BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169210342 PREDICTED: hypothetical protein [Homo sapiens] (136 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169210342 PREDICTED: hypothetical protein [Homo sapiens] 286 4e-78 gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 276 5e-75 gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 38 0.002 gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 37 0.006 gi|169184221 PREDICTED: family with sequence similarity 27, memb... 37 0.006 gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 37 0.006 gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 36 0.011 gi|55741709 RNA binding motif protein 25 [Homo sapiens] 35 0.014 gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 35 0.025 gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 35 0.025 gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 35 0.025 gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 35 0.025 gi|239752497 PREDICTED: similar to family with sequence similari... 34 0.042 gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 33 0.072 gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 33 0.072 gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 33 0.072 gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 33 0.072 gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 32 0.12 gi|34878777 ring finger protein 20 [Homo sapiens] 32 0.12 gi|223278381 ribosomal RNA processing 12 homolog isoform 2 [Homo... 32 0.16 gi|223278379 ribosomal RNA processing 12 homolog isoform 1 [Homo... 32 0.16 gi|155030242 WD repeat domain 60 [Homo sapiens] 32 0.21 gi|55750053 atrophin-1 [Homo sapiens] 31 0.27 gi|55750041 atrophin-1 [Homo sapiens] 31 0.27 gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 31 0.36 gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 30 0.46 gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 30 0.46 gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 30 0.46 gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 30 0.46 gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 30 0.46 >gi|169210342 PREDICTED: hypothetical protein [Homo sapiens] Length = 136 Score = 286 bits (732), Expect = 4e-78 Identities = 136/136 (100%), Positives = 136/136 (100%) Query: 1 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK Sbjct: 1 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60 Query: 61 NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA 120 NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA Sbjct: 61 NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA 120 Query: 121 EDPGKPMCISSLSLKT 136 EDPGKPMCISSLSLKT Sbjct: 121 EDPGKPMCISSLSLKT 136 >gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] Length = 135 Score = 276 bits (705), Expect = 5e-75 Identities = 133/136 (97%), Positives = 134/136 (98%), Gaps = 1/136 (0%) Query: 1 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK Sbjct: 1 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60 Query: 61 NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA 120 NCKLNHYKSRILCTHTHTHTHTENERES ER+ ERERERERDWLKELCSLRIPKIYSLEA Sbjct: 61 NCKLNHYKSRILCTHTHTHTHTENERES-ERETERERERERDWLKELCSLRIPKIYSLEA 119 Query: 121 EDPGKPMCISSLSLKT 136 EDPGKPMCISSLSLKT Sbjct: 120 EDPGKPMCISSLSLKT 135 >gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] Length = 953 Score = 38.1 bits (87), Expect = 0.002 Identities = 18/30 (60%), Positives = 20/30 (66%) Query: 77 HTHTHTENERESGERQRERERERERDWLKE 106 H + E ERE RQRERERERERD +E Sbjct: 399 HNYRERERERERENRQRERERERERDRERE 428 Score = 35.0 bits (79), Expect = 0.019 Identities = 14/28 (50%), Positives = 20/28 (71%) Query: 75 HTHTHTHTENERESGERQRERERERERD 102 H + E ERE+ +R+RERERER+R+ Sbjct: 399 HNYRERERERERENRQRERERERERDRE 426 Score = 31.2 bits (69), Expect = 0.27 Identities = 15/24 (62%), Positives = 17/24 (70%) Query: 83 ENERESGERQRERERERERDWLKE 106 E +RE RQRERERERE + KE Sbjct: 422 ERDRERERRQREREREREHERDKE 445 Score = 29.3 bits (64), Expect = 1.0 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 83 ENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKPMCISSLSLK 135 E +R+ +R RE+ERE+E+ K R P+ S +AE P K + +K Sbjct: 462 EKDRQHRDRDREKEREKEKGKPKP----RSPQPPSRQAEPPKKEAATTGPQVK 510 Score = 27.7 bits (60), Expect = 3.0 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 9/33 (27%) Query: 83 ENERESGERQRERERERER---------DWLKE 106 + ERE +R+RERERE ER +W +E Sbjct: 424 DRERERRQREREREREHERDKERQRRKEEWERE 456 Score = 27.3 bits (59), Expect = 3.9 Identities = 11/20 (55%), Positives = 15/20 (75%) Query: 83 ENERESGERQRERERERERD 102 E ER+ +R+RERERER+ Sbjct: 420 ERERDRERERRQRERERERE 439 Score = 26.6 bits (57), Expect = 6.7 Identities = 12/20 (60%), Positives = 14/20 (70%) Query: 81 HTENERESGERQRERERERE 100 +TE E R+RERERERE Sbjct: 392 YTETEPYHNYRERERERERE 411 >gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial [Homo sapiens] Length = 213 Score = 36.6 bits (83), Expect = 0.006 Identities = 16/28 (57%), Positives = 19/28 (67%) Query: 79 HTHTENERESGERQRERERERERDWLKE 106 HTHTE E +R+R RE +RERD KE Sbjct: 9 HTHTETETMDRQRERRRETDRERDRAKE 36 Score = 33.1 bits (74), Expect = 0.072 Identities = 14/25 (56%), Positives = 17/25 (68%) Query: 77 HTHTHTENERESGERQRERERERER 101 HTHT TE ER+RE +RER+R Sbjct: 9 HTHTETETMDRQRERRRETDRERDR 33 Score = 32.0 bits (71), Expect = 0.16 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query: 76 THTHTHTENERESG-ERQRERERERERDWLKEL 107 T HT T+ ER+ ER+ ER R+RER+ KE+ Sbjct: 98 TDRHTETDRERQKQKEREMERVRDREREKQKEM 130 Score = 29.3 bits (64), Expect = 1.0 Identities = 12/21 (57%), Positives = 15/21 (71%) Query: 82 TENERESGERQRERERERERD 102 TE+ +RQR+RER RERD Sbjct: 39 TEDRHSERDRQRDRERNRERD 59 Score = 28.9 bits (63), Expect = 1.4 Identities = 12/21 (57%), Positives = 17/21 (80%) Query: 82 TENERESGERQRERERERERD 102 T ER++ +R RERERER+R+ Sbjct: 154 TGRERKTEDRHRERERERKRE 174 Score = 28.9 bits (63), Expect = 1.4 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 77 HTHTHTENERESG-ERQRERERERERD 102 HT E +RE+ +R R+RE ERERD Sbjct: 187 HTDMERERQRETDRKRDRQRESERERD 213 Score = 28.5 bits (62), Expect = 1.8 Identities = 13/19 (68%), Positives = 17/19 (89%), Gaps = 1/19 (5%) Query: 83 ENERESGERQRERERERER 101 + +RE GERQRERER+R+R Sbjct: 67 QTDRE-GERQRERERDRDR 84 Score = 28.5 bits (62), Expect = 1.8 Identities = 13/27 (48%), Positives = 18/27 (66%) Query: 80 THTENERESGERQRERERERERDWLKE 106 T E + E R+RERER+RER+ +E Sbjct: 154 TGRERKTEDRHRERERERKRERERKRE 180 Score = 27.7 bits (60), Expect = 3.0 Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%) Query: 81 HTENERESG-ERQRERERERERD 102 H+E +R+ ER RER+R+RER+ Sbjct: 43 HSERDRQRDRERNRERDRDRERE 65 Score = 26.9 bits (58), Expect = 5.1 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 59 QKNCKLNHYKSRILCTHTHTHTHTENERE-SGERQRERERERERDWLKE 106 Q++ + N + R T E +RE +R R+RE ERERD +E Sbjct: 49 QRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERERDKERE 97 >gi|169184221 PREDICTED: family with sequence similarity 27, member E3 [Homo sapiens] Length = 113 Score = 36.6 bits (83), Expect = 0.006 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Query: 74 THTHTHTHTENERESGERQRERERERER 101 THTHT THT+ +RE ER +R R+RER Sbjct: 68 THTHTGTHTQTDRER-ERNTQRLRDRER 94 >gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] Length = 113 Score = 36.6 bits (83), Expect = 0.006 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Query: 74 THTHTHTHTENERESGERQRERERERER 101 THTHT THT+ +RE ER +R R+RER Sbjct: 68 THTHTGTHTQTDRER-ERNTQRLRDRER 94 >gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo sapiens] Length = 228 Score = 35.8 bits (81), Expect = 0.011 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 4/37 (10%) Query: 73 CTHTHTHTHTENERESGERQ----RERERERERDWLK 105 C THT T+ +R+ G R+ RE ERERER+ LK Sbjct: 53 CVPRRTHTQTDRDRKRGRRKEREGREGERERERERLK 89 >gi|55741709 RNA binding motif protein 25 [Homo sapiens] Length = 843 Score = 35.4 bits (80), Expect = 0.014 Identities = 17/24 (70%), Positives = 19/24 (79%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RERERERER+ KE Sbjct: 317 ERERERREREREREREREREKEKE 340 Score = 33.5 bits (75), Expect = 0.055 Identities = 16/24 (66%), Positives = 18/24 (75%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE R+RERERERER+ KE Sbjct: 315 ERERERERREREREREREREREKE 338 Score = 31.6 bits (70), Expect = 0.21 Identities = 14/24 (58%), Positives = 18/24 (75%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ER ER+RERERERE++ +E Sbjct: 319 ERERREREREREREREREKEKERE 342 Score = 31.2 bits (69), Expect = 0.27 Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Query: 83 ENERESG-ERQRERERERERDWLKE 106 E ERE ER+RERER+R+RD KE Sbjct: 332 EREREKEKERERERERDRDRDRTKE 356 Score = 30.8 bits (68), Expect = 0.36 Identities = 14/19 (73%), Positives = 16/19 (84%) Query: 83 ENERESGERQRERERERER 101 E E+E ER+RERERERER Sbjct: 304 EIEKERRERERERERERER 322 Score = 30.8 bits (68), Expect = 0.36 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 56 SQCQKNCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKE 106 S K+ + KSR E ERE ER+RERERERER+ +E Sbjct: 375 SDRNKDRSRSREKSRDRERERERERERERERER-ERERERERERERERERE 424 Score = 30.4 bits (67), Expect = 0.46 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RERERERER+ +E Sbjct: 404 ERERER-ERERERERERERERERE 426 Score = 30.4 bits (67), Expect = 0.46 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RERERERER+ K+ Sbjct: 406 ERERER-EREREREREREREREKD 428 Score = 30.0 bits (66), Expect = 0.61 Identities = 14/24 (58%), Positives = 17/24 (70%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE +RERERERER+ +E Sbjct: 313 ERERERERERRERERERERERERE 336 Score = 28.1 bits (61), Expect = 2.3 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 10/44 (22%) Query: 69 SRILCTHTHTHTHTENER----------ESGERQRERERERERD 102 SR + TH E E+ E R+RERERERER+ Sbjct: 278 SREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERE 321 Score = 28.1 bits (61), Expect = 2.3 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RERE+E+ER+ +E Sbjct: 324 ERERER-EREREREKEKERERERE 346 Score = 26.6 bits (57), Expect = 6.7 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 5/29 (17%) Query: 83 ENERESGERQRERER-----ERERDWLKE 106 E ER ER+RERER ERER+ +E Sbjct: 306 EKERRERERERERERERRERERERERERE 334 Score = 26.6 bits (57), Expect = 6.7 Identities = 11/24 (45%), Positives = 16/24 (66%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ER+RERERE+E++ +E Sbjct: 321 ERREREREREREREREKEKERERE 344 Score = 26.6 bits (57), Expect = 6.7 Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%) Query: 83 ENERESGERQRERERERERD 102 E ERE ER+RERE++++RD Sbjct: 414 ERERER-EREREREKDKKRD 432 >gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] Length = 126 Score = 34.7 bits (78), Expect = 0.025 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%) Query: 62 CKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101 C H + + TH HT THT+ +RE ER +R R+RER Sbjct: 60 CCTGHIRPK---THLHTGTHTQTDRER-ERNTQRLRDRER 95 >gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] Length = 126 Score = 34.7 bits (78), Expect = 0.025 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%) Query: 62 CKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101 C H + + TH HT THT+ +RE ER +R R+RER Sbjct: 60 CCTGHIRPK---THLHTGTHTQTDRER-ERNTQRLRDRER 95 >gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] Length = 126 Score = 34.7 bits (78), Expect = 0.025 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%) Query: 62 CKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101 C H + + TH HT THT+ +RE ER +R R+RER Sbjct: 60 CCTGHIRPK---THLHTGTHTQTDRER-ERNTQRLRDRER 95 >gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] Length = 1564 Score = 34.7 bits (78), Expect = 0.025 Identities = 16/24 (66%), Positives = 19/24 (79%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RERERERER+ +E Sbjct: 750 EREREERERERERERERERERERE 773 Score = 34.3 bits (77), Expect = 0.032 Identities = 16/24 (66%), Positives = 19/24 (79%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RERERERER+ +E Sbjct: 748 EREREREERERERERERERERERE 771 Score = 31.2 bits (69), Expect = 0.27 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RERERERER+ +E Sbjct: 757 ERERER-ERERERERERERERARE 779 Score = 30.8 bits (68), Expect = 0.36 Identities = 14/24 (58%), Positives = 17/24 (70%) Query: 83 ENERESGERQRERERERERDWLKE 106 E E ER+RERERERER+ +E Sbjct: 752 EREERERERERERERERERERERE 775 Score = 30.4 bits (67), Expect = 0.46 Identities = 14/24 (58%), Positives = 17/24 (70%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE +RERERERER+ +E Sbjct: 746 EKEREREREERERERERERERERE 769 Score = 30.4 bits (67), Expect = 0.46 Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%) Query: 83 ENERESGERQRERERERERDW 103 E ERE R+R++ERER+RDW Sbjct: 771 ERERERA-RERDKERERQRDW 790 Score = 29.6 bits (65), Expect = 0.79 Identities = 15/24 (62%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 + ERE +R+RERERERERD +E Sbjct: 680 DRERER-DRERERERERERDRERE 702 Score = 29.6 bits (65), Expect = 0.79 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%) Query: 83 ENERESGERQRERERERERDWLKEL 107 E +RE ER+RERER+RER+ +EL Sbjct: 684 ERDRER-ERERERERDREREKEREL 707 Score = 29.6 bits (65), Expect = 0.79 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RERER RERD +E Sbjct: 763 ERERER-ERERERERARERDKERE 785 Score = 28.5 bits (62), Expect = 1.8 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+R+RERE+ER+ +E Sbjct: 688 ERERER-ERERDREREKERELERE 710 Score = 28.1 bits (61), Expect = 2.3 Identities = 14/20 (70%), Positives = 16/20 (80%), Gaps = 1/20 (5%) Query: 83 ENERESGERQRERERERERD 102 E ERE ER RE+ERERER+ Sbjct: 736 ERERER-ERDREKERERERE 754 Score = 27.3 bits (59), Expect = 3.9 Identities = 11/38 (28%), Positives = 20/38 (52%) Query: 74 THTHTHTHTENERESGERQRERERERERDWLKELCSLR 111 + +H H E G+R RE++ ER++ ++ S R Sbjct: 407 SQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSR 444 Score = 27.3 bits (59), Expect = 3.9 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 3/23 (13%) Query: 83 ENERESG---ERQRERERERERD 102 E ERE ER+RE+ER+RERD Sbjct: 706 ELERERAREREREREKERDRERD 728 Score = 27.3 bits (59), Expect = 3.9 Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE E++R+RER+R+RD +E Sbjct: 714 ERERER-EKERDRERDRDRDHDRE 736 Score = 27.3 bits (59), Expect = 3.9 Identities = 12/18 (66%), Positives = 15/18 (83%) Query: 90 ERQRERERERERDWLKEL 107 +R RERERERERD ++L Sbjct: 1338 DRLRERERERERDKRRDL 1355 Score = 26.9 bits (58), Expect = 5.1 Identities = 12/17 (70%), Positives = 14/17 (82%) Query: 90 ERQRERERERERDWLKE 106 ER RER+RERERD +E Sbjct: 674 ERARERDRERERDRERE 690 Score = 26.9 bits (58), Expect = 5.1 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E +R+ + RERERERERD KE Sbjct: 726 ERDRDR-DHDRERERERERDREKE 748 Score = 26.2 bits (56), Expect = 8.8 Identities = 10/24 (41%), Positives = 18/24 (75%) Query: 83 ENERESGERQRERERERERDWLKE 106 ++ R+ R+R+RERER+R+ +E Sbjct: 669 DDRRDERARERDRERERDRERERE 692 Score = 26.2 bits (56), Expect = 8.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 85 ERESGERQRERERERERDWLKE 106 + + ER RERER+RER+ +E Sbjct: 673 DERARERDRERERDRERERERE 694 Score = 26.2 bits (56), Expect = 8.8 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE +R+RE+ERE ER+ +E Sbjct: 692 ERERER-DREREKERELERERARE 714 Score = 26.2 bits (56), Expect = 8.8 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER RER+R+R+ D +E Sbjct: 716 EREREK-ERDRERDRDRDHDRERE 738 Score = 26.2 bits (56), Expect = 8.8 Identities = 12/24 (50%), Positives = 20/24 (83%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 +++RE ER+RER+RE+ER+ +E Sbjct: 732 DHDRER-ERERERDREKERERERE 754 >gi|239752497 PREDICTED: similar to family with sequence similarity 27, member D1, partial [Homo sapiens] Length = 122 Score = 33.9 bits (76), Expect = 0.042 Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Query: 74 THTHTHTHTENERESGERQRERERERE-RDW 103 THTHT HT+ RE ER +R R+RE R+W Sbjct: 69 THTHTGIHTQTHRER-ERNTQRLRDRERREW 98 Score = 28.5 bits (62), Expect = 1.8 Identities = 10/14 (71%), Positives = 11/14 (78%) Query: 75 HTHTHTHTENERES 88 HTHTHTHTE +S Sbjct: 101 HTHTHTHTETHTQS 114 Score = 26.2 bits (56), Expect = 8.8 Identities = 9/17 (52%), Positives = 11/17 (64%) Query: 74 THTHTHTHTENERESGE 90 THTHTHT T + + E Sbjct: 102 THTHTHTETHTQSHTAE 118 >gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens] Length = 1341 Score = 33.1 bits (74), Expect = 0.072 Identities = 16/43 (37%), Positives = 23/43 (53%) Query: 59 QKNCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101 ++N +L K R E ER+ G+R R+RER+RER Sbjct: 1270 ERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRER 1312 Score = 30.0 bits (66), Expect = 0.61 Identities = 16/21 (76%), Positives = 16/21 (76%), Gaps = 1/21 (4%) Query: 83 ENERE-SGERQRERERERERD 102 E RE S ER RERERERERD Sbjct: 1278 EKRREHSRERDRERERERERD 1298 >gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] Length = 122 Score = 33.1 bits (74), Expect = 0.072 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Query: 74 THTHTHTHTENERESGERQRERERERER 101 TH HT THT+ RE ER +R R+RER Sbjct: 69 THKHTGTHTQTHRE-WERNTQRLRDRER 95 Score = 29.3 bits (64), Expect = 1.0 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 74 THTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126 T THT TH E ER + QR R+RER + + +L+ PG P Sbjct: 73 TGTHTQTHREWERNT---QRLRDRERRENGRHTHTQTKGHTAEALKHTPPGNP 122 >gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo sapiens] Length = 122 Score = 33.1 bits (74), Expect = 0.072 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Query: 74 THTHTHTHTENERESGERQRERERERER 101 TH HT THT+ RE ER +R R+RER Sbjct: 69 THKHTGTHTQTHRE-WERNTQRLRDRER 95 Score = 29.3 bits (64), Expect = 1.0 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 74 THTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126 T THT TH E ER + QR R+RER + + +L+ PG P Sbjct: 73 TGTHTQTHREWERNT---QRLRDRERRENGRHTHTQTKGHTAEALKHTPPGNP 122 >gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo sapiens] Length = 122 Score = 33.1 bits (74), Expect = 0.072 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Query: 74 THTHTHTHTENERESGERQRERERERER 101 TH HT THT+ RE ER +R R+RER Sbjct: 69 THKHTGTHTQTHRE-WERNTQRLRDRER 95 Score = 29.3 bits (64), Expect = 1.0 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 74 THTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126 T THT TH E ER + QR R+RER + + +L+ PG P Sbjct: 73 TGTHTQTHREWERNT---QRLRDRERRENGRHTHTQTKGHTAEALKHTPPGNP 122 >gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo sapiens] Length = 600 Score = 32.3 bits (72), Expect = 0.12 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Query: 68 KSRILCTHTHTHTHTENERESG---ERQRERERERERDWLKE 106 K R T TE +RE+ ERQRERERERER+ +E Sbjct: 277 KERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRE 318 Score = 29.6 bits (65), Expect = 0.79 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER+RER+RE ERD KE Sbjct: 318 ERERER-ERERERQRETERDREKE 340 Score = 29.3 bits (64), Expect = 1.0 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Query: 83 ENERESG-ERQRERERERERDWLKE 106 E ERE +R+RERERERER+ +E Sbjct: 308 ERERERNRKRERERERERERERQRE 332 Score = 29.3 bits (64), Expect = 1.0 Identities = 12/24 (50%), Positives = 17/24 (70%) Query: 83 ENERESGERQRERERERERDWLKE 106 E +R+S + ERER+R+RD KE Sbjct: 376 ERDRQSAREREERERDRDRDRQKE 399 Score = 28.9 bits (63), Expect = 1.4 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%) Query: 78 THTHTENERESG---ERQRERERERERDWLKELCSLR 111 T T TE +R++ +RQR+ ERERE+ +E S R Sbjct: 218 TETETERKRQTDRERDRQRKTEREREKQAERERASER 254 Score = 28.9 bits (63), Expect = 1.4 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 59 QKNCKLNHYKSRILCTHTHTHTHTENERESG-------ERQRERERERERDWLKE 106 Q+ + + K R T E R++G ER+RERERER+R +E Sbjct: 330 QRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSARE 384 Score = 27.7 bits (60), Expect = 3.0 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Query: 75 HTHTHTHTENERE-SGERQRERERERERDWLKE 106 H E ERE +R+R+R+RE+ER+ KE Sbjct: 94 HRERQRDREKERERQTDRERDRQREKERNRQKE 126 Score = 27.7 bits (60), Expect = 3.0 Identities = 13/19 (68%), Positives = 17/19 (89%), Gaps = 1/19 (5%) Query: 84 NERESGERQRERERERERD 102 +ERE+ ER +ERERER+RD Sbjct: 252 SERET-ERDKERERERDRD 269 Score = 27.7 bits (60), Expect = 3.0 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Query: 76 THTHTHTENERE-SGERQRERERERERDWLKE 106 T TE +RE ER+RERER R+R+ +E Sbjct: 291 TERDRETERKRERQRERERERERNRKRERERE 322 Score = 27.3 bits (59), Expect = 3.9 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Query: 82 TENERES-GERQRERERERERDWLKE 106 TE ERE ER+R ERE ERD +E Sbjct: 238 TEREREKQAERERASERETERDKERE 263 Score = 27.3 bits (59), Expect = 3.9 Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%) Query: 83 ENERESGERQRERERERERD 102 E ER+ ER+RER+R+R+RD Sbjct: 255 ETERDK-ERERERDRDRDRD 273 Score = 26.9 bits (58), Expect = 5.1 Identities = 10/18 (55%), Positives = 15/18 (83%) Query: 85 ERESGERQRERERERERD 102 ERE ER R+R+R++ER+ Sbjct: 384 EREERERDRDRDRQKERE 401 Score = 26.9 bits (58), Expect = 5.1 Identities = 11/21 (52%), Positives = 18/21 (85%), Gaps = 1/21 (4%) Query: 82 TENERESGERQRERERERERD 102 TE +R+ G+R+ E++RERE+D Sbjct: 404 TEKDRD-GQRETEKQREREKD 423 Score = 26.6 bits (57), Expect = 6.7 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 81 HTENERESGERQRERERERERDWLKE 106 H + +R ERQR+RE+ERER +E Sbjct: 88 HRKRDRHR-ERQRDREKERERQTDRE 112 Score = 26.2 bits (56), Expect = 8.8 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 56 SQCQKNCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERD 102 ++ ++ + + + R T E ER S ER+ ER++ERER+ Sbjct: 220 TETERKRQTDRERDRQRKTEREREKQAERERAS-ERETERDKERERE 265 >gi|34878777 ring finger protein 20 [Homo sapiens] Length = 975 Score = 32.3 bits (72), Expect = 0.12 Identities = 15/24 (62%), Positives = 18/24 (75%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE R++ERERERER+ KE Sbjct: 566 EEERERERREKEREREREREKEKE 589 Score = 32.0 bits (71), Expect = 0.16 Identities = 14/24 (58%), Positives = 19/24 (79%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE E++RERERERE++ +E Sbjct: 568 ERERERREKEREREREREKEKERE 591 Score = 30.8 bits (68), Expect = 0.36 Identities = 14/29 (48%), Positives = 20/29 (68%) Query: 83 ENERESGERQRERERERERDWLKELCSLR 111 E ER ER+RERERE+E++ +E L+ Sbjct: 570 ERERREKEREREREREKEKEREREKQKLK 598 Score = 30.0 bits (66), Expect = 0.61 Identities = 15/24 (62%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 83 ENERESGERQRERERERERDWLKE 106 E ERE ER++E+ERERE+ LKE Sbjct: 577 ERERER-EREKEKEREREKQKLKE 599 Score = 26.6 bits (57), Expect = 6.7 Identities = 12/23 (52%), Positives = 16/23 (69%) Query: 84 NERESGERQRERERERERDWLKE 106 +E E +RE+ERERER+ KE Sbjct: 565 DEEERERERREKEREREREREKE 587 >gi|223278381 ribosomal RNA processing 12 homolog isoform 2 [Homo sapiens] Length = 1236 Score = 32.0 bits (71), Expect = 0.16 Identities = 15/36 (41%), Positives = 19/36 (52%) Query: 71 ILCTHTHTHTHTENERESGERQRERERERERDWLKE 106 IL + E ER G+ QR+ R+R R WLKE Sbjct: 1015 ILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKE 1050 >gi|223278379 ribosomal RNA processing 12 homolog isoform 1 [Homo sapiens] Length = 1297 Score = 32.0 bits (71), Expect = 0.16 Identities = 15/36 (41%), Positives = 19/36 (52%) Query: 71 ILCTHTHTHTHTENERESGERQRERERERERDWLKE 106 IL + E ER G+ QR+ R+R R WLKE Sbjct: 1076 ILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKE 1111 >gi|155030242 WD repeat domain 60 [Homo sapiens] Length = 1066 Score = 31.6 bits (70), Expect = 0.21 Identities = 13/22 (59%), Positives = 15/22 (68%) Query: 81 HTENERESGERQRERERERERD 102 HT E GER R+R+RER RD Sbjct: 74 HTAKESPRGERDRDRQRERRRD 95 Score = 26.2 bits (56), Expect = 8.8 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 5/33 (15%) Query: 79 HTHTENERESGERQRERER-----ERERDWLKE 106 HT E+ R +R R+RER +RE++ LKE Sbjct: 74 HTAKESPRGERDRDRQRERRRDAKDREKEKLKE 106 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 31.2 bits (69), Expect = 0.27 Identities = 14/24 (58%), Positives = 18/24 (75%) Query: 83 ENERESGERQRERERERERDWLKE 106 + RE ER+RERERE+ER+ KE Sbjct: 809 QRAREEKEREREREREKEREREKE 832 Score = 29.6 bits (65), Expect = 0.79 Identities = 13/23 (56%), Positives = 18/23 (78%) Query: 85 ERESGERQRERERERERDWLKEL 107 E + ER+RERE+ERER+ +EL Sbjct: 813 EEKEREREREREKEREREKEREL 835 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 31.2 bits (69), Expect = 0.27 Identities = 14/24 (58%), Positives = 18/24 (75%) Query: 83 ENERESGERQRERERERERDWLKE 106 + RE ER+RERERE+ER+ KE Sbjct: 809 QRAREEKEREREREREKEREREKE 832 Score = 29.6 bits (65), Expect = 0.79 Identities = 13/23 (56%), Positives = 18/23 (78%) Query: 85 ERESGERQRERERERERDWLKEL 107 E + ER+RERE+ERER+ +EL Sbjct: 813 EEKEREREREREKEREREKEREL 835 >gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo sapiens] Length = 122 Score = 30.8 bits (68), Expect = 0.36 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 74 THTHT--HTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126 THTHT HT T ERE QR R+RER + + +L+ PG P Sbjct: 69 THTHTGMHTQTHRERER-NTQRLRDRERRENHTHTETHTQRHTEEALKHTPPGNP 122 >gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] Length = 285 Score = 30.4 bits (67), Expect = 0.46 Identities = 14/29 (48%), Positives = 18/29 (62%) Query: 78 THTHTENERESGERQRERERERERDWLKE 106 T + ERE GE +R R+RERER +E Sbjct: 156 TEKDRDREREMGETERYRDRERERQKQRE 184 Score = 29.3 bits (64), Expect = 1.0 Identities = 11/24 (45%), Positives = 18/24 (75%) Query: 83 ENERESGERQRERERERERDWLKE 106 + E+E ER R+R++ERE+D +E Sbjct: 194 QREKEDRERDRDRQKEREKDRYRE 217 Score = 27.7 bits (60), Expect = 3.0 Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%) Query: 82 TENER-ESGERQRERERERERD 102 TE ER E ERQR+R+RE++R+ Sbjct: 118 TETERQEERERQRDRKREKDRE 139 Score = 27.3 bits (59), Expect = 3.9 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Query: 78 THTHTENERESGERQRERERERERDWLKEL 107 T T + ERE +R R+RE++RER +E+ Sbjct: 118 TETERQEERER-QRDRKREKDRERQRQREI 146 Score = 27.3 bits (59), Expect = 3.9 Identities = 9/20 (45%), Positives = 17/20 (85%) Query: 83 ENERESGERQRERERERERD 102 E +RE +R+R+R+R++ER+ Sbjct: 192 ERQREKEDRERDRDRQKERE 211 Score = 27.3 bits (59), Expect = 3.9 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 5/28 (17%) Query: 85 ERESG-----ERQRERERERERDWLKEL 107 ERE+G ER RER+RE++RD K + Sbjct: 217 ERETGRDRDKERDRERQREKDRDRQKAI 244 Score = 26.6 bits (57), Expect = 6.7 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 19 TKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQKNCKLNHYKSRILCTHTHT 78 T+P+S + +R +R + +LR G P + + ++ + + R H Sbjct: 26 TRPVSWRLAMRSQIEDRD---VLILR--GSRVAPAIIRERERQRERERQRKRAKERHREK 80 Query: 79 HTHTENERESGERQRERERERERD 102 E +R+ +R+R+RER+R RD Sbjct: 81 DREIEKDRDR-QRKRDRERQRWRD 103 Score = 26.2 bits (56), Expect = 8.8 Identities = 11/17 (64%), Positives = 14/17 (82%) Query: 90 ERQRERERERERDWLKE 106 ER+R+RERER+R KE Sbjct: 59 ERERQRERERQRKRAKE 75 >gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] Length = 126 Score = 30.4 bits (67), Expect = 0.46 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 5/30 (16%) Query: 74 THTHT--HTHTENERESGERQRERERERER 101 THTHT HT T ER ER +R R+RER Sbjct: 69 THTHTGIHTQTHRER---ERNTQRLRDRER 95 >gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo sapiens] Length = 124 Score = 30.4 bits (67), Expect = 0.46 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 5/30 (16%) Query: 74 THTHT--HTHTENERESGERQRERERERER 101 THTHT HT T ER ER +R R+RER Sbjct: 69 THTHTGMHTQTHRER---ERNTQRLRDRER 95 Score = 28.5 bits (62), Expect = 1.8 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%) Query: 74 THT--HTHTHTENERESGERQRERERERERD 102 THT HT TH E ER + QR R+RER + Sbjct: 71 THTGMHTQTHRERERNT---QRLRDRERREN 98 >gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo sapiens] Length = 125 Score = 30.4 bits (67), Expect = 0.46 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 5/30 (16%) Query: 74 THTHT--HTHTENERESGERQRERERERER 101 THTHT HT T ER ER +R R+RER Sbjct: 69 THTHTGMHTQTHRER---ERNTQRLRDRER 95 Score = 28.5 bits (62), Expect = 1.8 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%) Query: 74 THT--HTHTHTENERESGERQRERERERERD 102 THT HT TH E ER + QR R+RER + Sbjct: 71 THTGMHTQTHRERERNT---QRLRDRERREN 98 >gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] Length = 126 Score = 30.4 bits (67), Expect = 0.46 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 5/30 (16%) Query: 74 THTHT--HTHTENERESGERQRERERERER 101 THTHT HT T ER ER +R R+RER Sbjct: 69 THTHTGIHTQTHRER---ERNTQRLRDRER 95 Score = 29.6 bits (65), Expect = 0.79 Identities = 10/16 (62%), Positives = 12/16 (75%) Query: 75 HTHTHTHTENERESGE 90 HTHTHTHT +R + E Sbjct: 101 HTHTHTHTHTQRHTAE 116 Score = 28.5 bits (62), Expect = 1.8 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%) Query: 74 THT--HTHTHTENERESGERQRERERERERD 102 THT HT TH E ER + QR R+RER + Sbjct: 71 THTGIHTQTHRERERNT---QRLRDRERREN 98 Score = 27.3 bits (59), Expect = 3.9 Identities = 9/10 (90%), Positives = 10/10 (100%) Query: 74 THTHTHTHTE 83 THTHTHTHT+ Sbjct: 102 THTHTHTHTQ 111 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.135 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,443,341 Number of Sequences: 37866 Number of extensions: 230193 Number of successful extensions: 2964 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 44 Number of HSP's that attempted gapping in prelim test: 1650 Number of HSP's gapped (non-prelim): 960 length of query: 136 length of database: 18,247,518 effective HSP length: 91 effective length of query: 45 effective length of database: 14,801,712 effective search space: 666077040 effective search space used: 666077040 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.