Guide to the Human Genome
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Name: EBNA1BP2 Sequence: fasta or formatted (361aa) NCBI GI: 237649012
Description:

EBNA1 binding protein 2 isoform 1

Referenced in:

Nucleus and Nucleolus
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [306aa] EBNA1 binding protein 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         28           2
 C cysteine            0.8          3           1
 D aspartate           5.8         21           2
 E glutamate           6.4         23           1
 F phenylalanine       3.3         12           1
 G glycine             7.8         28           2
 H histidine           1.1          4           1
 I isoleucine          1.1          4           1
 K lysine             13.0         47           3
 L leucine             7.8         28           2
 M methionine          2.8         10           2
 N asparagine          3.3         12           1
 P proline             5.8         21           2
 Q glutamine           6.9         25           2
 R arginine            7.8         28           2
 S serine              7.2         26           3
 T threonine           3.3         12           1
 V valine              5.0         18           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EBNA1 binding protein 2 isoform 1 
EBNA1BP2              0.837   EBNA1 binding protein 2 isoform 2 
LOC100133599          0.024   PREDICTED: hypothetical protein 
TSC1                  0.020   tuberous sclerosis 1 protein isoform 1 
TSC1                  0.020   tuberous sclerosis 1 protein isoform 4 
TSC1                  0.020   tuberous sclerosis 1 protein isoform 3 
CGN                   0.019   cingulin 
LOC100292370          0.017   PREDICTED: hypothetical protein 
TNNT3                 0.017   troponin T3, skeletal, fast isoform 3 
TNNT3                 0.017   troponin T3, skeletal, fast isoform 4 
GBP4                  0.017   guanylate binding protein 4 
GIGYF2                0.016   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.016   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.016   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.016   GRB10 interacting GYF protein 2 isoform b 
TPX2                  0.016   TPX2, microtubule-associated protein homolog 
EIF5B                 0.016   eukaryotic translation initiation factor 5B 
LOC100133599          0.014   PREDICTED: hypothetical protein 
MINK1                 0.014   misshapen/NIK-related kinase isoform 4 
MINK1                 0.014   misshapen/NIK-related kinase isoform 2 
MINK1                 0.014   misshapen/NIK-related kinase isoform 3 
MINK1                 0.014   misshapen/NIK-related kinase isoform 1 
ITSN2                 0.014   intersectin 2 isoform 3 
HNRNPR                0.014   heterogeneous nuclear ribonucleoprotein R isoform 1...
HNRNPR                0.014   heterogeneous nuclear ribonucleoprotein R isoform 2 [...
EIF3A                 0.013   eukaryotic translation initiation factor 3, subunit 1...
SFRS12                0.013   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.013   splicing factor, arginine/serine-rich 12 isoform b [...
CROP                  0.013   cisplatin resistance-associated overexpressed protei...
CROP                  0.013   cisplatin resistance-associated overexpressed protei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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