Guide to the Human Genome
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Search of human proteins with 169208753

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169208753 PREDICTED: similar to WHDC1-like protein 1 [Homo
sapiens]
         (130 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169208753 PREDICTED: similar to WHDC1-like protein 1 [Homo sa...   252   5e-68
gi|239745156 PREDICTED: similar to WAS protein homolog associate...   252   5e-68
gi|239745125 PREDICTED: similar to WAS protein homolog associate...   250   2e-67
gi|169208040 PREDICTED: similar to WAS protein homolog associate...   216   4e-57
gi|122937271 WAS protein homolog associated with actin, golgi me...   205   7e-54
gi|195947369 junction-mediating and regulatory protein [Homo sap...   111   2e-25
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         37   0.006
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         37   0.006
gi|40789306 zinc finger protein 365 isoform C [Homo sapiens]           34   0.037
gi|40789310 zinc finger protein 365 isoform B [Homo sapiens]           34   0.037
gi|148596972 zinc finger protein 365 isoform A [Homo sapiens]          34   0.037
gi|20270377 DPY30 domain containing 1 [Homo sapiens]                   33   0.064
gi|24308179 CTTNBP2 N-terminal like [Homo sapiens]                     32   0.11 
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi...    32   0.11 
gi|28269672 serologically defined colon cancer antigen 8 [Homo s...    32   0.11 
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]    32   0.14 
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]        32   0.14 
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi...    32   0.14 
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap...    31   0.24 
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]       31   0.24 
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]       31   0.24 
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C...    31   0.24 
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]       31   0.24 
gi|63053524 ubiquitin specific protease 1 [Homo sapiens]               31   0.24 
gi|63053522 ubiquitin specific protease 1 [Homo sapiens]               31   0.24 
gi|31543910 ubiquitin specific protease 1 [Homo sapiens]               31   0.24 
gi|237649015 EBNA1 binding protein 2 isoform 2 [Homo sapiens]          31   0.32 
gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens]          31   0.32 
gi|157837985 kazrin isoform E [Homo sapiens]                           31   0.32 
gi|65301130 kazrin isoform B [Homo sapiens]                            31   0.32 

>gi|169208753 PREDICTED: similar to WHDC1-like protein 1 [Homo
           sapiens]
          Length = 130

 Score =  252 bits (644), Expect = 5e-68
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
           MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL
Sbjct: 1   MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60

Query: 61  YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
           YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD
Sbjct: 61  YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120

Query: 121 SLKRLIKDEI 130
           SLKRLIKDEI
Sbjct: 121 SLKRLIKDEI 130


>gi|239745156 PREDICTED: similar to WAS protein homolog associated
           with actin, golgi membranes and microtubules isoform 2
           [Homo sapiens]
          Length = 130

 Score =  252 bits (644), Expect = 5e-68
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
           MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL
Sbjct: 1   MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60

Query: 61  YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
           YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD
Sbjct: 61  YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120

Query: 121 SLKRLIKDEI 130
           SLKRLIKDEI
Sbjct: 121 SLKRLIKDEI 130


>gi|239745125 PREDICTED: similar to WAS protein homolog associated
           with actin, golgi membranes and microtubules [Homo
           sapiens]
          Length = 130

 Score =  250 bits (639), Expect = 2e-67
 Identities = 129/130 (99%), Positives = 130/130 (100%)

Query: 1   MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
           MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL
Sbjct: 1   MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60

Query: 61  YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
           YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD
Sbjct: 61  YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120

Query: 121 SLKRLIKDEI 130
           SLKRLIK+EI
Sbjct: 121 SLKRLIKNEI 130


>gi|169208040 PREDICTED: similar to WAS protein homolog associated
           with actin, golgi membranes and microtubules isoform 1
           [Homo sapiens]
          Length = 131

 Score =  216 bits (550), Expect = 4e-57
 Identities = 111/113 (98%), Positives = 113/113 (100%)

Query: 17  MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 76
           MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL
Sbjct: 1   MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60

Query: 77  PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKDE 129
           PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK++
Sbjct: 61  PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEK 113


>gi|122937271 WAS protein homolog associated with actin, golgi
           membranes and microtubules [Homo sapiens]
          Length = 809

 Score =  205 bits (522), Expect = 7e-54
 Identities = 108/129 (83%), Positives = 118/129 (91%), Gaps = 1/129 (0%)

Query: 2   EASVPKYKKQLPQL-GMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
           + +V  +K+ +  L GMQKEMEQD KRFGQAAWATAIPRLEKL+LMLA+ETLQLMRAKEL
Sbjct: 297 DITVNYFKETVKALAGMQKEMEQDAKRFGQAAWATAIPRLEKLQLMLARETLQLMRAKEL 356

Query: 61  YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
            LN KRAEIQGKMEDLPEQEKN NVVDELE+QFYEIQLELYEVKFEILKNEEILLTTQLD
Sbjct: 357 CLNHKRAEIQGKMEDLPEQEKNTNVVDELEIQFYEIQLELYEVKFEILKNEEILLTTQLD 416

Query: 121 SLKRLIKDE 129
           SLKRLIK++
Sbjct: 417 SLKRLIKEK 425


>gi|195947369 junction-mediating and regulatory protein [Homo
           sapiens]
          Length = 988

 Score =  111 bits (277), Expect = 2e-25
 Identities = 54/116 (46%), Positives = 85/116 (73%)

Query: 14  QLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKM 73
           Q  +   M  D K+FG+A+WA A  R+EKL+  +++ETLQ+MRAKE+ L +++  ++ +M
Sbjct: 451 QKAVYDRMRADQKKFGKASWAAAAERMEKLQYAVSKETLQMMRAKEICLEQRKHALKEEM 510

Query: 74  EDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKDE 129
           + L    + I  +D+LE  +Y++QL+LYEV+FEILK EE+LLT QL+S+KRLI ++
Sbjct: 511 QSLRGGTEAIARLDQLEADYYDLQLQLYEVQFEILKCEELLLTAQLESIKRLISEK 566


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 8   YKKQLPQLGMQKEMEQDVK--RFGQAAWATAIPRL--EKLKLMLAQETLQLMRAKELYLN 63
           YK+Q+   G+Q EM Q ++  +F +    T   +L  E  KL   Q++L   +++E+ L 
Sbjct: 663 YKQQID--GLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQ 720

Query: 64  RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
               E+Q ++E L ++EK    +++ E+Q  +++ EL E + +  +N+      QL++  
Sbjct: 721 IN--ELQKEIEILRQEEKEKGTLEQ-EVQELQLKTELLEKQMKEKENDLQEKFAQLEAEN 777

Query: 124 RLIKDE 129
            ++KDE
Sbjct: 778 SILKDE 783



 Score = 30.0 bits (66), Expect = 0.54
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)

Query: 17   MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQE--------TLQLMRAKELYLNRKRAE 68
            +QK++E+   R  +    T   +L+ L+     E        TLQ  +       +K  E
Sbjct: 3348 LQKQLEEKHSRIVELLNETEKYKLDSLQTRQQMEKDRQVHRKTLQTEQEANTEGQKKMHE 3407

Query: 69   IQGKMEDLPEQ-EKNINVVDELEMQFYEIQLELYEVKFEILKNEE 112
            +Q K+EDL  Q E+    V +L+++   +Q  + E + + L+ EE
Sbjct: 3408 LQSKVEDLQRQLEEKRQQVYKLDLEGQRLQGIMQEFQKQELEREE 3452


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 8   YKKQLPQLGMQKEMEQDVK--RFGQAAWATAIPRL--EKLKLMLAQETLQLMRAKELYLN 63
           YK+Q+   G+Q EM Q ++  +F +    T   +L  E  KL   Q++L   +++E+ L 
Sbjct: 663 YKQQID--GLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQ 720

Query: 64  RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
               E+Q ++E L ++EK    +++ E+Q  +++ EL E + +  +N+      QL++  
Sbjct: 721 IN--ELQKEIEILRQEEKEKGTLEQ-EVQELQLKTELLEKQMKEKENDLQEKFAQLEAEN 777

Query: 124 RLIKDE 129
            ++KDE
Sbjct: 778 SILKDE 783



 Score = 30.0 bits (66), Expect = 0.54
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)

Query: 17   MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQE--------TLQLMRAKELYLNRKRAE 68
            +QK++E+   R  +    T   +L+ L+     E        TLQ  +       +K  E
Sbjct: 3340 LQKQLEEKHSRIVELLNETEKYKLDSLQTRQQMEKDRQVHRKTLQTEQEANTEGQKKMHE 3399

Query: 69   IQGKMEDLPEQ-EKNINVVDELEMQFYEIQLELYEVKFEILKNEE 112
            +Q K+EDL  Q E+    V +L+++   +Q  + E + + L+ EE
Sbjct: 3400 LQSKVEDLQRQLEEKRQQVYKLDLEGQRLQGIMQEFQKQELEREE 3444


>gi|40789306 zinc finger protein 365 isoform C [Homo sapiens]
          Length = 462

 Score = 33.9 bits (76), Expect = 0.037
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 18  QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 75
           +  + +   R  +A   T   R++KL   LAQ+T +L+  RA  + L +K+ E+Q +   
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217

Query: 76  LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 116
           L  Q      VD        ++  L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252


>gi|40789310 zinc finger protein 365 isoform B [Homo sapiens]
          Length = 333

 Score = 33.9 bits (76), Expect = 0.037
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 18  QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 75
           +  + +   R  +A   T   R++KL   LAQ+T +L+  RA  + L +K+ E+Q +   
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217

Query: 76  LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 116
           L  Q      VD        ++  L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252


>gi|148596972 zinc finger protein 365 isoform A [Homo sapiens]
          Length = 407

 Score = 33.9 bits (76), Expect = 0.037
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 18  QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 75
           +  + +   R  +A   T   R++KL   LAQ+T +L+  RA  + L +K+ E+Q +   
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217

Query: 76  LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 116
           L  Q      VD        ++  L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252


>gi|20270377 DPY30 domain containing 1 [Homo sapiens]
          Length = 177

 Score = 33.1 bits (74), Expect = 0.064
 Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 41  EKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLEL 100
           E+   ++ QE ++ ++A+EL L +++  +Q ++E    QEK    + EL+    ++  E+
Sbjct: 60  ERELALMEQEMMERLKAEELLLQQQQLALQLELE---MQEKERQRIQELQRAQEQLGKEM 116

Query: 101 YEVKFEILKNEEILLTTQ--LDSLKRL 125
                 +++NE+IL + +  LDS K L
Sbjct: 117 RMNMENLVRNEDILHSEEATLDSGKTL 143


>gi|24308179 CTTNBP2 N-terminal like [Homo sapiens]
          Length = 639

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 28/130 (21%), Positives = 67/130 (51%), Gaps = 7/130 (5%)

Query: 2   EASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELY 61
           ++ V K++K+  +L  Q  +E++  R  Q + +  +   +K     A+E  Q      L 
Sbjct: 151 KSQVKKFEKEQKKLSSQ--LEEERSRHKQLS-SMLVLECKKATNKAAEEG-QKAGELSLK 206

Query: 62  LNRKRAEIQGKMEDLP-EQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTT--Q 118
           L ++++ +    E+L  E+++ +    ++E Q  E  +E  +++ ++ + E    T   +
Sbjct: 207 LEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTKTLKEE 266

Query: 119 LDSLKRLIKD 128
           ++SLK+++KD
Sbjct: 267 MESLKKIVKD 276


>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
           sapiens]
          Length = 693

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 7   KYKKQLPQLGMQKEM----EQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYL 62
           + +KQ  +L  Q+E     E+ +++  +  W     RL K +  L ++  +L  ++   L
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438

Query: 63  NRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQL 119
           +++ AE Q   EDL  ++K+     +LE Q  E+Q +L E   E   ++   L TQL
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQEKLDEEHLEAASHQNQQLETQL 492


>gi|28269672 serologically defined colon cancer antigen 8 [Homo
           sapiens]
          Length = 713

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 18  QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLP 77
           ++    D   FG+AA A     LEKLKL   +E  ++  ++  +L    AE Q   EDL 
Sbjct: 203 KRPFSHDNADFGKAASAGEQLELEKLKLTY-EEKCEIEESQLKFLRNDLAEYQRTCEDLK 261

Query: 78  EQEKN 82
           EQ K+
Sbjct: 262 EQLKH 266


>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
          Length = 1684

 Score = 32.0 bits (71), Expect = 0.14
 Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 37   IPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEI 96
            I  L+    +L  + L++ RAK +      AE   K + + E    +N ++EL++Q  + 
Sbjct: 1075 IETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKE 1134

Query: 97   QLELYEV--KFEILK---NEEILLTTQLDSLKRLIKD 128
            + +L +   + E++K    +  L+  ++   +RL+K+
Sbjct: 1135 KKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKE 1171


>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
          Length = 495

 Score = 32.0 bits (71), Expect = 0.14
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 8/125 (6%)

Query: 9   KKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLM----LAQETLQLMRAKELYLNR 64
           +KQ  +L   ++ E D++   Q A      RL++L+L     LA E  +L + + L   +
Sbjct: 53  RKQFLRLLQNEQFELDMEEAIQKAEENK--RLKELQLKQEEKLAMELAKL-KHESLKDEK 109

Query: 65  KRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKR 124
            R +++    +L E EK +      + +  +I  E   +K+E +K +  +  T ++  KR
Sbjct: 110 MRQQVRENSIELRELEKKLKAAYMNKERAAQIA-EKDAIKYEQMKRDAEIAKTMMEEHKR 168

Query: 125 LIKDE 129
           +IK+E
Sbjct: 169 IIKEE 173


>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
           sapiens]
          Length = 693

 Score = 32.0 bits (71), Expect = 0.14
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 8/117 (6%)

Query: 7   KYKKQLPQLGMQKEM----EQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYL 62
           + +KQ  +L  Q+E     E+ +++  +  W     RL K +  L ++  +L  ++   L
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438

Query: 63  NRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQL 119
           +++ AE Q   EDL  ++K+     +LE Q  E+Q +L E   E    +   L TQL
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQEKLDEEHLEAASQQNQQLETQL 492


>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
           sapiens]
          Length = 693

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 7   KYKKQLPQLGMQKEM----EQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYL 62
           + +KQ  +L  Q+E     E+ +++  +  W     RL K +  L ++  +L  ++   L
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438

Query: 63  NRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQL 119
           +++ AE Q   EDL  ++K+     +LE Q  E+Q +L E   E        L TQL
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQEKLDEEHLEAASQRNQQLETQL 492


>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
          Length = 1415

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 20/120 (16%)

Query: 7    KYKKQLPQ--LGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQ-LMRAKELYLN 63
            K KK L +  L ++  ME+D+   G         +L++ K  L +  +Q + + +E++L 
Sbjct: 900  KDKKMLEEEVLNLKTHMEKDMVELG---------KLQEYKSELDERAVQEIEKLEEIHL- 949

Query: 64   RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
            +K+AE + ++E L       N  +   ++  E+ L+  E KF  +K     +TT+L+  K
Sbjct: 950  QKQAEYEKQLEQL-------NKDNTASLKKKELTLKDVECKFSKMKTAYEEVTTELEEFK 1002


>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
          Length = 1002

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 20/120 (16%)

Query: 7   KYKKQLPQ--LGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQ-LMRAKELYLN 63
           K KK L +  L ++  ME+D+   G         +L++ K  L +  +Q + + +E++L 
Sbjct: 793 KDKKMLEEEVLNLKTHMEKDMVELG---------KLQEYKSELDERAVQEIEKLEEIHL- 842

Query: 64  RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
           +K+AE + ++E L       N  +   ++  E+ L+  E KF  +K     +TT+L+  K
Sbjct: 843 QKQAEYEKQLEQL-------NKDNTASLKKKELTLKDVECKFSKMKTAYEEVTTELEEFK 895


>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
           isoform 1 [Homo sapiens]
          Length = 693

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 7   KYKKQLPQLGMQKEM----EQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYL 62
           + +KQ  +L  Q+E     E+ +++  +  W     RL K +  L ++  +L  ++   L
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438

Query: 63  NRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQL 119
           +++ AE Q   EDL  ++K+     +LE Q  E+Q +L E   E        L TQL
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQEKLDEEHLEAASQRNQQLETQL 492


>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
          Length = 1415

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 20/120 (16%)

Query: 7    KYKKQLPQ--LGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQ-LMRAKELYLN 63
            K KK L +  L ++  ME+D+   G         +L++ K  L +  +Q + + +E++L 
Sbjct: 900  KDKKMLEEEVLNLKTHMEKDMVELG---------KLQEYKSELDERAVQEIEKLEEIHL- 949

Query: 64   RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
            +K+AE + ++E L       N  +   ++  E+ L+  E KF  +K     +TT+L+  K
Sbjct: 950  QKQAEYEKQLEQL-------NKDNTASLKKKELTLKDVECKFSKMKTAYEEVTTELEEFK 1002


>gi|63053524 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 49  QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 91
           QET QL++ +E+   +  AE+  K+E++P  ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251


>gi|63053522 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 49  QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 91
           QET QL++ +E+   +  AE+  K+E++P  ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251


>gi|31543910 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 49  QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 91
           QET QL++ +E+   +  AE+  K+E++P  ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251


>gi|237649015 EBNA1 binding protein 2 isoform 2 [Homo sapiens]
          Length = 306

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 2   EASVPKYKKQL---PQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQET--LQLMR 56
           EA  P+ K Q    P+   Q+EM     R  QAA    +PRL +LK+   + T     M 
Sbjct: 84  EAPAPQNKDQKAVDPEDDFQREMS--FYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMA 141

Query: 57  AKELYLNRKRAEIQGKMEDLPEQEK 81
             +L + + R ++Q K   +   EK
Sbjct: 142 KSDLQMQKIRQKLQTKQAAMERSEK 166


>gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens]
          Length = 361

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 2   EASVPKYKKQL---PQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQET--LQLMR 56
           EA  P+ K Q    P+   Q+EM     R  QAA    +PRL +LK+   + T     M 
Sbjct: 139 EAPAPQNKDQKAVDPEDDFQREMS--FYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMA 196

Query: 57  AKELYLNRKRAEIQGKMEDLPEQEK 81
             +L + + R ++Q K   +   EK
Sbjct: 197 KSDLQMQKIRQKLQTKQAAMERSEK 221


>gi|157837985 kazrin isoform E [Homo sapiens]
          Length = 775

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 1   MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
           +   V + ++++  L   KEM        Q   ++ +    +L++ LAQ+  +L RAKE 
Sbjct: 78  LREEVSRLQEEVHLLRQMKEMLAKDLEESQGGKSSEVLSATELRVQLAQKEQELARAKEA 137

Query: 61  Y--LNRKRAEIQGKMEDLPEQEKNINVVDELE-------MQFYEIQLELYEVKFEILKNE 111
              +   R  ++G+  DL  Q + +    E         ++ YE   +  E   + L  E
Sbjct: 138 LQAMKADRKRLKGEKTDLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKE 197

Query: 112 EILLTTQLDSLKRLIKD 128
           + LL  +   L+R  K+
Sbjct: 198 KDLLEREKWELRRQAKE 214


>gi|65301130 kazrin isoform B [Homo sapiens]
          Length = 415

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 1   MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
           +   V + ++++  L   KEM        Q   ++ +    +L++ LAQ+  +L RAKE 
Sbjct: 72  LREEVSRLQEEVHLLRQMKEMLAKDLEESQGGKSSEVLSATELRVQLAQKEQELARAKEA 131

Query: 61  Y--LNRKRAEIQGKMEDLPEQEKNINVVDELE-------MQFYEIQLELYEVKFEILKNE 111
              +   R  ++G+  DL  Q + +    E         ++ YE   +  E   + L  E
Sbjct: 132 LQAMKADRKRLKGEKTDLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKE 191

Query: 112 EILLTTQLDSLKRLIKD 128
           + LL  +   L+R  K+
Sbjct: 192 KDLLEREKWELRRQAKE 208


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,132,755
Number of Sequences: 37866
Number of extensions: 159912
Number of successful extensions: 1012
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 926
Number of HSP's gapped (non-prelim): 227
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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