query: 181 YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ 240
           YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ
Sbjct: 181 YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ 240

Query: 241 AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC 293
           AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC
Sbjct: 241 AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC 293


>gi|169210878 PREDICTED: germ cell-specific gene 1-like protein
           2-like [Homo sapiens]
          Length = 293

 Score =  608 bits (1569), Expect = e-174
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 1   MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS 60
           MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS
Sbjct: 1   MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS 60

Query: 61  SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG 120
           SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG
Sbjct: 61  SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG 120

Query: 121 VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM 180
           VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM
Sbjct: 121 VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM 180

Query: 181 YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ 240
           YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ
Sbjct: 181 YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ 240

Query: 241 AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC 293
           AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC
Sbjct: 241 AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC 293


>gi|157951718 GSG1-like isoform 1 [Homo sapiens]
          Length = 331

 Score =  243 bits (619), Expect = 2e-64
 Identities = 121/271 (44%), Positives = 174/271 (64%), Gaps = 15/271 (5%)

Query: 1   MDRAKQQQALLLLPV-CLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDN 59
           M  +++ +ALL + +  LAL F+ TA +++HWC+GT+RV KP C  Q G  +C +   + 
Sbjct: 1   MKTSRRGRALLAVALNLLALLFATTAFLTTHWCQGTQRVPKPGC-GQGGRANCPNSGANA 59

Query: 60  SSNGRMDNNSQAV-------------LYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEK 106
           ++NG     + A              LY WE GDD+F+ R FH G+W SCEE L+G  EK
Sbjct: 60  TANGTAAPAAAAAAATASGNGPPGGALYSWETGDDRFLFRNFHTGIWYSCEEELSGLGEK 119

Query: 107 CRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIF 166
           CRSF  + PA E+GVLWLS+  EVL I+L++    L+   +   S     L+++A  A+F
Sbjct: 120 CRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELFHSSNVIDGLKLNAFAAVF 179

Query: 167 MVLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMS 226
            VL+GLLGMVAHMMYT +FQ+TV+LGPEDW+P +WDYGWS+CLAWGSF  C+A SV+ ++
Sbjct: 180 TVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLN 239

Query: 227 RFTAARLEFTEKQQAQNGSRHSQHSFLEPEA 257
            +T   +EF  K++        + +F++PEA
Sbjct: 240 SYTKTVIEFRHKRKVFEQGYREEPTFIDPEA 270


>gi|123317861 germ cell associated 1 isoform 2 [Homo sapiens]
          Length = 326

 Score =  187 bits (475), Expect = 9e-48
 Identities = 96/231 (41%), Positives = 144/231 (62%), Gaps = 4/231 (1%)

Query: 6   QQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNSSNGRM 65
           Q+  L  +   L+L+FS T+++S++W  GT++V KPLC+    G     F    S +G  
Sbjct: 13  QRTLLSAILSMLSLSFSTTSLLSNYWFVGTQKVPKPLCEK---GLAAKCFDMPVSLDGDT 69

Query: 66  DNNSQAVL-YIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQGVLWL 124
           + ++Q V+ Y WE GDD+F  R F  G+W SCEE++    E+CRSF  + P  ++ +LWL
Sbjct: 70  NTSTQEVVQYNWETGDDRFSFRSFRSGMWLSCEETVEEPGERCRSFIELTPPAKREILWL 129

Query: 125 SIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTI 184
           S+G ++  I L   S +LL + +         L++ A  A+  VL+GLLGMVAHMMY+ +
Sbjct: 130 SLGTQITYIGLQFISFLLLLTDLLLTGNPACGLKLSAFAAVSSVLSGLLGMVAHMMYSQV 189

Query: 185 FQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEF 235
           FQ TVNLGPEDW+P  W+YGW++ +AW SF  C+A +V+  + +T   LEF
Sbjct: 190 FQATVNLGPEDWRPHVWNYGWAFYMAWLSFTCCMASAVTTFNTYTRMVLEF 240


>gi|123317881 germ cell associated 1 isoform 4 [Homo sapiens]
          Length = 362

 Score =  176 bits (445), Expect = 3e-44
 Identities = 96/254 (37%), Positives = 145/254 (57%), Gaps = 27/254 (10%)

Query: 6   QQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNSSNGRM 65
           Q+  L  +   L+L+FS T+++S++W  GT++V KPLC+    G     F    S +G  
Sbjct: 26  QRTLLSAILSMLSLSFSTTSLLSNYWFVGTQKVPKPLCEK---GLAAKCFDMPVSLDGDT 82

Query: 66  DNNSQAVL-YIWELGDDKFIQRGFHVGLWQSCEESLN----------------------- 101
           + ++Q V+ Y WE GDD+F  R F  G+W SCEE++                        
Sbjct: 83  NTSTQEVVQYNWETGDDRFSFRSFRSGMWLSCEETVEEPALLHPQSWKQFRALRSSGTAA 142

Query: 102 GEDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDA 161
            + E+CRSF  + P  ++ +LWLS+G ++  I L   S +LL + +         L++ A
Sbjct: 143 AKGERCRSFIELTPPAKREILWLSLGTQITYIGLQFISFLLLLTDLLLTGNPACGLKLSA 202

Query: 162 LVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVS 221
             A+  VL+GLLGMVAHMMY+ +FQ TVNLGPEDW+P  W+YGW++ +AW SF  C+A +
Sbjct: 203 FAAVSSVLSGLLGMVAHMMYSQVFQATVNLGPEDWRPHVWNYGWAFYMAWLSFTCCMASA 262

Query: 222 VSAMSRFTAARLEF 235
           V+  + +T   LEF
Sbjct: 263 VTTFNTYTRMVLEF 276


>gi|21389571 GSG1-like isoform 2 [Homo sapiens]
          Length = 176

 Score =  132 bits (331), Expect = 5e-31
 Identities = 54/101 (53%), Positives = 77/101 (76%)

Query: 157 LRVDALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFAL 216
           L+++A  A+F VL+GLLGMVAHMMYT +FQ+TV+LGPEDW+P +WDYGWS+CLAWGSF  
Sbjct: 15  LKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWGSFTC 74

Query: 217 CLAVSVSAMSRFTAARLEFTEKQQAQNGSRHSQHSFLEPEA 257
           C+A SV+ ++ +T   +EF  K++        + +F++PEA
Sbjct: 75  CMAASVTTLNSYTKTVIEFRHKRKVFEQGYREEPTFIDPEA 115


>gi|123317847 germ cell associated 1 isoform 1 [Homo sapiens]
          Length = 285

 Score = 82.0 bits (201), Expect = 6e-16
 Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 4/116 (3%)

Query: 6   QQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNSSNGRM 65
           Q+  L  +   L+L+FS T+++S++W  GT++V KPLC+    G     F    S +G  
Sbjct: 13  QRTLLSAILSMLSLSFSTTSLLSNYWFVGTQKVPKPLCEK---GLAAKCFDMPVSLDGDT 69

Query: 66  DNNSQAVL-YIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG 120
           + ++Q V+ Y WE GDD+F  R F  G+W SCEE++    E+CRSF  + P  ++G
Sbjct: 70  NTSTQEVVQYNWETGDDRFSFRSFRSGMWLSCEETVEEPGERCRSFIELTPPAKRG 125


>gi|123317872 germ cell associated 1 isoform 3 [Homo sapiens]
          Length = 321

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 27/139 (19%)

Query: 6   QQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNSSNGRM 65
           Q+  L  +   L+L+FS T+++S++W  GT++V KPLC+    G     F    S +G  
Sbjct: 26  QRTLLSAILSMLSLSFSTTSLLSNYWFVGTQKVPKPLCEK---GLAAKCFDMPVSLDGDT 82

Query: 66  DNNSQAVL-YIWELGDDKFIQRGFHVGLWQSCEESLN----------------------- 101
           + ++Q V+ Y WE GDD+F  R F  G+W SCEE++                        
Sbjct: 83  NTSTQEVVQYNWETGDDRFSFRSFRSGMWLSCEETVEEPALLHPQSWKQFRALRSSGTAA 142

Query: 102 GEDEKCRSFRSVVPAEEQG 120
            + E+CRSF  + P  ++G
Sbjct: 143 AKGERCRSFIELTPPAKRG 161


>gi|4505907 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 72  VLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQGVLWLSI--GGE 129
           +L++  +     +  G    LWQ+C  S +G    C S     P E     WL       
Sbjct: 18  LLFVSTIVSQWIVGNGHATDLWQNCSTSSSGNVHHCFSSS---PNE-----WLQSVQATM 69

Query: 130 VLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITV 189
           +L I+  + S  L   ++   + G  +     +  IF +LAGL  M A  +YT       
Sbjct: 70  ILSIIFSILSLFLFFCQLFTLTKGGRFY----ITGIFQILAGLCVMSAAAIYTVRH---- 121

Query: 190 NLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSV 222
              PE      + YG++Y LAW +F L L   V
Sbjct: 122 ---PEWHLNSDYSYGFAYILAWVAFPLALLSGV 151


>gi|24430165 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 72  VLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQGVLWLSI--GGE 129
           +L++  +     +  G    LWQ+C  S +G    C S     P E     WL       
Sbjct: 18  LLFVSTIVSQWIVGNGHATDLWQNCSTSSSGNVHHCFSSS---PNE-----WLQSVQATM 69

Query: 130 VLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITV 189
           +L I+  + S  L   ++   + G  +     +  IF +LAGL  M A  +YT       
Sbjct: 70  ILSIIFSILSLFLFFCQLFTLTKGGRFY----ITGIFQILAGLCVMSAAAIYTVRH---- 121

Query: 190 NLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSV 222
              PE      + YG++Y LAW +F L L   V
Sbjct: 122 ---PEWHLNSDYSYGFAYILAWVAFPLALLSGV 151


>gi|24430163 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 72  VLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQGVLWLSI--GGE 129
           +L++  +     +  G    LWQ+C  S +G    C S     P E     WL       
Sbjct: 18  LLFVSTIVSQWIVGNGHATDLWQNCSTSSSGNVHHCFSSS---PNE-----WLQSVQATM 69

Query: 130 VLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITV 189
           +L I+  + S  L   ++   + G  +     +  IF +LAGL  M A  +YT       
Sbjct: 70  ILSIIFSILSLFLFFCQLFTLTKGGRFY----ITGIFQILAGLCVMSAAAIYTVRH---- 121

Query: 190 NLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSV 222
              PE      + YG++Y LAW +F L L   V
Sbjct: 122 ---PEWHLNSDYSYGFAYILAWVAFPLALLSGV 151


>gi|5729756 voltage-dependent calcium channel gamma-3 subunit [Homo
           sapiens]
          Length = 315

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 18/167 (10%)

Query: 89  HVGLWQSC--EESLNGEDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLGSR 146
           H GLW++C  E +  G  +K   F      E+    +L        +  IL+  +L    
Sbjct: 60  HSGLWRTCCLEGAFRGVCKKIDHFPEDADYEQDTAEYLLRAVRASSVFPILSVTLLFFGG 119

Query: 147 VSCRSPGFHWLRVDALVA--IFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWKP--QTWD 202
           +   +  FH  R + +++  IF V AGL  ++  ++Y     I+ N G    +   +++ 
Sbjct: 120 LCVAASEFHRSRHNVILSAGIFFVSAGLSNIIGIIVY-----ISANAGDPGQRDSKKSYS 174

Query: 203 YGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQAQNGSRHSQ 249
           YGWS+     SF +   V V A+         + EK Q      HS+
Sbjct: 175 YGWSFYFGAFSFIIAEIVGVVAVH-------IYIEKHQQLRAKSHSE 214


>gi|5174405 voltage-dependent calcium channel gamma-2 subunit [Homo
           sapiens]
          Length = 323

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 12/147 (8%)

Query: 89  HVGLWQSC--EESLNGEDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLGSR 146
           H GLW++C  E +  G  ++   F      E     +         I  IL+  +L    
Sbjct: 60  HSGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGG 119

Query: 147 VSCRSPGFHWLRVDALVA--IFMVLAGLLGMVAHMMYTTIFQITVNLGP---EDWKPQTW 201
           +   +  F+  R + +++  IF V AGL  ++  ++Y     I+ N G     D K  ++
Sbjct: 120 LCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVY-----ISANAGDPSKSDSKKNSY 174

Query: 202 DYGWSYCLAWGSFALCLAVSVSAMSRF 228
            YGWS+     SF +   V V A+  F
Sbjct: 175 SYGWSFYFGALSFIIAEMVGVLAVHMF 201


>gi|10863887 claudin 1 [Homo sapiens]
          Length = 211

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 14/147 (9%)

Query: 79  GDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEE--QGVLWLSIGGEVLDIVLI 136
           GD+    +  + GLW SC     G+ + C+ F S++      Q    L + G +L ++ I
Sbjct: 37  GDNIVTAQAMYEGLWMSCVSQSTGQIQ-CKVFDSLLNLSSTLQATRALMVVGILLGVIAI 95

Query: 137 LTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPEDW 196
             + + +             +R+  +     +LAGL  +VA   Y         +  E +
Sbjct: 96  FVATVGMKCMKCLEDDEVQKMRMAVIGGAIFLLAGLAILVATAWYGN------RIVQEFY 149

Query: 197 KPQT-----WDYGWSYCLAWGSFALCL 218
            P T     +++G +    W + +LCL
Sbjct: 150 DPMTPVNARYEFGQALFTGWAAASLCL 176


>gi|13899273 transmembrane protein 47 [Homo sapiens]
          Length = 181

 Score = 35.4 bits (80), Expect = 0.060
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 20/128 (15%)

Query: 88  FHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTS--AILLGS 145
           +++ LW+SC +  + +   C S  S     +   L L +GG  + ++  L    +I +GS
Sbjct: 50  YYLSLWESCRKPASLDIWHCESTLS--SDWQIATLALLLGGAAIILIAFLVGLISICVGS 107

Query: 146 RVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGW 205
           R     P          VA+ +  A +L + + ++Y   F  TV+L          ++ W
Sbjct: 108 RRRFYRP----------VAVMLFAAVVLQVCSLVLYPIKFIETVSLKIYH------EFNW 151

Query: 206 SYCLAWGS 213
            Y LAWG+
Sbjct: 152 GYGLAWGA 159


>gi|21361975 voltage-dependent calcium channel gamma-7 subunit [Homo
           sapiens]
          Length = 275

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 12/112 (10%)

Query: 165 IFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQT-WDYGWSYCLAWGSFALCLAVSVS 223
           IF +L+GL  +V  ++Y +     V   P   +    + YGWS+  A  SF L     V 
Sbjct: 136 IFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYRYGWSFAFAASSFLLKEGAGVM 195

Query: 224 AMSRFTA--ARLEFTEKQQAQNGSRHSQHS-----FLEPEASESIWKTGAAP 268
           ++  FT   A  E      A    R S  S     FL+PEA    W+ G +P
Sbjct: 196 SVYLFTKRYAEEEMYRPHPAFYRPRLSDCSDYSGQFLQPEA----WRRGRSP 243


>gi|22027551 voltage-dependent calcium channel gamma-5 subunit
           isoform a [Homo sapiens]
          Length = 275

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 27/203 (13%)

Query: 84  IQRGFHVGLWQSCEESLNGEDE-KCRSFRSVVP-----AEEQGVLWLSIGGEVLDIVLIL 137
           I+   H GLW+ C   L GE+  +C +   V+P       E  V  L +        L+ 
Sbjct: 50  IKMSLHSGLWRVC--FLAGEERGRCFTIEYVMPMNTQLTSESTVNVLKMIRSATPFPLVS 107

Query: 138 TSAILLG---SRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMY-TTIFQITVNLGP 193
              + +G   + +    P  H   +  +  IF +L+GL  +V  ++Y ++I    +N   
Sbjct: 108 LFFMFIGFILNNIGHIRP--HRTILAFVSGIFFILSGLSLVVGLVLYISSINDEMLNRTK 165

Query: 194 EDWKPQTWDYGWSYCLAWGSFALCLAVSVSA----MSRFTAARLEFTE----KQQAQNGS 245
           +      + YGWS+  A  SF L  +  V +    M R+TA  +        + +  N S
Sbjct: 166 DAETYFNYKYGWSFAFAAISFLLTESAGVMSVYLFMKRYTAEDMYRPHPGFYRPRLSNCS 225

Query: 246 RHSQHSFLEPEASESIWKTGAAP 268
            +S   FL P+A    W  G +P
Sbjct: 226 DYS-GQFLHPDA----WVRGRSP 243


>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
           sapiens]
          Length = 425

 Score = 32.0 bits (71), Expect = 0.66
 Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 14/147 (9%)

Query: 89  HVGLWQSC--EESLNGEDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLGSR 146
           H GLW+ C  E    G   K   F      +     +L        I  IL++ +LL   
Sbjct: 84  HSGLWRICCLEGLKRGVCVKINHFPEDTDYDHDSAEYLLRVVRASSIFPILSAILLLLGG 143

Query: 147 VSCRSPGFHWLRVDALVA--IFMVLAGLLGMVAHMMYTTIFQITVNLGP-----EDWKPQ 199
           V   +   +  + + ++   I  V AGL  ++  ++Y     I+ N G      ++ K  
Sbjct: 144 VCVAASRVYKSKRNIILGAGILFVAAGLSNIIGVIVY-----ISANAGEPGPKRDEEKKN 198

Query: 200 TWDYGWSYCLAWGSFALCLAVSVSAMS 226
            + YGWS+     SF L   + V A++
Sbjct: 199 HYSYGWSFYFGGLSFILAEVIGVLAVN 225


>gi|183979973 claudin 19 isoform a [Homo sapiens]
          Length = 224

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 79  GDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEE--QGVLWLSIGGEVLDIVLI 136
           GD      G + GLW SC     G+  +C+ + S++  +   Q    L +   +L  V +
Sbjct: 37  GDAIITAVGLYEGLWMSCASQSTGQ-VQCKLYDSLLALDGHIQSARALMVVAVLLGFVAM 95

Query: 137 LTSAI-LLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPED 195
           + S + +  +RV   +P     RV        +LAGL  + A   Y T+      +  E 
Sbjct: 96  VLSVVGMKCTRVGDSNP-IAKGRVAIAGGALFILAGLCTLTAVSWYATL------VTQEF 148

Query: 196 WKPQT-----WDYGWSYCLAWGSFALCL 218
           + P T     +++G +  + W S  L +
Sbjct: 149 FNPSTPVNARYEFGPALFVGWASAGLAV 176


>gi|183979975 claudin 19 isoform b [Homo sapiens]
          Length = 211

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 79  GDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEE--QGVLWLSIGGEVLDIVLI 136
           GD      G + GLW SC     G+  +C+ + S++  +   Q    L +   +L  V +
Sbjct: 37  GDAIITAVGLYEGLWMSCASQSTGQ-VQCKLYDSLLALDGHIQSARALMVVAVLLGFVAM 95

Query: 137 LTSAI-LLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPED 195
           + S + +  +RV   +P     RV        +LAGL  + A   Y T+      +  E 
Sbjct: 96  VLSVVGMKCTRVGDSNP-IAKGRVAIAGGALFILAGLCTLTAVSWYATL------VTQEF 148

Query: 196 WKPQT-----WDYGWSYCLAWGSFALCL 218
           + P T     +++G +  + W S  L +
Sbjct: 149 FNPSTPVNARYEFGPALFVGWASAGLAV 176


>gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Homo
           sapiens]
          Length = 327

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 26/199 (13%)

Query: 89  HVGLWQSC--EESLNGEDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLGSR 146
           H GLW+ C  E    G   +   F      +     +L        +  IL++ +LL   
Sbjct: 63  HSGLWRVCCIEGIYKGHCFRINHFPEDNDYDHDSSEYLLRIVRASSVFPILSTILLLLGG 122

Query: 147 VSCRSPGFHWLRVDALV---AIFMVLAGLLGMVAHMMYTTIFQITVNLGP-----EDWKP 198
           + C   G  + R + +V    I  V AGL  ++  ++Y     I+ N G      ++ K 
Sbjct: 123 L-CIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIVY-----ISSNTGDPSDKRDEDKK 176

Query: 199 QTWDYGWSYCLAWGSFALCLAVSVSAMS---------RFTAARLEFTEKQQAQNGSRHSQ 249
             ++YGWS+     SF +   V V A++         RF   R EF +   +   +R   
Sbjct: 177 NHYNYGWSFYFGALSFIVAETVGVLAVNIYIEKNKELRFKTKR-EFLKASSSSPYARMPS 235

Query: 250 HSFLEPEASESIWKTGAAP 268
           + +    +  S   T A+P
Sbjct: 236 YRYRRRRSRSSSRSTEASP 254


>gi|21361581 solute carrier family 6 (neurotransmitter transporter,
           GABA), member 13 [Homo sapiens]
          Length = 602

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 43  CQDQPGGQHCIHFKRDNSS-NGRMDNNSQAVLYIWE 77
           C  +   +HC+ F++ N S NG  +N +  V+  WE
Sbjct: 153 CYHEWNTEHCMEFQKTNGSLNGTSENATSPVIEFWE 188


>gi|22748765 claudin domain containing 2 [Homo sapiens]
          Length = 167

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 26/127 (20%)

Query: 85  QRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLG 144
           Q+  H GLWQ C   +      C++  +V  A     + L++G  V+ +V        +G
Sbjct: 34  QQEGHSGLWQECNHGI-CSSIPCQTTLAVTVA----CMVLAVGVGVVGMV--------MG 80

Query: 145 SRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYG 204
            R+ C       LR     A F+ L GLL + A + YT             WK   + + 
Sbjct: 81  LRIRCDEG--ESLRGQTTSA-FLFLGGLLLLTALIGYTV---------KNAWKNNVF-FS 127

Query: 205 WSYCLAW 211
           WSY   W
Sbjct: 128 WSYFSGW 134


>gi|4502539 voltage-dependent calcium channel gamma-1 subunit [Homo
           sapiens]
          Length = 222

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 20/145 (13%)

Query: 89  HVGLWQSCEESLNGEDEK------------CRSFRSVVPAEEQGVLWLSIGGE----VLD 132
           H GLW+ C + +  +D K            C  FR   P E   +   +   E       
Sbjct: 50  HFGLWRICTKRIPMDDSKTCGPITLPGEKNCSYFRHFNPGESSEIFEFTTQKEYSISAAA 109

Query: 133 IVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVA-HMMYTTIFQITVNL 191
           I +     I+LGS     S G     +    ++F   AGL  +V+  +M  ++ ++   +
Sbjct: 110 IAIFSLGFIILGSLCVLLSLGKKRDYLLRPASMFYAFAGLCILVSVEVMRQSVKRM---I 166

Query: 192 GPEDWKPQTWDYGWSYCLAWGSFAL 216
             ED     + Y WS+  A  +F L
Sbjct: 167 DSEDTVWIEYYYSWSFACACAAFIL 191


>gi|7656950 voltage-dependent calcium channel gamma-5 subunit
           isoform b [Homo sapiens]
          Length = 296

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)

Query: 84  IQRGFHVGLWQSCEESLNGEDE-KCRSFRSVVP-----AEEQGVLWLSIGGEVLDIVLIL 137
           I+   H GLW+ C   L GE+  +C +   V+P       E  V  L +        L+ 
Sbjct: 50  IKMSLHSGLWRVC--FLAGEERGRCFTIEYVMPMNTQLTSESTVNVLKMIRSATPFPLVS 107

Query: 138 TSAILLG---SRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMY-TTIFQITVNLGP 193
              + +G   + +    P  H   +  +  IF +L+GL  +V  ++Y ++I    +N   
Sbjct: 108 LFFMFIGFILNNIGHIRP--HRTILAFVSGIFFILSGLSLVVGLVLYISSINDEMLNRTK 165

Query: 194 EDWKPQTWDYGWSYCLAWGSFAL 216
           +      + YGWS+  A  SF L
Sbjct: 166 DAETYFNYKYGWSFAFAAISFLL 188


>gi|33457316 pleckstrin homology domain containing, family O member
           2 [Homo sapiens]
          Length = 490

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 13/65 (20%)

Query: 70  QAVLYIWELGDDKFIQRGFHVGLWQSCEESLN-GEDEKCRSFRSVVPAEEQGVLWLSIGG 128
           QA L ++E  DD            Q C E++  G  EKC+  R+++  + + +L  S G 
Sbjct: 45  QAQLLVYENEDD------------QKCVETVELGSYEKCQDLRALLKRKHRFILLRSPGN 92

Query: 129 EVLDI 133
           +V DI
Sbjct: 93  KVSDI 97


>gi|10938016 claudin 11 [Homo sapiens]
          Length = 207

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 30/134 (22%), Positives = 44/134 (32%)

Query: 91  GLWQSCEESLNGEDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLGSRVSCR 150
           GLW  C  +      K      ++P   Q    L I   VL +  IL    +L      +
Sbjct: 51  GLWADCVMATGLYHCKPLVDILILPGYVQACRALMIAASVLGLPAILLLLTVLPCIRMGQ 110

Query: 151 SPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGWSYCLA 210
            PG    R   L  + ++L  L  +VA + +         +    +       G   CL 
Sbjct: 111 EPGVAKYRRAQLAGVLLILLALCALVATIWFPVCAHRETTIVSFGYSLYAGWIGAVLCLV 170

Query: 211 WGSFALCLAVSVSA 224
            G   LC A    A
Sbjct: 171 GGCVILCCAGDAQA 184


>gi|11225266 transient receptor potential cation channel, subfamily
           M, member 5 [Homo sapiens]
          Length = 1165

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 19/65 (29%), Positives = 29/65 (44%)

Query: 138 TSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWK 197
           T  +LL    SC S   +WL +  LV   +V   LL  +   M++  FQ+        WK
Sbjct: 935 THPLLLEDSPSCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWK 994

Query: 198 PQTWD 202
            Q ++
Sbjct: 995 FQRYN 999


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.135    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,347,218
Number of Sequences: 37866
Number of extensions: 539332
Number of successful extensions: 1221
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1195
Number of HSP's gapped (non-prelim): 30
length of query: 293
length of database: 18,247,518
effective HSP length: 101
effective length of query: 192
effective length of database: 14,423,052
effective search space: 2769225984
effective search space used: 2769225984
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.