LOC100130736 8564

Name: LOC100130736	Sequence: fasta or formatted (198aa)		NCBI GI: 169208124
Description: PREDICTED: similar to hCG1647990		Referenced in: Tubulins and Microtubules
Other entries for this name: alt prot [365aa] PREDICTED: similar to tubulin, beta 5 alt prot [365aa] PREDICTED: similar to tubulin, beta 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 14 2 C cysteine 2.0 4 1 D aspartate 3.0 6 1 E glutamate 5.1 10 1 F phenylalanine 6.1 12 2 G glycine 7.1 14 2 H histidine 5.1 10 1 I isoleucine 1.0 2 1 K lysine 3.5 7 1 L leucine 8.1 16 1 M methionine 6.1 12 2 N asparagine 6.1 12 2 P proline 7.1 14 2 Q glutamine 8.6 17 2 R arginine 5.6 11 2 S serine 7.1 14 2 T threonine 4.5 9 2 V valine 5.1 10 1 W tryptophan 1.0 2 1 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1647990 LOC100130736 0.703 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.703 PREDICTED: similar to tubulin, beta 5 TUBB 0.353 tubulin, beta TUBB2C 0.353 tubulin, beta, 2 TUBB2B 0.350 tubulin, beta 2B TUBB4 0.350 tubulin, beta 4 TUBB2A 0.350 tubulin, beta 2 TUBB3 0.343 tubulin, beta, 4 TUBB6 0.338 tubulin, beta 6 TUBB4Q 0.335 tubulin, beta polypeptide 4, member Q TUBB8 0.330 tubulin, beta 8 TUBB1 0.271 beta tubulin 1, class VI TUBA1C 0.113 tubulin alpha 6 TUBA1B 0.107 tubulin, alpha, ubiquitous TUBA1A 0.107 tubulin, alpha 1a TUBA4A 0.107 tubulin, alpha 4a TUBA3D 0.105 tubulin, alpha 3d TUBA3C 0.105 tubulin, alpha 3c LOC442434 0.100 PREDICTED: similar to hCG1784562 LOC442434 0.100 PREDICTED: similar to hCG1784562 LOC442434 0.100 PREDICTED: similar to hCG1784562 TUBA8 0.100 tubulin, alpha 8 TUBA3E 0.100 tubulin, alpha 3e TUBAL3 0.092 tubulin, alpha-like 3 LOC100292044 0.059 PREDICTED: similar to hCG1642465 TUBG1 0.036 tubulin, gamma 1 TUBG2 0.036 tubulin, gamma 2 LOC100130187 0.028 PREDICTED: hypothetical protein LOC100130187 LOC100130187 0.028 PREDICTED: hypothetical protein LOC100130187 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.