Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 169210342

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]           286   4e-78
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]           276   5e-75
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         38   0.002
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti...    37   0.006
gi|169184221 PREDICTED: family with sequence similarity 27, memb...    37   0.006
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]      37   0.006
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ...    36   0.011
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                35   0.014
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]      35   0.025
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]      35   0.025
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]      35   0.025
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]        35   0.025
gi|239752497 PREDICTED: similar to family with sequence similari...    34   0.042
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    33   0.072
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]      33   0.072
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ...    33   0.072
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ...    33   0.072
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    32   0.12 
gi|34878777 ring finger protein 20 [Homo sapiens]                      32   0.12 
gi|223278381 ribosomal RNA processing 12 homolog isoform 2 [Homo...    32   0.16 
gi|223278379 ribosomal RNA processing 12 homolog isoform 1 [Homo...    32   0.16 
gi|155030242 WD repeat domain 60 [Homo sapiens]                        32   0.21 
gi|55750053 atrophin-1 [Homo sapiens]                                  31   0.27 
gi|55750041 atrophin-1 [Homo sapiens]                                  31   0.27 
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ...    31   0.36 
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]            30   0.46 
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]      30   0.46 
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ...    30   0.46 
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ...    30   0.46 
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]      30   0.46 

>gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 136

 Score =  286 bits (732), Expect = 4e-78
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60
           MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK
Sbjct: 1   MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60

Query: 61  NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA 120
           NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA
Sbjct: 61  NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA 120

Query: 121 EDPGKPMCISSLSLKT 136
           EDPGKPMCISSLSLKT
Sbjct: 121 EDPGKPMCISSLSLKT 136


>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 135

 Score =  276 bits (705), Expect = 5e-75
 Identities = 133/136 (97%), Positives = 134/136 (98%), Gaps = 1/136 (0%)

Query: 1   MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60
           MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK
Sbjct: 1   MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60

Query: 61  NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA 120
           NCKLNHYKSRILCTHTHTHTHTENERES ER+ ERERERERDWLKELCSLRIPKIYSLEA
Sbjct: 61  NCKLNHYKSRILCTHTHTHTHTENERES-ERETERERERERDWLKELCSLRIPKIYSLEA 119

Query: 121 EDPGKPMCISSLSLKT 136
           EDPGKPMCISSLSLKT
Sbjct: 120 EDPGKPMCISSLSLKT 135


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 18/30 (60%), Positives = 20/30 (66%)

Query: 77  HTHTHTENERESGERQRERERERERDWLKE 106
           H +   E ERE   RQRERERERERD  +E
Sbjct: 399 HNYRERERERERENRQRERERERERDRERE 428



 Score = 35.0 bits (79), Expect = 0.019
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 75  HTHTHTHTENERESGERQRERERERERD 102
           H +     E ERE+ +R+RERERER+R+
Sbjct: 399 HNYRERERERERENRQRERERERERDRE 426



 Score = 31.2 bits (69), Expect = 0.27
 Identities = 15/24 (62%), Positives = 17/24 (70%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E +RE   RQRERERERE +  KE
Sbjct: 422 ERDRERERRQREREREREHERDKE 445



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 83  ENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKPMCISSLSLK 135
           E +R+  +R RE+ERE+E+   K     R P+  S +AE P K    +   +K
Sbjct: 462 EKDRQHRDRDREKEREKEKGKPKP----RSPQPPSRQAEPPKKEAATTGPQVK 510



 Score = 27.7 bits (60), Expect = 3.0
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 9/33 (27%)

Query: 83  ENERESGERQRERERERER---------DWLKE 106
           + ERE  +R+RERERE ER         +W +E
Sbjct: 424 DRERERRQREREREREHERDKERQRRKEEWERE 456



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 83  ENERESGERQRERERERERD 102
           E ER+    +R+RERERER+
Sbjct: 420 ERERDRERERRQRERERERE 439



 Score = 26.6 bits (57), Expect = 6.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)

Query: 81  HTENERESGERQRERERERE 100
           +TE E     R+RERERERE
Sbjct: 392 YTETEPYHNYRERERERERE 411


>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
           [Homo sapiens]
          Length = 213

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 79  HTHTENERESGERQRERERERERDWLKE 106
           HTHTE E    +R+R RE +RERD  KE
Sbjct: 9   HTHTETETMDRQRERRRETDRERDRAKE 36



 Score = 33.1 bits (74), Expect = 0.072
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 77  HTHTHTENERESGERQRERERERER 101
           HTHT TE      ER+RE +RER+R
Sbjct: 9   HTHTETETMDRQRERRRETDRERDR 33



 Score = 32.0 bits (71), Expect = 0.16
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 76  THTHTHTENERESG-ERQRERERERERDWLKEL 107
           T  HT T+ ER+   ER+ ER R+RER+  KE+
Sbjct: 98  TDRHTETDRERQKQKEREMERVRDREREKQKEM 130



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 12/21 (57%), Positives = 15/21 (71%)

Query: 82  TENERESGERQRERERERERD 102
           TE+     +RQR+RER RERD
Sbjct: 39  TEDRHSERDRQRDRERNRERD 59



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 12/21 (57%), Positives = 17/21 (80%)

Query: 82  TENERESGERQRERERERERD 102
           T  ER++ +R RERERER+R+
Sbjct: 154 TGRERKTEDRHRERERERKRE 174



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)

Query: 77  HTHTHTENERESG-ERQRERERERERD 102
           HT    E +RE+  +R R+RE ERERD
Sbjct: 187 HTDMERERQRETDRKRDRQRESERERD 213



 Score = 28.5 bits (62), Expect = 1.8
 Identities = 13/19 (68%), Positives = 17/19 (89%), Gaps = 1/19 (5%)

Query: 83  ENERESGERQRERERERER 101
           + +RE GERQRERER+R+R
Sbjct: 67  QTDRE-GERQRERERDRDR 84



 Score = 28.5 bits (62), Expect = 1.8
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 80  THTENERESGERQRERERERERDWLKE 106
           T  E + E   R+RERER+RER+  +E
Sbjct: 154 TGRERKTEDRHRERERERKRERERKRE 180



 Score = 27.7 bits (60), Expect = 3.0
 Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)

Query: 81  HTENERESG-ERQRERERERERD 102
           H+E +R+   ER RER+R+RER+
Sbjct: 43  HSERDRQRDRERNRERDRDRERE 65



 Score = 26.9 bits (58), Expect = 5.1
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 59  QKNCKLNHYKSRILCTHTHTHTHTENERE-SGERQRERERERERDWLKE 106
           Q++ + N  + R       T    E +RE   +R R+RE ERERD  +E
Sbjct: 49  QRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERERDKERE 97


>gi|169184221 PREDICTED: family with sequence similarity 27, member
           E3 [Homo sapiens]
          Length = 113

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 74  THTHTHTHTENERESGERQRERERERER 101
           THTHT THT+ +RE  ER  +R R+RER
Sbjct: 68  THTHTGTHTQTDRER-ERNTQRLRDRER 94


>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 113

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 74  THTHTHTHTENERESGERQRERERERER 101
           THTHT THT+ +RE  ER  +R R+RER
Sbjct: 68  THTHTGTHTQTDRER-ERNTQRLRDRER 94


>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
           sapiens]
          Length = 228

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 4/37 (10%)

Query: 73  CTHTHTHTHTENERESGERQ----RERERERERDWLK 105
           C    THT T+ +R+ G R+    RE ERERER+ LK
Sbjct: 53  CVPRRTHTQTDRDRKRGRRKEREGREGERERERERLK 89


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 35.4 bits (80), Expect = 0.014
 Identities = 17/24 (70%), Positives = 19/24 (79%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RERERERER+  KE
Sbjct: 317 ERERERREREREREREREREKEKE 340



 Score = 33.5 bits (75), Expect = 0.055
 Identities = 16/24 (66%), Positives = 18/24 (75%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE   R+RERERERER+  KE
Sbjct: 315 ERERERERREREREREREREREKE 338



 Score = 31.6 bits (70), Expect = 0.21
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ER   ER+RERERERE++  +E
Sbjct: 319 ERERREREREREREREREKEKERE 342



 Score = 31.2 bits (69), Expect = 0.27
 Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 83  ENERESG-ERQRERERERERDWLKE 106
           E ERE   ER+RERER+R+RD  KE
Sbjct: 332 EREREKEKERERERERDRDRDRTKE 356



 Score = 30.8 bits (68), Expect = 0.36
 Identities = 14/19 (73%), Positives = 16/19 (84%)

Query: 83  ENERESGERQRERERERER 101
           E E+E  ER+RERERERER
Sbjct: 304 EIEKERRERERERERERER 322



 Score = 30.8 bits (68), Expect = 0.36
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 56  SQCQKNCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKE 106
           S   K+   +  KSR            E ERE  ER+RERERERER+  +E
Sbjct: 375 SDRNKDRSRSREKSRDRERERERERERERERER-ERERERERERERERERE 424



 Score = 30.4 bits (67), Expect = 0.46
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RERERERER+  +E
Sbjct: 404 ERERER-ERERERERERERERERE 426



 Score = 30.4 bits (67), Expect = 0.46
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RERERERER+  K+
Sbjct: 406 ERERER-EREREREREREREREKD 428



 Score = 30.0 bits (66), Expect = 0.61
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE    +RERERERER+  +E
Sbjct: 313 ERERERERERRERERERERERERE 336



 Score = 28.1 bits (61), Expect = 2.3
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 10/44 (22%)

Query: 69  SRILCTHTHTHTHTENER----------ESGERQRERERERERD 102
           SR +     TH   E E+          E   R+RERERERER+
Sbjct: 278 SREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERE 321



 Score = 28.1 bits (61), Expect = 2.3
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RERE+E+ER+  +E
Sbjct: 324 ERERER-EREREREKEKERERERE 346



 Score = 26.6 bits (57), Expect = 6.7
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 5/29 (17%)

Query: 83  ENERESGERQRERER-----ERERDWLKE 106
           E ER   ER+RERER     ERER+  +E
Sbjct: 306 EKERRERERERERERERRERERERERERE 334



 Score = 26.6 bits (57), Expect = 6.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E      ER+RERERE+E++  +E
Sbjct: 321 ERREREREREREREREKEKERERE 344



 Score = 26.6 bits (57), Expect = 6.7
 Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)

Query: 83  ENERESGERQRERERERERD 102
           E ERE  ER+RERE++++RD
Sbjct: 414 ERERER-EREREREKDKKRD 432


>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score = 34.7 bits (78), Expect = 0.025
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)

Query: 62  CKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101
           C   H + +   TH HT THT+ +RE  ER  +R R+RER
Sbjct: 60  CCTGHIRPK---THLHTGTHTQTDRER-ERNTQRLRDRER 95


>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score = 34.7 bits (78), Expect = 0.025
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)

Query: 62  CKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101
           C   H + +   TH HT THT+ +RE  ER  +R R+RER
Sbjct: 60  CCTGHIRPK---THLHTGTHTQTDRER-ERNTQRLRDRER 95


>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score = 34.7 bits (78), Expect = 0.025
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)

Query: 62  CKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101
           C   H + +   TH HT THT+ +RE  ER  +R R+RER
Sbjct: 60  CCTGHIRPK---THLHTGTHTQTDRER-ERNTQRLRDRER 95


>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
          Length = 1564

 Score = 34.7 bits (78), Expect = 0.025
 Identities = 16/24 (66%), Positives = 19/24 (79%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RERERERER+  +E
Sbjct: 750 EREREERERERERERERERERERE 773



 Score = 34.3 bits (77), Expect = 0.032
 Identities = 16/24 (66%), Positives = 19/24 (79%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RERERERER+  +E
Sbjct: 748 EREREREERERERERERERERERE 771



 Score = 31.2 bits (69), Expect = 0.27
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RERERERER+  +E
Sbjct: 757 ERERER-ERERERERERERERARE 779



 Score = 30.8 bits (68), Expect = 0.36
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E E    ER+RERERERER+  +E
Sbjct: 752 EREERERERERERERERERERERE 775



 Score = 30.4 bits (67), Expect = 0.46
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE    +RERERERER+  +E
Sbjct: 746 EKEREREREERERERERERERERE 769



 Score = 30.4 bits (67), Expect = 0.46
 Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%)

Query: 83  ENERESGERQRERERERERDW 103
           E ERE   R+R++ERER+RDW
Sbjct: 771 ERERERA-RERDKERERQRDW 790



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 15/24 (62%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           + ERE  +R+RERERERERD  +E
Sbjct: 680 DRERER-DRERERERERERDRERE 702



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)

Query: 83  ENERESGERQRERERERERDWLKEL 107
           E +RE  ER+RERER+RER+  +EL
Sbjct: 684 ERDRER-ERERERERDREREKEREL 707



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RERER RERD  +E
Sbjct: 763 ERERER-ERERERERARERDKERE 785



 Score = 28.5 bits (62), Expect = 1.8
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+R+RERE+ER+  +E
Sbjct: 688 ERERER-ERERDREREKERELERE 710



 Score = 28.1 bits (61), Expect = 2.3
 Identities = 14/20 (70%), Positives = 16/20 (80%), Gaps = 1/20 (5%)

Query: 83  ENERESGERQRERERERERD 102
           E ERE  ER RE+ERERER+
Sbjct: 736 ERERER-ERDREKERERERE 754



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 74  THTHTHTHTENERESGERQRERERERERDWLKELCSLR 111
           + +H   H   E   G+R RE++   ER++ ++  S R
Sbjct: 407 SQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSR 444



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 3/23 (13%)

Query: 83  ENERESG---ERQRERERERERD 102
           E ERE     ER+RE+ER+RERD
Sbjct: 706 ELERERAREREREREKERDRERD 728



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  E++R+RER+R+RD  +E
Sbjct: 714 ERERER-EKERDRERDRDRDHDRE 736



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 12/18 (66%), Positives = 15/18 (83%)

Query: 90   ERQRERERERERDWLKEL 107
            +R RERERERERD  ++L
Sbjct: 1338 DRLRERERERERDKRRDL 1355



 Score = 26.9 bits (58), Expect = 5.1
 Identities = 12/17 (70%), Positives = 14/17 (82%)

Query: 90  ERQRERERERERDWLKE 106
           ER RER+RERERD  +E
Sbjct: 674 ERARERDRERERDRERE 690



 Score = 26.9 bits (58), Expect = 5.1
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E +R+  +  RERERERERD  KE
Sbjct: 726 ERDRDR-DHDRERERERERDREKE 748



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 10/24 (41%), Positives = 18/24 (75%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           ++ R+   R+R+RERER+R+  +E
Sbjct: 669 DDRRDERARERDRERERDRERERE 692



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 85  ERESGERQRERERERERDWLKE 106
           +  + ER RERER+RER+  +E
Sbjct: 673 DERARERDRERERDRERERERE 694



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  +R+RE+ERE ER+  +E
Sbjct: 692 ERERER-DREREKERELERERARE 714



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER RER+R+R+ D  +E
Sbjct: 716 EREREK-ERDRERDRDRDHDRERE 738



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 12/24 (50%), Positives = 20/24 (83%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           +++RE  ER+RER+RE+ER+  +E
Sbjct: 732 DHDRER-ERERERDREKERERERE 754


>gi|239752497 PREDICTED: similar to family with sequence similarity
           27, member D1, partial [Homo sapiens]
          Length = 122

 Score = 33.9 bits (76), Expect = 0.042
 Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)

Query: 74  THTHTHTHTENERESGERQRERERERE-RDW 103
           THTHT  HT+  RE  ER  +R R+RE R+W
Sbjct: 69  THTHTGIHTQTHRER-ERNTQRLRDRERREW 98



 Score = 28.5 bits (62), Expect = 1.8
 Identities = 10/14 (71%), Positives = 11/14 (78%)

Query: 75  HTHTHTHTENERES 88
           HTHTHTHTE   +S
Sbjct: 101 HTHTHTHTETHTQS 114



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 74  THTHTHTHTENERESGE 90
           THTHTHT T  +  + E
Sbjct: 102 THTHTHTETHTQSHTAE 118


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
          Length = 1341

 Score = 33.1 bits (74), Expect = 0.072
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 59   QKNCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101
            ++N +L   K R            E ER+ G+R R+RER+RER
Sbjct: 1270 ERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRER 1312



 Score = 30.0 bits (66), Expect = 0.61
 Identities = 16/21 (76%), Positives = 16/21 (76%), Gaps = 1/21 (4%)

Query: 83   ENERE-SGERQRERERERERD 102
            E  RE S ER RERERERERD
Sbjct: 1278 EKRREHSRERDRERERERERD 1298


>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 122

 Score = 33.1 bits (74), Expect = 0.072
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 74  THTHTHTHTENERESGERQRERERERER 101
           TH HT THT+  RE  ER  +R R+RER
Sbjct: 69  THKHTGTHTQTHRE-WERNTQRLRDRER 95



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 74  THTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126
           T THT TH E ER +   QR R+RER  +        +     +L+   PG P
Sbjct: 73  TGTHTQTHREWERNT---QRLRDRERRENGRHTHTQTKGHTAEALKHTPPGNP 122


>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
           sapiens]
          Length = 122

 Score = 33.1 bits (74), Expect = 0.072
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 74  THTHTHTHTENERESGERQRERERERER 101
           TH HT THT+  RE  ER  +R R+RER
Sbjct: 69  THKHTGTHTQTHRE-WERNTQRLRDRER 95



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 74  THTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126
           T THT TH E ER +   QR R+RER  +        +     +L+   PG P
Sbjct: 73  TGTHTQTHREWERNT---QRLRDRERRENGRHTHTQTKGHTAEALKHTPPGNP 122


>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
           sapiens]
          Length = 122

 Score = 33.1 bits (74), Expect = 0.072
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 74  THTHTHTHTENERESGERQRERERERER 101
           TH HT THT+  RE  ER  +R R+RER
Sbjct: 69  THKHTGTHTQTHRE-WERNTQRLRDRER 95



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 74  THTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126
           T THT TH E ER +   QR R+RER  +        +     +L+   PG P
Sbjct: 73  TGTHTQTHREWERNT---QRLRDRERRENGRHTHTQTKGHTAEALKHTPPGNP 122


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 32.3 bits (72), Expect = 0.12
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 68  KSRILCTHTHTHTHTENERESG---ERQRERERERERDWLKE 106
           K R   T       TE +RE+    ERQRERERERER+  +E
Sbjct: 277 KERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRE 318



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER+RER+RE ERD  KE
Sbjct: 318 ERERER-ERERERQRETERDREKE 340



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 83  ENERESG-ERQRERERERERDWLKE 106
           E ERE   +R+RERERERER+  +E
Sbjct: 308 ERERERNRKRERERERERERERQRE 332



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E +R+S   + ERER+R+RD  KE
Sbjct: 376 ERDRQSAREREERERDRDRDRQKE 399



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 78  THTHTENERESG---ERQRERERERERDWLKELCSLR 111
           T T TE +R++    +RQR+ ERERE+   +E  S R
Sbjct: 218 TETETERKRQTDRERDRQRKTEREREKQAERERASER 254



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 59  QKNCKLNHYKSRILCTHTHTHTHTENERESG-------ERQRERERERERDWLKE 106
           Q+  + +  K R       T    E  R++G       ER+RERERER+R   +E
Sbjct: 330 QRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSARE 384



 Score = 27.7 bits (60), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 75  HTHTHTHTENERE-SGERQRERERERERDWLKE 106
           H       E ERE   +R+R+R+RE+ER+  KE
Sbjct: 94  HRERQRDREKERERQTDRERDRQREKERNRQKE 126



 Score = 27.7 bits (60), Expect = 3.0
 Identities = 13/19 (68%), Positives = 17/19 (89%), Gaps = 1/19 (5%)

Query: 84  NERESGERQRERERERERD 102
           +ERE+ ER +ERERER+RD
Sbjct: 252 SERET-ERDKERERERDRD 269



 Score = 27.7 bits (60), Expect = 3.0
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 76  THTHTHTENERE-SGERQRERERERERDWLKE 106
           T     TE +RE   ER+RERER R+R+  +E
Sbjct: 291 TERDRETERKRERQRERERERERNRKRERERE 322



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 82  TENERES-GERQRERERERERDWLKE 106
           TE ERE   ER+R  ERE ERD  +E
Sbjct: 238 TEREREKQAERERASERETERDKERE 263



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)

Query: 83  ENERESGERQRERERERERD 102
           E ER+  ER+RER+R+R+RD
Sbjct: 255 ETERDK-ERERERDRDRDRD 273



 Score = 26.9 bits (58), Expect = 5.1
 Identities = 10/18 (55%), Positives = 15/18 (83%)

Query: 85  ERESGERQRERERERERD 102
           ERE  ER R+R+R++ER+
Sbjct: 384 EREERERDRDRDRQKERE 401



 Score = 26.9 bits (58), Expect = 5.1
 Identities = 11/21 (52%), Positives = 18/21 (85%), Gaps = 1/21 (4%)

Query: 82  TENERESGERQRERERERERD 102
           TE +R+ G+R+ E++RERE+D
Sbjct: 404 TEKDRD-GQRETEKQREREKD 423



 Score = 26.6 bits (57), Expect = 6.7
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)

Query: 81  HTENERESGERQRERERERERDWLKE 106
           H + +R   ERQR+RE+ERER   +E
Sbjct: 88  HRKRDRHR-ERQRDREKERERQTDRE 112



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 56  SQCQKNCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERD 102
           ++ ++  + +  + R   T        E ER S ER+ ER++ERER+
Sbjct: 220 TETERKRQTDRERDRQRKTEREREKQAERERAS-ERETERDKERERE 265


>gi|34878777 ring finger protein 20 [Homo sapiens]
          Length = 975

 Score = 32.3 bits (72), Expect = 0.12
 Identities = 15/24 (62%), Positives = 18/24 (75%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE   R++ERERERER+  KE
Sbjct: 566 EEERERERREKEREREREREKEKE 589



 Score = 32.0 bits (71), Expect = 0.16
 Identities = 14/24 (58%), Positives = 19/24 (79%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  E++RERERERE++  +E
Sbjct: 568 ERERERREKEREREREREKEKERE 591



 Score = 30.8 bits (68), Expect = 0.36
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 83  ENERESGERQRERERERERDWLKELCSLR 111
           E ER   ER+RERERE+E++  +E   L+
Sbjct: 570 ERERREKEREREREREKEKEREREKQKLK 598



 Score = 30.0 bits (66), Expect = 0.61
 Identities = 15/24 (62%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           E ERE  ER++E+ERERE+  LKE
Sbjct: 577 ERERER-EREKEKEREREKQKLKE 599



 Score = 26.6 bits (57), Expect = 6.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 84  NERESGERQRERERERERDWLKE 106
           +E E    +RE+ERERER+  KE
Sbjct: 565 DEEERERERREKEREREREREKE 587


>gi|223278381 ribosomal RNA processing 12 homolog isoform 2 [Homo
            sapiens]
          Length = 1236

 Score = 32.0 bits (71), Expect = 0.16
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 71   ILCTHTHTHTHTENERESGERQRERERERERDWLKE 106
            IL        + E ER  G+ QR+  R+R R WLKE
Sbjct: 1015 ILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKE 1050


>gi|223278379 ribosomal RNA processing 12 homolog isoform 1 [Homo
            sapiens]
          Length = 1297

 Score = 32.0 bits (71), Expect = 0.16
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 71   ILCTHTHTHTHTENERESGERQRERERERERDWLKE 106
            IL        + E ER  G+ QR+  R+R R WLKE
Sbjct: 1076 ILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKE 1111


>gi|155030242 WD repeat domain 60 [Homo sapiens]
          Length = 1066

 Score = 31.6 bits (70), Expect = 0.21
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 81  HTENERESGERQRERERERERD 102
           HT  E   GER R+R+RER RD
Sbjct: 74  HTAKESPRGERDRDRQRERRRD 95



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 5/33 (15%)

Query: 79  HTHTENERESGERQRERER-----ERERDWLKE 106
           HT  E+ R   +R R+RER     +RE++ LKE
Sbjct: 74  HTAKESPRGERDRDRQRERRRDAKDREKEKLKE 106


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 31.2 bits (69), Expect = 0.27
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           +  RE  ER+RERERE+ER+  KE
Sbjct: 809 QRAREEKEREREREREKEREREKE 832



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 13/23 (56%), Positives = 18/23 (78%)

Query: 85  ERESGERQRERERERERDWLKEL 107
           E +  ER+RERE+ERER+  +EL
Sbjct: 813 EEKEREREREREKEREREKEREL 835


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 31.2 bits (69), Expect = 0.27
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           +  RE  ER+RERERE+ER+  KE
Sbjct: 809 QRAREEKEREREREREKEREREKE 832



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 13/23 (56%), Positives = 18/23 (78%)

Query: 85  ERESGERQRERERERERDWLKEL 107
           E +  ER+RERE+ERER+  +EL
Sbjct: 813 EEKEREREREREKEREREKEREL 835


>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
           sapiens]
          Length = 122

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 74  THTHT--HTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126
           THTHT  HT T  ERE    QR R+RER  +        +     +L+   PG P
Sbjct: 69  THTHTGMHTQTHRERER-NTQRLRDRERRENHTHTETHTQRHTEEALKHTPPGNP 122


>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 285

 Score = 30.4 bits (67), Expect = 0.46
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 78  THTHTENERESGERQRERERERERDWLKE 106
           T    + ERE GE +R R+RERER   +E
Sbjct: 156 TEKDRDREREMGETERYRDRERERQKQRE 184



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 83  ENERESGERQRERERERERDWLKE 106
           + E+E  ER R+R++ERE+D  +E
Sbjct: 194 QREKEDRERDRDRQKEREKDRYRE 217



 Score = 27.7 bits (60), Expect = 3.0
 Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%)

Query: 82  TENER-ESGERQRERERERERD 102
           TE ER E  ERQR+R+RE++R+
Sbjct: 118 TETERQEERERQRDRKREKDRE 139



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 78  THTHTENERESGERQRERERERERDWLKEL 107
           T T  + ERE  +R R+RE++RER   +E+
Sbjct: 118 TETERQEERER-QRDRKREKDRERQRQREI 146



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 9/20 (45%), Positives = 17/20 (85%)

Query: 83  ENERESGERQRERERERERD 102
           E +RE  +R+R+R+R++ER+
Sbjct: 192 ERQREKEDRERDRDRQKERE 211



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 5/28 (17%)

Query: 85  ERESG-----ERQRERERERERDWLKEL 107
           ERE+G     ER RER+RE++RD  K +
Sbjct: 217 ERETGRDRDKERDRERQREKDRDRQKAI 244



 Score = 26.6 bits (57), Expect = 6.7
 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 19  TKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQKNCKLNHYKSRILCTHTHT 78
           T+P+S  + +R    +R    + +LR  G    P  + + ++  +    + R    H   
Sbjct: 26  TRPVSWRLAMRSQIEDRD---VLILR--GSRVAPAIIRERERQRERERQRKRAKERHREK 80

Query: 79  HTHTENERESGERQRERERERERD 102
               E +R+  +R+R+RER+R RD
Sbjct: 81  DREIEKDRDR-QRKRDRERQRWRD 103



 Score = 26.2 bits (56), Expect = 8.8
 Identities = 11/17 (64%), Positives = 14/17 (82%)

Query: 90  ERQRERERERERDWLKE 106
           ER+R+RERER+R   KE
Sbjct: 59  ERERQRERERQRKRAKE 75


>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 126

 Score = 30.4 bits (67), Expect = 0.46
 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 5/30 (16%)

Query: 74  THTHT--HTHTENERESGERQRERERERER 101
           THTHT  HT T  ER   ER  +R R+RER
Sbjct: 69  THTHTGIHTQTHRER---ERNTQRLRDRER 95


>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
           sapiens]
          Length = 124

 Score = 30.4 bits (67), Expect = 0.46
 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 5/30 (16%)

Query: 74  THTHT--HTHTENERESGERQRERERERER 101
           THTHT  HT T  ER   ER  +R R+RER
Sbjct: 69  THTHTGMHTQTHRER---ERNTQRLRDRER 95



 Score = 28.5 bits (62), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)

Query: 74  THT--HTHTHTENERESGERQRERERERERD 102
           THT  HT TH E ER +   QR R+RER  +
Sbjct: 71  THTGMHTQTHRERERNT---QRLRDRERREN 98


>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
           sapiens]
          Length = 125

 Score = 30.4 bits (67), Expect = 0.46
 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 5/30 (16%)

Query: 74  THTHT--HTHTENERESGERQRERERERER 101
           THTHT  HT T  ER   ER  +R R+RER
Sbjct: 69  THTHTGMHTQTHRER---ERNTQRLRDRER 95



 Score = 28.5 bits (62), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)

Query: 74  THT--HTHTHTENERESGERQRERERERERD 102
           THT  HT TH E ER +   QR R+RER  +
Sbjct: 71  THTGMHTQTHRERERNT---QRLRDRERREN 98


>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 126

 Score = 30.4 bits (67), Expect = 0.46
 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 5/30 (16%)

Query: 74  THTHT--HTHTENERESGERQRERERERER 101
           THTHT  HT T  ER   ER  +R R+RER
Sbjct: 69  THTHTGIHTQTHRER---ERNTQRLRDRER 95



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query: 75  HTHTHTHTENERESGE 90
           HTHTHTHT  +R + E
Sbjct: 101 HTHTHTHTHTQRHTAE 116



 Score = 28.5 bits (62), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)

Query: 74  THT--HTHTHTENERESGERQRERERERERD 102
           THT  HT TH E ER +   QR R+RER  +
Sbjct: 71  THTGIHTQTHRERERNT---QRLRDRERREN 98



 Score = 27.3 bits (59), Expect = 3.9
 Identities = 9/10 (90%), Positives = 10/10 (100%)

Query: 74  THTHTHTHTE 83
           THTHTHTHT+
Sbjct: 102 THTHTHTHTQ 111


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.135    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,443,341
Number of Sequences: 37866
Number of extensions: 230193
Number of successful extensions: 2964
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1650
Number of HSP's gapped (non-prelim): 960
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press