Guide to the Human Genome
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Name: DYDC1 Sequence: fasta or formatted (177aa) NCBI GI: 20270377
Description:

DPY30 domain containing 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         13           1
 C cysteine            0.6          1           1
 D aspartate           4.5          8           1
 E glutamate          16.4         29           2
 F phenylalanine       0.6          1           1
 G glycine             2.8          5           1
 H histidine           1.1          2           1
 I isoleucine          4.5          8           1
 K lysine              5.1          9           1
 L leucine            15.8         28           3
 M methionine          6.2         11           2
 N asparagine          3.4          6           1
 P proline             2.3          4           1
 Q glutamine           9.6         17           4
 R arginine            7.3         13           1
 S serine              3.4          6           1
 T threonine           2.3          4           1
 V valine              3.4          6           1
 W tryptophan          0.6          1           1
 Y tyrosine            2.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DPY30 domain containing 1 
DYDC2                 0.183   DPY30 domain containing 2 
TCHH                  0.082   trichohyalin 
TPM2                  0.079   tropomyosin 2 (beta) isoform 3 
ENAH                  0.076   enabled homolog isoform a 
ENAH                  0.076   enabled homolog isoform b 
GIGYF2                0.073   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.073   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.073   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.073   GRB10 interacting GYF protein 2 isoform b 
PLEC1                 0.073   plectin 1 isoform 11 
PLEC1                 0.073   plectin 1 isoform 10 
PLEC1                 0.073   plectin 1 isoform 8 
PLEC1                 0.073   plectin 1 isoform 7 
PLEC1                 0.073   plectin 1 isoform 6 
PLEC1                 0.073   plectin 1 isoform 3 
PLEC1                 0.073   plectin 1 isoform 2 
PLEC1                 0.073   plectin 1 isoform 1 
SAFB2                 0.069   scaffold attachment factor B2 
ZNF853                0.069   zinc finger protein 853 
INCENP                0.063   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.063   inner centromere protein antigens 135/155kDa isofor...
SFRS17A               0.063   DNA segment on chromosome X and Y (unique) 155 expre...
CCDC19                0.063   nasopharyngeal epithelium specific protein 1 
LOC645202             0.060   PREDICTED: hypothetical protein LOC645202 
NONO                  0.060   non-POU domain containing, octamer-binding isoform ...
NONO                  0.060   non-POU domain containing, octamer-binding isoform ...
NONO                  0.060   non-POU domain containing, octamer-binding isoform ...
NONO                  0.060   non-POU domain containing, octamer-binding isoform 1...
MAP7D2                0.060   MAP7 domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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