Guide to the Human Genome
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Name: EBNA1BP2 Sequence: fasta or formatted (306aa) NCBI GI: 237649015
Description:

EBNA1 binding protein 2 isoform 2

Referenced in:

Nucleus and Nucleolus
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [361aa] EBNA1 binding protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         24           2
 C cysteine            0.3          1           1
 D aspartate           6.2         19           2
 E glutamate           6.5         20           1
 F phenylalanine       3.3         10           1
 G glycine             7.2         22           2
 H histidine           1.3          4           1
 I isoleucine          1.0          3           1
 K lysine             14.4         44           3
 L leucine             8.2         25           2
 M methionine          2.9          9           2
 N asparagine          2.9          9           1
 P proline             5.2         16           2
 Q glutamine           7.8         24           2
 R arginine            8.2         25           2
 S serine              5.6         17           2
 T threonine           3.6         11           1
 V valine              4.9         15           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EBNA1 binding protein 2 isoform 2 
EBNA1BP2              1.000   EBNA1 binding protein 2 isoform 1 
LOC100133599          0.029   PREDICTED: hypothetical protein 
TSC1                  0.024   tuberous sclerosis 1 protein isoform 1 
TSC1                  0.024   tuberous sclerosis 1 protein isoform 4 
TSC1                  0.024   tuberous sclerosis 1 protein isoform 3 
CGN                   0.022   cingulin 
LOC100292370          0.020   PREDICTED: hypothetical protein 
TNNT3                 0.020   troponin T3, skeletal, fast isoform 3 
TNNT3                 0.020   troponin T3, skeletal, fast isoform 4 
GBP4                  0.020   guanylate binding protein 4 
GIGYF2                0.019   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.019   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.019   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.019   GRB10 interacting GYF protein 2 isoform b 
TPX2                  0.019   TPX2, microtubule-associated protein homolog 
EIF5B                 0.019   eukaryotic translation initiation factor 5B 
LOC100133599          0.017   PREDICTED: hypothetical protein 
MINK1                 0.017   misshapen/NIK-related kinase isoform 4 
MINK1                 0.017   misshapen/NIK-related kinase isoform 2 
MINK1                 0.017   misshapen/NIK-related kinase isoform 3 
MINK1                 0.017   misshapen/NIK-related kinase isoform 1 
ITSN2                 0.017   intersectin 2 isoform 3 
HNRNPR                0.017   heterogeneous nuclear ribonucleoprotein R isoform 1...
HNRNPR                0.017   heterogeneous nuclear ribonucleoprotein R isoform 2 [...
EIF3A                 0.015   eukaryotic translation initiation factor 3, subunit 1...
SFRS12                0.015   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.015   splicing factor, arginine/serine-rich 12 isoform b [...
CROP                  0.015   cisplatin resistance-associated overexpressed protei...
CROP                  0.015   cisplatin resistance-associated overexpressed protei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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