Search of human proteins with 169208124

Search of human proteins with 169208124

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]
         (198 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]          416   e-117
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]     300   5e-82
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]     300   5e-82
gi|29788785 tubulin, beta [Homo sapiens]                              163   1e-40
gi|5174735 tubulin, beta, 2 [Homo sapiens]                            163   1e-40
gi|29788768 tubulin, beta 2B [Homo sapiens]                           162   2e-40
gi|21361322 tubulin, beta 4 [Homo sapiens]                            162   2e-40
gi|4507729 tubulin, beta 2 [Homo sapiens]                             162   2e-40
gi|50592996 tubulin, beta, 4 [Homo sapiens]                           159   2e-39
gi|14210536 tubulin, beta 6 [Homo sapiens]                            157   7e-39
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]      156   1e-38
gi|42558279 tubulin, beta 8 [Homo sapiens]                            154   5e-38
gi|13562114 beta tubulin 1, class VI [Homo sapiens]                   131   4e-31
gi|14389309 tubulin alpha 6 [Homo sapiens]                             69   3e-12
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]                  67   8e-12
gi|17986283 tubulin, alpha 1a [Homo sapiens]                           67   8e-12
gi|17921989 tubulin, alpha 4a [Homo sapiens]                           67   8e-12
gi|156564363 tubulin, alpha 3d [Homo sapiens]                          66   2e-11
gi|17921993 tubulin, alpha 3c [Homo sapiens]                           66   2e-11
gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]           64   8e-11
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]           64   8e-11
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]           64   8e-11
gi|9507215 tubulin, alpha 8 [Homo sapiens]                             64   8e-11
gi|46409270 tubulin, alpha 3e [Homo sapiens]                           64   1e-10
gi|13376181 tubulin, alpha-like 3 [Homo sapiens]                       61   5e-10
gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens]           48   6e-06
gi|31543831 tubulin, gamma 1 [Homo sapiens]                            39   0.002
gi|7706751 tubulin, gamma 2 [Homo sapiens]                             39   0.002
gi|169171964 PREDICTED: hypothetical protein LOC100130187 [Homo ...    36   0.019
gi|169171220 PREDICTED: hypothetical protein LOC100130187 [Homo ...    36   0.019

>gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]
          Length = 198

 Score =  416 bits (1068), Expect = e-117
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ
Sbjct: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60

Query: 61  VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDSHVGHPS 120
           VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDSHVGHPS
Sbjct: 61  VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDSHVGHPS 120

Query: 121 SWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDF 180
           SWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDF
Sbjct: 121 SWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDF 180

Query: 181 ISEHRQSRTPPQKRERTQ 198
           ISEHRQSRTPPQKRERTQ
Sbjct: 181 ISEHRQSRTPPQKRERTQ 198


>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
          Length = 365

 Score =  300 bits (768), Expect = 5e-82
 Identities = 158/203 (77%), Positives = 162/203 (79%), Gaps = 11/203 (5%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ
Sbjct: 169 MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 228

Query: 61  VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS-----H 115
           VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKS    F        + +      
Sbjct: 229 VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILP 288

Query: 116 VGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEAEN 175
            GH  +    G     Q+      L   S QFPAVLCGKAVLHWYAGEGMNEMEFAEAEN
Sbjct: 289 HGHKMAVTFVGNSAATQK------LSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAEN 342

Query: 176 NMNDFISEHRQSRTPPQKRERTQ 198
           NMNDFISEHRQSRTPPQKRERTQ
Sbjct: 343 NMNDFISEHRQSRTPPQKRERTQ 365


>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
          Length = 365

 Score =  300 bits (768), Expect = 5e-82
 Identities = 158/203 (77%), Positives = 162/203 (79%), Gaps = 11/203 (5%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ
Sbjct: 169 MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 228

Query: 61  VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS-----H 115
           VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKS    F        + +      
Sbjct: 229 VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILP 288

Query: 116 VGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEAEN 175
            GH  +    G     Q+      L   S QFPAVLCGKAVLHWYAGEGMNEMEFAEAEN
Sbjct: 289 HGHKMAVTFVGNSAATQK------LSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAEN 342

Query: 176 NMNDFISEHRQSRTPPQKRERTQ 198
           NMNDFISEHRQSRTPPQKRERTQ
Sbjct: 343 NMNDFISEHRQSRTPPQKRERTQ 365


>gi|29788785 tubulin, beta [Homo sapiens]
          Length = 444

 Score =  163 bits (412), Expect = 1e-40
 Identities = 102/202 (50%), Positives = 122/202 (60%), Gaps = 8/202 (3%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT L FP QLN+DL KLAVN V FPRL FFM  FAPLTS GSQ YRALT+P+LTQQ
Sbjct: 233 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNI------HPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           VFDAKNMMAA  P     + +         MKEV+EQML+VQNK+    F     NN + 
Sbjct: 293 VFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKT 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P    +             E    +S QF A+   KA LHWY GEGM+EMEF EA
Sbjct: 352 AVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411

Query: 174 ENNMNDFISEHRQSRTPPQKRE 195
           E+NMND +SE++Q +    + E
Sbjct: 412 ESNMNDLVSEYQQYQDATAEEE 433


>gi|5174735 tubulin, beta, 2 [Homo sapiens]
          Length = 445

 Score =  163 bits (412), Expect = 1e-40
 Identities = 101/202 (50%), Positives = 122/202 (60%), Gaps = 8/202 (3%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT L FP QLN+DL KLAVN V FPRL FFM  FAPLTS GSQ YRALT+P+LTQQ
Sbjct: 233 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNI------HPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FDAKNMMAA  P     + +         MKEV+EQML+VQNK+    F     NN + 
Sbjct: 293 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKT 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P    +             E    +S QF A+   KA LHWY GEGM+EMEF EA
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411

Query: 174 ENNMNDFISEHRQSRTPPQKRE 195
           E+NMND +SE++Q +    + E
Sbjct: 412 ESNMNDLVSEYQQYQDATAEEE 433


>gi|29788768 tubulin, beta 2B [Homo sapiens]
          Length = 445

 Score =  162 bits (409), Expect = 2e-40
 Identities = 99/193 (51%), Positives = 119/193 (61%), Gaps = 8/193 (4%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT L FP QLN+DL KLAVN V FPRL FFM  FAPLTS GSQ YRALT+P+LTQQ
Sbjct: 233 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FD+KNMMAA  P     + +         MKEV+EQML+VQNK+    F     NN + 
Sbjct: 293 MFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKT 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P    +             E    +S QF A+   KA LHWY GEGM+EMEF EA
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411

Query: 174 ENNMNDFISEHRQ 186
           E+NMND +SE++Q
Sbjct: 412 ESNMNDLVSEYQQ 424


>gi|21361322 tubulin, beta 4 [Homo sapiens]
          Length = 444

 Score =  162 bits (409), Expect = 2e-40
 Identities = 100/193 (51%), Positives = 119/193 (61%), Gaps = 8/193 (4%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT L FP QLN+DL KLAVN V FPRL FFM  FAPLTS GSQ YRALT+P+LTQQ
Sbjct: 233 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNI------HPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FDAKNMMAA  P     + +         MKEV+EQMLSVQ+K+    F     NN + 
Sbjct: 293 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKN-SSYFVEWIPNNVKT 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P    +             E    +S QF A+   KA LHWY GEGM+EMEF EA
Sbjct: 352 AVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411

Query: 174 ENNMNDFISEHRQ 186
           E+NMND +SE++Q
Sbjct: 412 ESNMNDLVSEYQQ 424


>gi|4507729 tubulin, beta 2 [Homo sapiens]
          Length = 445

 Score =  162 bits (409), Expect = 2e-40
 Identities = 99/193 (51%), Positives = 119/193 (61%), Gaps = 8/193 (4%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT L FP QLN+DL KLAVN V FPRL FFM  FAPLTS GSQ YRALT+P+LTQQ
Sbjct: 233 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FD+KNMMAA  P     + +         MKEV+EQML+VQNK+    F     NN + 
Sbjct: 293 MFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKT 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P    +             E    +S QF A+   KA LHWY GEGM+EMEF EA
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411

Query: 174 ENNMNDFISEHRQ 186
           E+NMND +SE++Q
Sbjct: 412 ESNMNDLVSEYQQ 424


>gi|50592996 tubulin, beta, 4 [Homo sapiens]
          Length = 450

 Score =  159 bits (401), Expect = 2e-39
 Identities = 98/202 (48%), Positives = 122/202 (60%), Gaps = 8/202 (3%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT L FP QLN+DL KLAVN V FPRL FFM  FAPLT+ GSQ YRALT+P+LTQQ
Sbjct: 233 MSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNI------HPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FDAKNMMAA  P     + +         MKEV+EQML++Q+K+    F     NN + 
Sbjct: 293 MFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKN-SSYFVEWIPNNVKV 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P    +             E    +S QF A+   KA LHWY GEGM+EMEF EA
Sbjct: 352 AVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411

Query: 174 ENNMNDFISEHRQSRTPPQKRE 195
           E+NMND +SE++Q +    + E
Sbjct: 412 ESNMNDLVSEYQQYQDATAEEE 433


>gi|14210536 tubulin, beta 6 [Homo sapiens]
          Length = 446

 Score =  157 bits (396), Expect = 7e-39
 Identities = 96/193 (49%), Positives = 119/193 (61%), Gaps = 8/193 (4%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT L FP QLN+DL KLAVN V FPRL FFM  FAPLTS GSQ YRALT+P+LTQQ
Sbjct: 233 MSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FDA+NMMAA  P     + +         MKEV+EQML++Q+K+    F     NN + 
Sbjct: 293 MFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKN-SSYFVEWIPNNVKV 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P    +             E    +S QF A+   KA LHW+ GEGM+EMEF EA
Sbjct: 352 AVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEA 411

Query: 174 ENNMNDFISEHRQ 186
           E+NMND +SE++Q
Sbjct: 412 ESNMNDLVSEYQQ 424


>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
          Length = 434

 Score =  156 bits (395), Expect = 1e-38
 Identities = 96/193 (49%), Positives = 117/193 (60%), Gaps = 9/193 (4%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT LCFP QLN+DL KLA+N V FPRL FFM  FAPLTS GSQ YRALT+ +LTQQ
Sbjct: 233 MSGVTTCLCFPDQLNADLRKLAMNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FDAKNMMAA  P     +           M+EV+EQM ++Q+K+    F     NN + 
Sbjct: 293 MFDAKNMMAARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKN-SSYFADWFPNNVKT 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P  W               + L  +S QF A    KA LHWY GEGM+EMEF EA
Sbjct: 352 AVCDIP-PWGLKMSVTFTGNNTAVQELKRVSEQFTATFRRKAFLHWYTGEGMDEMEFTEA 410

Query: 174 ENNMNDFISEHRQ 186
           E+NMND +SE++Q
Sbjct: 411 ESNMNDLVSEYQQ 423


>gi|42558279 tubulin, beta 8 [Homo sapiens]
          Length = 444

 Score =  154 bits (389), Expect = 5e-38
 Identities = 96/205 (46%), Positives = 120/205 (58%), Gaps = 8/205 (3%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M GVTT L FP QLN+DL KLAVN V FPRL FFM  FAPLTS GSQ YRALT+ +LTQQ
Sbjct: 233 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQ 292

Query: 61  VFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FDAKNMMAA  P     +           M+EV+EQM ++Q+K+    F     NN + 
Sbjct: 293 MFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKN-SSYFADWLPNNVKT 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P    +             E    +S QF A+   KA LHWY GEGM+EMEF EA
Sbjct: 352 AVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411

Query: 174 ENNMNDFISEHRQSRTPPQKRERTQ 198
           E+NMND +SE++Q +    + E  +
Sbjct: 412 ESNMNDLVSEYQQYQDATAEEEEDE 436


>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
          Length = 451

 Score =  131 bits (329), Expect = 4e-31
 Identities = 83/193 (43%), Positives = 109/193 (56%), Gaps = 8/193 (4%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
           M G+TT L FP QLN+DL KLAVN V FPRL FFM  FAPLT+ GSQ YRAL++ +LTQQ
Sbjct: 233 MSGITTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQ 292

Query: 61  VFDAKNMMAAPP-------GLPSSMNIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
           +FDA+N MAA          +          KEV++Q+LSVQ ++    F     NN + 
Sbjct: 293 MFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRN-SSCFVEWIPNNVKV 351

Query: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
           +    P                  E  + +S  F A+   KA +HWY  EGM+  EF EA
Sbjct: 352 AVCDIPPRGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEA 411

Query: 174 ENNMNDFISEHRQ 186
           ENN++D +SE++Q
Sbjct: 412 ENNIHDLVSEYQQ 424


>gi|14389309 tubulin alpha 6 [Homo sapiens]
          Length = 449

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F +AT+AP+ S     +  LT+ ++T   F+
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFE 297

Query: 64  -AKNMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
            A  M+   P     M        ++ P  K+VN  + +++ K   Q             
Sbjct: 298 PANQMVKCDPRHGKYMACCLLYRGDVVP--KDVNAAIATIKTKRTIQFVDWCPTGFKVGI 355

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + + QR            EA   L  +F  +   +A +HWY GEGM
Sbjct: 356 NYQPPTVVP--GGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413

Query: 166 NEMEFAEAENNM 177
            E EF+EA  +M
Sbjct: 414 EEGEFSEAREDM 425


>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
          Length = 451

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F +AT+AP+ S     +  L++ ++T   F+
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFE 297

Query: 64  -AKNMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
            A  M+   P     M        ++ P  K+VN  + +++ K   Q             
Sbjct: 298 PANQMVKCDPRHGKYMACCLLYRGDVVP--KDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + + QR            EA   L  +F  +   +A +HWY GEGM
Sbjct: 356 NYQPPTVVP--GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413

Query: 166 NEMEFAEAENNM 177
            E EF+EA  +M
Sbjct: 414 EEGEFSEAREDM 425


>gi|17986283 tubulin, alpha 1a [Homo sapiens]
          Length = 451

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F +AT+AP+ S     +  L++ ++T   F+
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFE 297

Query: 64  -AKNMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
            A  M+   P     M        ++ P  K+VN  + +++ K   Q             
Sbjct: 298 PANQMVKCDPRHGKYMACCLLYRGDVVP--KDVNAAIATIKTKRTIQFVDWCPTGFKVGI 355

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + + QR            EA   L  +F  +   +A +HWY GEGM
Sbjct: 356 NYQPPTVVP--GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413

Query: 166 NEMEFAEAENNM 177
            E EF+EA  +M
Sbjct: 414 EEGEFSEAREDM 425


>gi|17921989 tubulin, alpha 4a [Homo sapiens]
          Length = 448

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F +AT+AP+ S     +  L++ ++T   F+
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFE 297

Query: 64  -AKNMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
            A  M+   P     M        ++ P  K+VN  + +++ K   Q             
Sbjct: 298 PANQMVKCDPRHGKYMACCLLYRGDVVP--KDVNAAIAAIKTKRSIQFVDWCPTGFKVGI 355

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + + QR            EA   L  +F  +   +A +HWY GEGM
Sbjct: 356 NYQPPTVVP--GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413

Query: 166 NEMEFAEAENNM 177
            E EF+EA  +M
Sbjct: 414 EEGEFSEAREDM 425


>gi|156564363 tubulin, alpha 3d [Homo sapiens]
          Length = 450

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F +AT+AP+ S     +  L++ ++T   F+
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFE 297

Query: 64  -AKNMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
            A  M+   P     M        ++ P  K+VN  + +++ K   Q             
Sbjct: 298 PANQMVKCDPRHGKYMACCMLYRGDVVP--KDVNAAIATIKTKRTIQFVDWCPTGFKVGI 355

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + + QR            EA   L  +F  +   +A +HWY GEGM
Sbjct: 356 NYQPPTVVP--GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413

Query: 166 NEMEFAEAENNM 177
            E EF+EA  ++
Sbjct: 414 EEGEFSEAREDL 425


>gi|17921993 tubulin, alpha 3c [Homo sapiens]
          Length = 450

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F +AT+AP+ S     +  L++ ++T   F+
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFE 297

Query: 64  -AKNMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
            A  M+   P     M        ++ P  K+VN  + +++ K   Q             
Sbjct: 298 PANQMVKCDPRHGKYMACCMLYRGDVVP--KDVNAAIATIKTKRTIQFVDWCPTGFKVGI 355

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + + QR            EA   L  +F  +   +A +HWY GEGM
Sbjct: 356 NYQPPTVVP--GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413

Query: 166 NEMEFAEAENNM 177
            E EF+EA  ++
Sbjct: 414 EEGEFSEAREDL 425


>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score = 63.9 bits (154), Expect = 8e-11
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 8/141 (5%)

Query: 52  LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFH 104
           L + KLT+Q+FDAKNM+AA  P     +   P       M+EV+EQ  ++QNK      H
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235

Query: 105 GMDANNGQDSHVGHPSSWPQDGGHVRRQQRGHPE-ALHGLSGQFPAVLCGKAVLHWYAGE 163
            +  N  + +    P         +              +  QF A    KA L WY+G+
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295

Query: 164 GMNEMEFAEAENNMNDFISEH 184
           GM+++EFAE E+NMN+ +SE+
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316


>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score = 63.9 bits (154), Expect = 8e-11
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 8/141 (5%)

Query: 52  LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFH 104
           L + KLT+Q+FDAKNM+AA  P     +   P       M+EV+EQ  ++QNK      H
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235

Query: 105 GMDANNGQDSHVGHPSSWPQDGGHVRRQQRGHPE-ALHGLSGQFPAVLCGKAVLHWYAGE 163
            +  N  + +    P         +              +  QF A    KA L WY+G+
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295

Query: 164 GMNEMEFAEAENNMNDFISEH 184
           GM+++EFAE E+NMN+ +SE+
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316


>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score = 63.9 bits (154), Expect = 8e-11
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 8/141 (5%)

Query: 52  LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFH 104
           L + KLT+Q+FDAKNM+AA  P     +   P       M+EV+EQ  ++QNK      H
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235

Query: 105 GMDANNGQDSHVGHPSSWPQDGGHVRRQQRGHPE-ALHGLSGQFPAVLCGKAVLHWYAGE 163
            +  N  + +    P         +              +  QF A    KA L WY+G+
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295

Query: 164 GMNEMEFAEAENNMNDFISEH 184
           GM+++EFAE E+NMN+ +SE+
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316


>gi|9507215 tubulin, alpha 8 [Homo sapiens]
          Length = 449

 Score = 63.9 bits (154), Expect = 8e-11
 Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F + T+AP+ S     +  L++ ++T   F+
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFE 297

Query: 64  AKN-MMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
             + M+   P     M        ++ P  K+VN  + +++ K   Q             
Sbjct: 298 PNSQMVKCDPRHGKYMACCMLYRGDVVP--KDVNVAIAAIKTKRTIQFVDWCPTGFKVGI 355

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + + QR            EA   L  +F  +   +A +HWY GEGM
Sbjct: 356 NYQPPTVVP--GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413

Query: 166 NEMEFAEAENNMNDFISEHRQSRTPPQKRE 195
            E EF+EA  ++     ++ +  T   + E
Sbjct: 414 EEGEFSEAREDLAALEKDYEEVGTDSFEEE 443


>gi|46409270 tubulin, alpha 3e [Homo sapiens]
          Length = 450

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 22/192 (11%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F +AT+AP+ S     +  L++ ++T   F+
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFE 297

Query: 64  -AKNMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
            A  M+   P     M        ++ P  K+VN  + +++ K   Q             
Sbjct: 298 PANQMVKCDPRHGKYMACCMLYRGDVVP--KDVNAAIATIKTKRTIQFVDWCPTGFKVGI 355

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + + QR            EA   L  +F  +    A +HWY GEGM
Sbjct: 356 NYQPPTVVP--GGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGM 413

Query: 166 NEMEFAEAENNM 177
            E EF+EA  ++
Sbjct: 414 EEGEFSEAREDL 425


>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
          Length = 446

 Score = 61.2 bits (147), Expect = 5e-10
 Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 22/192 (11%)

Query: 4   VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
           +T  L F   LN DL +   N V +PR+ F M  FAP+ S     +   ++  +T   F+
Sbjct: 245 ITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFE 304

Query: 64  AKN-MMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
           + N ++   P L   M        ++ P  KEVN  + + +++   Q             
Sbjct: 305 SSNQLVKCDPRLGKYMACCLLYRGDVVP--KEVNAAIAATKSRHSVQFVDWCPTGFKVGI 362

Query: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
           +   P+  P  GG + +  R            EA   L  +F  +   +A LHWY  EGM
Sbjct: 363 NNRPPTVMP--GGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420

Query: 166 NEMEFAEAENNM 177
            E EF EA  ++
Sbjct: 421 EEAEFLEAREDL 432


>gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens]
          Length = 83

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 138 EALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFISEHRQSRTPPQKRE 195
           E    + G F A+   K  L WY GEG +E+EF EAE++MN+ +S++++ +    K E
Sbjct: 14  ELFRCILGPFMAMFRCKDFLQWYLGEGKDEIEFTEAESSMNNLVSKYQEHQDAMAKEE 71


>gi|31543831 tubulin, gamma 1 [Homo sapiens]
          Length = 451

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGS-QLYRALTMPKLTQ 59
           M   TT L +P  +N+DL  L  + +  PRL F M  + PLT+  S    R  T+  + +
Sbjct: 236 MSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMR 295

Query: 60  QVFDAKNMMAA 70
           ++   KN+M +
Sbjct: 296 RLLQPKNVMVS 306


>gi|7706751 tubulin, gamma 2 [Homo sapiens]
          Length = 451

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 1   MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGS-QLYRALTMPKLTQ 59
           M   TT L +P  +N+DL  L  + +  PRL F M  + PLT+  S    R  T+  + +
Sbjct: 236 MSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMR 295

Query: 60  QVFDAKNMMAA 70
           ++   KN+M +
Sbjct: 296 RLLQPKNVMVS 306


>gi|169171964 PREDICTED: hypothetical protein LOC100130187 [Homo
           sapiens]
          Length = 98

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 20/84 (23%)

Query: 115 HVGHPSSWPQD---GGH---VRRQQRGHPEALHGLSGQFPAVLCG------KAVLHWYAG 162
           +V H  S+P     G H     R+QR H    H  SG    VLC        A++H    
Sbjct: 2   NVKHQFSYPDTKSLGWHKVYFSREQR-HLHQQHNHSG---VVLCHFQTQGLPALVH---- 53

Query: 163 EGMNEMEFAEAENNMNDFISEHRQ 186
           EGM+EMEF EA+ NMND +  ++Q
Sbjct: 54  EGMDEMEFTEAKCNMNDLVFAYQQ 77


>gi|169171220 PREDICTED: hypothetical protein LOC100130187 [Homo
           sapiens]
          Length = 98

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 20/84 (23%)

Query: 115 HVGHPSSWPQD---GGH---VRRQQRGHPEALHGLSGQFPAVLCG------KAVLHWYAG 162
           +V H  S+P     G H     R+QR H    H  SG    VLC        A++H    
Sbjct: 2   NVKHQFSYPDTKSLGWHKVYFSREQR-HLHQQHNHSG---VVLCHFQTQGLPALVH---- 53

Query: 163 EGMNEMEFAEAENNMNDFISEHRQ 186
           EGM+EMEF EA+ NMND +  ++Q
Sbjct: 54  EGMDEMEFTEAKCNMNDLVFAYQQ 77


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.132    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,370,030
Number of Sequences: 37866
Number of extensions: 373395
Number of successful extensions: 944
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 869
Number of HSP's gapped (non-prelim): 47
length of query: 198
length of database: 18,247,518
effective HSP length: 97
effective length of query: 101
effective length of database: 14,574,516
effective search space: 1472026116
effective search space used: 1472026116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.