Name: TRPM5 | Sequence: fasta or formatted (1165aa) | NCBI GI: 11225266 | |
Description: transient receptor potential cation channel, subfamily M, member 5
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Referenced in: Calcium and TRP Cation Channels
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.0 93 3 C cysteine 1.5 17 1 D aspartate 5.4 63 2 E glutamate 7.0 82 2 F phenylalanine 5.3 62 3 G glycine 6.9 80 3 H histidine 2.7 31 1 I isoleucine 3.2 37 2 K lysine 4.6 54 2 L leucine 13.2 154 3 M methionine 1.6 19 2 N asparagine 2.3 27 1 P proline 5.1 59 3 Q glutamine 4.2 49 2 R arginine 6.9 80 3 S serine 5.5 64 2 T threonine 4.2 49 2 V valine 8.2 95 2 W tryptophan 2.1 25 2 Y tyrosine 2.1 25 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 transient receptor potential cation channel, subfami... TRPM4 0.384 transient receptor potential cation channel, subfami... TRPM2 0.315 transient receptor potential cation channel, subfamil... TRPM8 0.235 transient receptor potential cation channel, subfam... TRPM3 0.191 transient receptor potential cation channel, subfam... TRPM3 0.190 transient receptor potential cation channel, subfam... TRPM3 0.190 transient receptor potential cation channel, subfam... TRPM3 0.189 transient receptor potential cation channel, subfam... TRPM3 0.189 transient receptor potential cation channel, subfam... TRPM3 0.187 transient receptor potential cation channel, subfam... TRPM3 0.187 transient receptor potential cation channel, subfam... TRPM6 0.173 transient receptor potential cation channel, subfami... TRPM7 0.169 transient receptor potential cation channel, subfam... TRPM1 0.125 transient receptor potential cation channel, subfami... TRPM3 0.043 transient receptor potential cation channel, subfami... TRPM3 0.041 transient receptor potential cation channel, subfami... TRPC5 0.019 transient receptor potential cation channel, subfamil... TRPC4 0.017 transient receptor potential cation channel, subfam... TRPC4 0.017 transient receptor potential cation channel, subfam... TRPC4 0.017 transient receptor potential cation channel, subfam... TRPC4 0.017 transient receptor potential cation channel, subfam... TRPC4 0.017 transient receptor potential cation channel, subfamil... TRPV4 0.014 transient receptor potential cation channel, subfami... TRPV3 0.012 transient receptor potential cation channel, subfami... TRPV4 0.011 transient receptor potential cation channel, subfami... TRPC6 0.010 transient receptor potential cation channel, subfamil... TRPC4 0.009 transient receptor potential cation channel, subfam... TRPC7 0.009 transient receptor potential cation channel, subfamil... TRPC3 0.009 transient receptor potential cation channel, subfam... TRPC3 0.009 transient receptor potential cation channel, subfamil...Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.